RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 PPP4R2Q9NY27 417 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 DCDC2CA8MYV0 355 aa2.61□□□□□ -1.99
PRPF39-208ENST00000554785 GSTT1P30711 240 aa2.61□□□□□ -1.99
PRPF39-208ENST00000554785 INPP5AQ14642 412 aa2.61□□□□□ -1.99
PRPF39-208ENST00000554785 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.61□□□□□ -1.99
PRPF39-208ENST00000554785 FBF1Q8TES7 1133 aa2.61□□□□□ -1.99
PRPF39-208ENST00000554785 BCL7CQ8WUZ0 217 aaPredicted RBP2.61□□□□□ -1.99
PRPF39-208ENST00000554785 MISP3Q96FF7 219 aa2.61□□□□□ -1.99
PRPF39-208ENST00000554785 DUSP23Q9BVJ7 150 aa2.61□□□□□ -1.99
PRPF39-208ENST00000554785 ATXN3LQ9H3M9 355 aa2.61□□□□□ -1.99
PRPF39-208ENST00000554785 PIDD1Q9HB75 910 aa2.61□□□□□ -1.99
PRPF39-208ENST00000554785 USP17L7P0C7H9 530 aa2.6□□□□□ -1.99
PRPF39-208ENST00000554785 ERCC3P19447 782 aa2.6□□□□□ -1.99
PRPF39-208ENST00000554785 ERVK-24P63145 666 aa2.6□□□□□ -1.99
PRPF39-208ENST00000554785 DNAJC14Q6Y2X3 702 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-208ENST00000554785 ZSCAN29Q8IWY8 852 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-208ENST00000554785 RNF214Q8ND24 703 aa2.6□□□□□ -1.99
PRPF39-208ENST00000554785 HEXIM2Q96MH2 286 aaKnown RBP2.6□□□□□ -1.99
PRPF39-208ENST00000554785 RAPGEFL1Q9UHV5 662 aa2.6□□□□□ -1.99
PRPF39-208ENST00000554785 PLAGL2Q9UPG8 496 aa2.6□□□□□ -1.99
PRPF39-208ENST00000554785 CNTNAP4Q9C0A0 1308 aa2.6□□□□□ -1.99
PRPF39-208ENST00000554785 ANKRD33BA6NCL7 494 aa2.6□□□□□ -1.99
PRPF39-208ENST00000554785 LDHBP07195 334 aaKnown RBP2.6□□□□□ -1.99
PRPF39-208ENST00000554785 PCNX4Q63HM2 1172 aa2.6□□□□□ -1.99
PRPF39-208ENST00000554785 ALG1LQ6GMV1 187 aa2.6□□□□□ -1.99
PRPF39-208ENST00000554785 FAM214BQ7L5A3 538 aa2.6□□□□□ -1.99
PRPF39-208ENST00000554785 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.6□□□□□ -1.997e-10■■■□□ 15.3
PRPF39-208ENST00000554785 TMEM40Q8WWA1 233 aa2.6□□□□□ -1.99
PRPF39-208ENST00000554785 ACSBG1Q96GR2 724 aa2.6□□□□□ -1.99
PRPF39-208ENST00000554785 C12orf49Q9H741 205 aa2.6□□□□□ -1.99
PRPF39-208ENST00000554785 FAM53CQ9NYF3 392 aa2.6□□□□□ -1.99
PRPF39-208ENST00000554785 CD8BP10966 210 aa2.59□□□□□ -1.99
PRPF39-208ENST00000554785 BUD31P41223 144 aaPredicted RBP2.59□□□□□ -1.99
PRPF39-208ENST00000554785 OXCT1P55809 520 aa2.59□□□□□ -1.99
PRPF39-208ENST00000554785 LLGL2Q6P1M3 1020 aa2.59□□□□□ -1.99
PRPF39-208ENST00000554785 ATG4DQ86TL0 474 aaPredicted RBP2.59□□□□□ -1.99
PRPF39-208ENST00000554785 KSR1Q8IVT5 923 aa2.59□□□□□ -1.99
PRPF39-208ENST00000554785 TOP6BLQ8N6T0 577 aa2.59□□□□□ -1.99
PRPF39-208ENST00000554785 FLCNQ8NFG4 579 aa2.59□□□□□ -1.99
PRPF39-208ENST00000554785 GAL3ST3Q96A11 431 aa2.59□□□□□ -1.99
PRPF39-208ENST00000554785 SRCIN1Q9C0H9 1055 aa2.59□□□□□ -1.99
PRPF39-208ENST00000554785 FBRSQ9HAH7 460 aa2.59□□□□□ -1.99
PRPF39-208ENST00000554785 ADAMTS6Q9UKP5 1117 aa2.59□□□□□ -1.99
PRPF39-208ENST00000554785 PCOLCE2Q9UKZ9 415 aa2.59□□□□□ -1.99
PRPF39-208ENST00000554785 PCDHA4Q9UN74 947 aa2.59□□□□□ -1.99
PRPF39-208ENST00000554785 RB1CC1Q8TDY2 1594 aa2.59□□□□□ -1.99
PRPF39-208ENST00000554785 TRIM37O94972 964 aa2.59□□□□□ -2
PRPF39-208ENST00000554785 ZNF865P0CJ78 1059 aaPredicted RBP2.59□□□□□ -2
PRPF39-208ENST00000554785 TAGLNQ01995 201 aaKnown RBP2.59□□□□□ -2
PRPF39-208ENST00000554785 NKG7Q16617 165 aa2.59□□□□□ -2
PRPF39-208ENST00000554785 CYP27C1Q4G0S4 372 aa2.59□□□□□ -2
PRPF39-208ENST00000554785 ZBTB37Q5TC79 503 aa2.59□□□□□ -2
PRPF39-208ENST00000554785 MEI1Q5TIA1 1274 aa2.59□□□□□ -2
PRPF39-208ENST00000554785 LRFN4Q6PJG9 635 aa2.59□□□□□ -2
PRPF39-208ENST00000554785 SIAH1Q8IUQ4 282 aa2.59□□□□□ -2
PRPF39-208ENST00000554785 PLPPR2Q96GM1 343 aa2.59□□□□□ -2
PRPF39-208ENST00000554785 FAM161BQ96MY7 647 aa2.59□□□□□ -2
PRPF39-208ENST00000554785 DUSP9Q99956 384 aaKnown RBP2.59□□□□□ -2
PRPF39-208ENST00000554785 EMILIN2Q9BXX0 1053 aa2.59□□□□□ -2
PRPF39-208ENST00000554785 SSU72Q9NP77 194 aaKnown RBP2.59□□□□□ -2
PRPF39-208ENST00000554785 FAM8A1Q9UBU6 413 aa2.59□□□□□ -2
PRPF39-208ENST00000554785 PPM1HQ9ULR3 514 aa2.59□□□□□ -2
PRPF39-208ENST00000554785 PCDHB5Q9Y5E4 795 aa2.59□□□□□ -2
PRPF39-208ENST00000554785 EOMESO95936 686 aa2.58□□□□□ -2
PRPF39-208ENST00000554785 ITIH2P19823 946 aa2.58□□□□□ -2
PRPF39-208ENST00000554785 NPAS4Q8IUM7 802 aa2.58□□□□□ -2
PRPF39-208ENST00000554785 RIN3Q8TB24 985 aa2.58□□□□□ -2
PRPF39-208ENST00000554785 ZSCAN18Q8TBC5 510 aaPredicted RBP2.58□□□□□ -2
PRPF39-208ENST00000554785 NETO1Q8TDF5 533 aa2.58□□□□□ -2
PRPF39-208ENST00000554785 ANKRD24Q8TF21 1146 aa2.58□□□□□ -2
PRPF39-208ENST00000554785 FAM84AQ96KN4 292 aa2.58□□□□□ -2
PRPF39-208ENST00000554785 TOX2Q96NM4 488 aa2.58□□□□□ -2
PRPF39-208ENST00000554785 PPP1R16BQ96T49 567 aa2.58□□□□□ -2
PRPF39-208ENST00000554785 CEP44Q9C0F1 390 aa2.58□□□□□ -2
PRPF39-208ENST00000554785 PRDM7Q9NQW5 492 aa2.58□□□□□ -2
PRPF39-208ENST00000554785 SPG7Q9UQ90 795 aa2.58□□□□□ -2
PRPF39-208ENST00000554785 SLC5A6Q9Y289 635 aa2.58□□□□□ -2
PRPF39-208ENST00000554785 PRAMEF27A3QJZ7 478 aa2.57□□□□□ -2
PRPF39-208ENST00000554785 PRR33A8MZF0 331 aa2.57□□□□□ -2
PRPF39-208ENST00000554785 GIPC1O14908 333 aa2.57□□□□□ -2
PRPF39-208ENST00000554785 GNA15P30679 374 aa2.57□□□□□ -2
PRPF39-208ENST00000554785 HNRNPUQ00839 825 aaKnown RBP eCLIP2.57□□□□□ -2
PRPF39-208ENST00000554785 ATP2B2Q01814 1243 aa2.57□□□□□ -2
PRPF39-208ENST00000554785 SEPT6Q14141 434 aa2.57□□□□□ -2
PRPF39-208ENST00000554785 SLBPQ14493 270 aaKnown RBP eCLIP2.57□□□□□ -2
PRPF39-208ENST00000554785 NKPD1Q17RQ9 610 aa2.57□□□□□ -2
PRPF39-208ENST00000554785 ZNF792Q3KQV3 632 aa2.57□□□□□ -2
PRPF39-208ENST00000554785 TTBK2Q6IQ55 1244 aa2.57□□□□□ -2
PRPF39-208ENST00000554785 CYFIP1Q7L576 1253 aa2.57□□□□□ -2
PRPF39-208ENST00000554785 NPM2Q86SE8 214 aaKnown RBP2.57□□□□□ -2
PRPF39-208ENST00000554785 BCL2L13Q9BXK5 485 aa2.57□□□□□ -2
PRPF39-208ENST00000554785 PRDM10Q9NQV6 1147 aa2.57□□□□□ -2
PRPF39-208ENST00000554785 CYP8B1Q9UNU6 501 aa2.57□□□□□ -2
PRPF39-208ENST00000554785 TTF2Q9UNY4 1162 aaKnown RBP2.57□□□□□ -2
PRPF39-208ENST00000554785 F6X3S4 739 aa2.57□□□□□ -2
PRPF39-208ENST00000554785 FANCGO15287 622 aa2.57□□□□□ -2
PRPF39-208ENST00000554785 PRPF40AO75400 957 aaKnown RBP2.57□□□□□ -2
PRPF39-208ENST00000554785 SLITRK5O94991 958 aa2.57□□□□□ -2
PRPF39-208ENST00000554785 PAPLNO95428 1278 aa2.57□□□□□ -2
PRPF39-208ENST00000554785 CEACAM5P06731 702 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms