RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 FTSJ3Q8IY81 847 aaKnown RBP23.11■■□□□ 1.29
CDKN3-209ENST00000556102 SNRKQ9NRH2 765 aa23.11■■□□□ 1.29
CDKN3-209ENST00000556102 AGTPBP1Q9UPW5 1226 aa23.11■■□□□ 1.29
CDKN3-209ENST00000556102 LOC285556D6RIA3 1793 aa23.1■■□□□ 1.29
CDKN3-209ENST00000556102 SURF6O75683 361 aaKnown RBP23.1■■□□□ 1.29
CDKN3-209ENST00000556102 NAA16Q6N069 864 aaPredicted RBP23.1■■□□□ 1.29
CDKN3-209ENST00000556102 SH3RF3Q8TEJ3 882 aaPredicted RBP23.1■■□□□ 1.29
CDKN3-209ENST00000556102 SMCR8Q8TEV9 937 aaPredicted RBP23.1■■□□□ 1.29
CDKN3-209ENST00000556102 TBC1D2Q9BYX2 928 aa23.1■■□□□ 1.29
CDKN3-209ENST00000556102 C1orf115Q9H7X2 142 aa23.1■■□□□ 1.29
CDKN3-209ENST00000556102 SIPA1L1O43166 1804 aa23.1■■□□□ 1.29
CDKN3-209ENST00000556102 BAG3O95817 575 aa23.09■■□□□ 1.29
CDKN3-209ENST00000556102 PLCG2P16885 1265 aa23.09■■□□□ 1.29
CDKN3-209ENST00000556102 ITPRIPQ8IWB1 547 aa23.09■■□□□ 1.29
CDKN3-209ENST00000556102 PROCA1Q8NCQ7 364 aaPredicted RBP23.09■■□□□ 1.29
CDKN3-209ENST00000556102 ZNF512BQ96KM6 892 aaPredicted RBP23.09■■□□□ 1.29
CDKN3-209ENST00000556102 HERC5Q9UII4 1024 aaKnown RBP23.09■■□□□ 1.29
CDKN3-209ENST00000556102 NOP58Q9Y2X3 529 aaKnown RBP23.09■■□□□ 1.29
CDKN3-209ENST00000556102 FOCADQ5VW36 1801 aa23.09■■□□□ 1.29
CDKN3-209ENST00000556102 CAP2P40123 477 aa23.08■■□□□ 1.29
CDKN3-209ENST00000556102 UBXN2AP68543 259 aa23.08■■□□□ 1.29
CDKN3-209ENST00000556102 ZNF280CQ8ND82 737 aa23.08■■□□□ 1.29
CDKN3-209ENST00000556102 SLAIN1Q8ND83 568 aa23.08■■□□□ 1.29
CDKN3-209ENST00000556102 SHISA4Q96DD7 197 aa23.08■■□□□ 1.29
CDKN3-209ENST00000556102 AATFQ9NY61 560 aaKnown RBP eCLIP23.08■■□□□ 1.29
CDKN3-209ENST00000556102 PNMA3Q9UL41 463 aa23.08■■□□□ 1.29
CDKN3-209ENST00000556102 DOCK3Q8IZD9 2030 aa23.08■■□□□ 1.28
CDKN3-209ENST00000556102 IGSF3O75054 1194 aa23.07■■□□□ 1.28
CDKN3-209ENST00000556102 CYP2E1P05181 493 aaPredicted RBP23.07■■□□□ 1.28
CDKN3-209ENST00000556102 PPP4CP60510 307 aa23.07■■□□□ 1.28
CDKN3-209ENST00000556102 SPP2Q13103 211 aa23.07■■□□□ 1.28
CDKN3-209ENST00000556102 HABP4Q5JVS0 413 aaKnown RBP23.07■■□□□ 1.28
CDKN3-209ENST00000556102 TREML2Q5T2D2 321 aa23.07■■□□□ 1.28
CDKN3-209ENST00000556102 NKX2-3Q8TAU0 364 aa23.07■■□□□ 1.28
CDKN3-209ENST00000556102 DHX36Q9H2U1 1008 aaKnown RBP23.07■■□□□ 1.28
CDKN3-209ENST00000556102 PI4KBQ9UBF8 816 aa23.07■■□□□ 1.28
CDKN3-209ENST00000556102 BIN2Q9UBW5 565 aaPredicted RBP23.07■■□□□ 1.28
CDKN3-209ENST00000556102 GABRQQ9UN88 632 aa23.07■■□□□ 1.28
CDKN3-209ENST00000556102 CEP290O15078 2479 aa23.07■■□□□ 1.28
CDKN3-209ENST00000556102 ZBTB7BO15156 539 aaPredicted RBP23.06■■□□□ 1.28
CDKN3-209ENST00000556102 GJB1P08034 283 aa23.06■■□□□ 1.28
CDKN3-209ENST00000556102 RLBP1P12271 317 aa23.06■■□□□ 1.28
CDKN3-209ENST00000556102 CCL5P13501 91 aa23.06■■□□□ 1.28
CDKN3-209ENST00000556102 RRP1BQ14684 758 aaKnown RBP23.06■■□□□ 1.28
CDKN3-209ENST00000556102 USP17L5A8MUK1 530 aa23.05■■□□□ 1.28
CDKN3-209ENST00000556102 TNPO2O14787 897 aaKnown RBP23.05■■□□□ 1.28
CDKN3-209ENST00000556102 ZAP70P43403 619 aa23.05■■□□□ 1.28
CDKN3-209ENST00000556102 ADGRA1Q86SQ6 560 aa23.05■■□□□ 1.28
CDKN3-209ENST00000556102 DBNLQ9UJU6 430 aaKnown RBP23.05■■□□□ 1.28
CDKN3-209ENST00000556102 ADCY3O60266 1144 aa23.04■■□□□ 1.28
CDKN3-209ENST00000556102 GJA8P48165 433 aa23.04■■□□□ 1.28
CDKN3-209ENST00000556102 FLT3LGP49771 235 aa23.04■■□□□ 1.28
CDKN3-209ENST00000556102 HMGCS2P54868 508 aa23.04■■□□□ 1.28
CDKN3-209ENST00000556102 PABPC4Q13310 644 aaKnown RBP eCLIP23.04■■□□□ 1.284e-9■■■■□ 25.4
CDKN3-209ENST00000556102 FAM110CQ1W6H9 321 aa23.04■■□□□ 1.28
CDKN3-209ENST00000556102 MAPKAPK5Q8IW41 473 aa23.04■■□□□ 1.28
CDKN3-209ENST00000556102 MIER1Q8N108 512 aa23.04■■□□□ 1.28
CDKN3-209ENST00000556102 ANKRD13CQ8N6S4 541 aa23.04■■□□□ 1.28
CDKN3-209ENST00000556102 TGFBRAP1Q8WUH2 860 aa23.04■■□□□ 1.28
CDKN3-209ENST00000556102 RNF208Q9H0X6 261 aa23.04■■□□□ 1.28
CDKN3-209ENST00000556102 AS3MTQ9HBK9 375 aa23.04■■□□□ 1.28
CDKN3-209ENST00000556102 FLT1P17948 1338 aa23.04■■□□□ 1.28
CDKN3-209ENST00000556102 IRF5Q13568 498 aa23.03■■□□□ 1.28
CDKN3-209ENST00000556102 SH3D19Q5HYK7 790 aa23.03■■□□□ 1.28
CDKN3-209ENST00000556102 PIH1D3Q9NQM4 214 aaKnown RBP23.03■■□□□ 1.28
CDKN3-209ENST00000556102 TLR7Q9NYK1 1049 aaKnown RBP23.03■■□□□ 1.28
CDKN3-209ENST00000556102 GCLCP48506 637 aaPredicted RBP23.02■■□□□ 1.28
CDKN3-209ENST00000556102 PXYLP1Q8TE99 480 aa23.02■■□□□ 1.28
CDKN3-209ENST00000556102 EAF2Q96CJ1 260 aaPredicted RBP23.02■■□□□ 1.28
CDKN3-209ENST00000556102 CCDC8Q9H0W5 538 aaPredicted RBP23.02■■□□□ 1.28
CDKN3-209ENST00000556102 ASNSP08243 561 aa23.01■■□□□ 1.27
CDKN3-209ENST00000556102 CEP85Q6P2H3 762 aa23.01■■□□□ 1.27
CDKN3-209ENST00000556102 METTL16Q86W50 562 aaKnown RBP23.01■■□□□ 1.27
CDKN3-209ENST00000556102 FOXP4Q8IVH2 680 aaPredicted RBP23.01■■□□□ 1.27
CDKN3-209ENST00000556102 COA7Q96BR5 231 aa23.01■■□□□ 1.27
CDKN3-209ENST00000556102 WDR18Q9BV38 432 aa23.01■■□□□ 1.27
CDKN3-209ENST00000556102 DNAJC18Q9H819 358 aa23.01■■□□□ 1.27
CDKN3-209ENST00000556102 MYH1P12882 1939 aa23■■□□□ 1.27
CDKN3-209ENST00000556102 ELNP15502 786 aa23■■□□□ 1.27
CDKN3-209ENST00000556102 UBE2Q1Q7Z7E8 422 aa23■■□□□ 1.27
CDKN3-209ENST00000556102 CRACR2BQ8N4Y2 399 aaPredicted RBP23■■□□□ 1.27
CDKN3-209ENST00000556102 TRIM34Q9BYJ4 488 aa23■■□□□ 1.27
CDKN3-209ENST00000556102 UNC93B1Q9H1C4 597 aa23■■□□□ 1.27
CDKN3-209ENST00000556102 ASCC2Q9H1I8 757 aaPredicted RBP23■■□□□ 1.27
CDKN3-209ENST00000556102 PALD1Q9ULE6 856 aa23■■□□□ 1.27
CDKN3-209ENST00000556102 INHAP05111 366 aa22.99■■□□□ 1.27
CDKN3-209ENST00000556102 CYP7A1P22680 504 aa22.99■■□□□ 1.27
CDKN3-209ENST00000556102 U2AF1L4Q8WU68 220 aaKnown RBP22.99■■□□□ 1.27
CDKN3-209ENST00000556102 GINM1Q9NU53 330 aa22.99■■□□□ 1.27
CDKN3-209ENST00000556102 ZBED9Q6R2W3 1325 aa22.99■■□□□ 1.27
CDKN3-209ENST00000556102 H0YGN5 161 aa22.98■■□□□ 1.27
CDKN3-209ENST00000556102 IDH1O75874 414 aaKnown RBP22.98■■□□□ 1.27
CDKN3-209ENST00000556102 BACE1P56817 501 aa22.98■■□□□ 1.27
CDKN3-209ENST00000556102 DYNLL1P63167 89 aaKnown RBP22.98■■□□□ 1.27
CDKN3-209ENST00000556102 MTMR2Q13614 643 aa22.98■■□□□ 1.27
CDKN3-209ENST00000556102 ERC1Q8IUD2 1116 aa22.98■■□□□ 1.27
CDKN3-209ENST00000556102 HLA-DOAP06340 250 aa22.97■■□□□ 1.27
CDKN3-209ENST00000556102 JAG1P78504 1218 aa22.97■■□□□ 1.27
CDKN3-209ENST00000556102 DIEXFQ68CQ4 756 aaKnown RBP22.97■■□□□ 1.27
CDKN3-209ENST00000556102 CERS3Q8IU89 383 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms