RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 TRIM68Q6AZZ1 485 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 NECAB1Q8N987 351 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 KRT12Q99456 494 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 MMEL1Q495T6 779 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 KANK4Q5T7N3 995 aaPredicted RBP9.76□□□□□ -0.85
SYNE3-205ENST00000557275 PPP1R2P3Q6NXS1 205 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 CCHCR1Q8TD31 782 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 FNBP1Q96RU3 617 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 SPTLC2O15270 562 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 GNA14O95837 355 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 MYL5Q02045 173 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 ZSCAN26Q16670 478 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 NBPF9Q3BBW0 867 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 SH2D4AQ9H788 454 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 EFCAB5A4FU69 1503 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 TSPY3P0CV98 308 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 TSPY8P0CW00 308 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 PACSIN2Q9UNF0 486 aaPredicted RBP9.76□□□□□ -0.85
SYNE3-205ENST00000557275 CSRNP1Q96S65 589 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 CDV3Q9UKY7 258 aaKnown RBP9.76□□□□□ -0.85
SYNE3-205ENST00000557275 RIPOR2Q9Y4F9 1068 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 UBE3BQ7Z3V4 1068 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 CDKL2Q92772 493 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 OCA2Q04671 838 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 CARD10Q9BWT7 1032 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 AMOTL2Q9Y2J4 779 aa9.76□□□□□ -0.85
SYNE3-205ENST00000557275 RNF207Q6ZRF8 634 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 ST13P4Q8IZP2 240 aaPredicted RBP9.75□□□□□ -0.85
SYNE3-205ENST00000557275 AOPEPQ8N6M6 819 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 LRRC37BQ96QE4 947 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 VPS41P49754 854 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 CCDC186Q7Z3E2 898 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 SLC26A6Q9BXS9 759 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 TMX1Q9H3N1 280 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 CCPG1Q9ULG6 757 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 MYL6BP14649 208 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 HACE1Q8IYU2 909 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 KRT2P35908 639 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 GARSP41250 739 aaKnown RBP9.75□□□□□ -0.85
SYNE3-205ENST00000557275 HDAC4P56524 1084 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 RALGAPBQ86X10 1494 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 TTLL12Q14166 644 aaPredicted RBP9.75□□□□□ -0.85
SYNE3-205ENST00000557275 NFE2L2Q16236 605 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 DDX21Q9NR30 783 aaKnown RBP eCLIP9.75□□□□□ -0.85
SYNE3-205ENST00000557275 WWC3Q9ULE0 1092 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 IPO5O00410 1097 aaKnown RBP9.75□□□□□ -0.85
SYNE3-205ENST00000557275 PSMA4P25789 261 aaKnown RBP9.75□□□□□ -0.85
SYNE3-205ENST00000557275 KRT71Q3SY84 523 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 DMRT2Q9Y5R5 561 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 APOBRQ0VD83 1088 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 DTHD1Q6ZMT9 781 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 SECISBP2LQ93073 1101 aaKnown RBP9.75□□□□□ -0.85
SYNE3-205ENST00000557275 GTF3C6Q969F1 213 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 CREB3O43889 395 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 ATICP31939 592 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 ESCO1Q5FWF5 840 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 PPWD1Q96BP3 646 aaKnown RBP9.75□□□□□ -0.85
SYNE3-205ENST00000557275 CCDC51Q96ER9 411 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 EXOC5O00471 708 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 GSTA1P08263 222 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 GSTA2P09210 222 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 JRKLQ9Y4A0 524 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 TTC1Q99614 292 aa9.75□□□□□ -0.85
SYNE3-205ENST00000557275 CNOT10Q9H9A5 744 aaKnown RBP9.75□□□□□ -0.85
SYNE3-205ENST00000557275 BCAR3O75815 825 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 BRD2P25440 801 aaKnown RBP9.74□□□□□ -0.85
SYNE3-205ENST00000557275 OGFOD1Q8N543 542 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 MYRIPQ8NFW9 859 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 UPF3AQ9H1J1 476 aaKnown RBP9.74□□□□□ -0.85
SYNE3-205ENST00000557275 KHDRBS2Q5VWX1 349 aaKnown RBP9.74□□□□□ -0.85
SYNE3-205ENST00000557275 TOM1L2Q6ZVM7 507 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 ATP6V0A4Q9HBG4 840 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 CCDC159P0C7I6 412 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 PPP2R5AQ15172 486 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 LZTFL1Q9NQ48 299 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 ERBINQ96RT1 1412 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 PYGBP11216 843 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 PDE6BP35913 854 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 ARHGDIAP52565 204 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 TBC1D8O95759 1140 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 SMC5Q8IY18 1101 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 SNX21Q969T3 373 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 PPME1Q9Y570 386 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 GJC1P36383 396 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 TMTC3Q6ZXV5 915 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 ESYT2A0FGR8 921 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 RASGRF2O14827 1237 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 KRT80Q6KB66 452 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 STX19Q8N4C7 294 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 BZW2Q9Y6E2 419 aaKnown RBP9.74□□□□□ -0.85
SYNE3-205ENST00000557275 CADPSQ9ULU8 1353 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 TMEM110-MUSTN1A8MSY1 372 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 RAB44Q7Z6P3 723 aaPredicted RBP9.74□□□□□ -0.85
SYNE3-205ENST00000557275 CCDC105Q8IYK2 499 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 WIZO95785 1651 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 POLR2BP30876 1174 aaKnown RBP9.74□□□□□ -0.85
SYNE3-205ENST00000557275 CA8P35219 290 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 C16orf87Q6PH81 154 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 TBC1D2Q9BYX2 928 aa9.74□□□□□ -0.85
SYNE3-205ENST00000557275 ARID5AQ03989 594 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms