RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 CDK8P49336 464 aa5.2□□□□□ -1.58
SCFD1-213ENST00000554776 CDK5R2Q13319 367 aa5.2□□□□□ -1.58
SCFD1-213ENST00000554776 TSNAXIP1Q2TAA8 658 aa5.2□□□□□ -1.58
SCFD1-213ENST00000554776 WIPI1Q5MNZ9 446 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-213ENST00000554776 ZNF765Q7L2R6 523 aa5.2□□□□□ -1.58
SCFD1-213ENST00000554776 UBE3DQ7Z6J8 389 aa5.2□□□□□ -1.58
SCFD1-213ENST00000554776 CCDC84Q86UT8 332 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-213ENST00000554776 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.2□□□□□ -1.58
SCFD1-213ENST00000554776 RHOVQ96L33 236 aa5.2□□□□□ -1.58
SCFD1-213ENST00000554776 SSU72Q9NP77 194 aaKnown RBP5.2□□□□□ -1.58
SCFD1-213ENST00000554776 PICK1Q9NRD5 415 aa5.2□□□□□ -1.58
SCFD1-213ENST00000554776 PRAMEF27A3QJZ7 478 aa5.19□□□□□ -1.58
SCFD1-213ENST00000554776 E9PSI1 815 aa5.19□□□□□ -1.58
SCFD1-213ENST00000554776 GFRA2O00451 464 aa5.19□□□□□ -1.58
SCFD1-213ENST00000554776 HOXA10P31260 410 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-213ENST00000554776 FANCCQ00597 558 aa5.19□□□□□ -1.58
SCFD1-213ENST00000554776 LMNB2Q03252 620 aa5.19□□□□□ -1.58
SCFD1-213ENST00000554776 DUSP27Q5VZP5 1158 aa5.19□□□□□ -1.58
SCFD1-213ENST00000554776 DTX1Q86Y01 620 aa5.19□□□□□ -1.58
SCFD1-213ENST00000554776 RELL1Q8IUW5 271 aa5.19□□□□□ -1.58
SCFD1-213ENST00000554776 TMEM87AQ8NBN3 555 aa5.19□□□□□ -1.58
SCFD1-213ENST00000554776 KCT2Q8NC54 265 aa5.19□□□□□ -1.58
SCFD1-213ENST00000554776 ZNF507Q8TCN5 953 aa5.19□□□□□ -1.58
SCFD1-213ENST00000554776 TMEM74Q96NL1 305 aa5.19□□□□□ -1.58
SCFD1-213ENST00000554776 WNT10AQ9GZT5 417 aa5.19□□□□□ -1.58
SCFD1-213ENST00000554776 PCMTD2Q9NV79 361 aa5.19□□□□□ -1.58
SCFD1-213ENST00000554776 TACC3Q9Y6A5 838 aa5.19□□□□□ -1.58
SCFD1-213ENST00000554776 F6X3S4 739 aa5.18□□□□□ -1.58
SCFD1-213ENST00000554776 FAM87AP0C7U9 286 aa5.18□□□□□ -1.58
SCFD1-213ENST00000554776 RPL6Q02878 288 aaKnown RBP5.18□□□□□ -1.58
SCFD1-213ENST00000554776 CAMK2GQ13555 558 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-213ENST00000554776 PWP1Q13610 501 aa5.18□□□□□ -1.58
SCFD1-213ENST00000554776 MSMPQ1L6U9 139 aa5.18□□□□□ -1.58
SCFD1-213ENST00000554776 CYP27C1Q4G0S4 372 aa5.18□□□□□ -1.58
SCFD1-213ENST00000554776 XP32Q5T750 250 aa5.18□□□□□ -1.58
SCFD1-213ENST00000554776 DUSP23Q9BVJ7 150 aa5.18□□□□□ -1.58
SCFD1-213ENST00000554776 COPRSQ9NQ92 184 aa5.18□□□□□ -1.58
SCFD1-213ENST00000554776 METTL5Q9NRN9 209 aaKnown RBP5.18□□□□□ -1.58
SCFD1-213ENST00000554776 SCAMP3O14828 347 aaKnown RBP5.17□□□□□ -1.58
SCFD1-213ENST00000554776 CYP26A1O43174 497 aa5.17□□□□□ -1.58
SCFD1-213ENST00000554776 LEFTY1O75610 366 aa5.17□□□□□ -1.58
SCFD1-213ENST00000554776 PF4P02776 101 aa5.17□□□□□ -1.58
SCFD1-213ENST00000554776 GBP2P32456 591 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-213ENST00000554776 ZNF76P36508 570 aa5.17□□□□□ -1.58
SCFD1-213ENST00000554776 CAP2P40123 477 aa5.17□□□□□ -1.58
SCFD1-213ENST00000554776 BNC2Q6ZN30 1099 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-213ENST00000554776 CDC37L1Q7L3B6 337 aa5.17□□□□□ -1.58
SCFD1-213ENST00000554776 HS2ST1Q7LGA3 356 aa5.17□□□□□ -1.58
SCFD1-213ENST00000554776 JARID2Q92833 1246 aaPredicted RBP5.17□□□□□ -1.58
SCFD1-213ENST00000554776 FBRSQ9HAH7 460 aa5.17□□□□□ -1.58
SCFD1-213ENST00000554776 KBTBD4Q9NVX7 518 aa5.17□□□□□ -1.58
SCFD1-213ENST00000554776 FAM221AA4D161 298 aa5.16□□□□□ -1.58
SCFD1-213ENST00000554776 CILPO75339 1184 aa5.16□□□□□ -1.58
SCFD1-213ENST00000554776 LRIG2O94898 1065 aa5.16□□□□□ -1.58
SCFD1-213ENST00000554776 GARTP22102 1010 aa5.16□□□□□ -1.58
SCFD1-213ENST00000554776 GRK4P32298 578 aa5.16□□□□□ -1.58
SCFD1-213ENST00000554776 ETF1P62495 437 aaKnown RBP5.16□□□□□ -1.58
SCFD1-213ENST00000554776 SLBPQ14493 270 aaKnown RBP eCLIP5.16□□□□□ -1.58
SCFD1-213ENST00000554776 ARMCX6Q7L4S7 300 aa5.16□□□□□ -1.58
SCFD1-213ENST00000554776 METTL16Q86W50 562 aaKnown RBP5.16□□□□□ -1.58
SCFD1-213ENST00000554776 TOP6BLQ8N6T0 577 aa5.16□□□□□ -1.58
SCFD1-213ENST00000554776 GATAD2BQ8WXI9 593 aa5.16□□□□□ -1.58
SCFD1-213ENST00000554776 PRDM10Q9NQV6 1147 aa5.16□□□□□ -1.58
SCFD1-213ENST00000554776 KCNQ5Q9NR82 932 aa5.16□□□□□ -1.58
SCFD1-213ENST00000554776 GGT7Q9UJ14 662 aa5.16□□□□□ -1.58
SCFD1-213ENST00000554776 F13A1P00488 732 aa5.15□□□□□ -1.59
SCFD1-213ENST00000554776 PRNPP04156 253 aa5.15□□□□□ -1.59
SCFD1-213ENST00000554776 HDLBPQ00341 1268 aaKnown RBP5.15□□□□□ -1.59
SCFD1-213ENST00000554776 NKG7Q16617 165 aa5.15□□□□□ -1.59
SCFD1-213ENST00000554776 DIEXFQ68CQ4 756 aaKnown RBP5.15□□□□□ -1.59
SCFD1-213ENST00000554776 FAM214BQ7L5A3 538 aa5.15□□□□□ -1.59
SCFD1-213ENST00000554776 HID1Q8IV36 788 aa5.15□□□□□ -1.59
SCFD1-213ENST00000554776 FOXQ1Q9C009 403 aa5.15□□□□□ -1.59
SCFD1-213ENST00000554776 LRRC4CQ9HCJ2 640 aa5.15□□□□□ -1.59
SCFD1-213ENST00000554776 ZC3H7BQ9UGR2 993 aaKnown RBP5.15□□□□□ -1.59
SCFD1-213ENST00000554776 MINDY4BA8MYZ0 360 aa5.14□□□□□ -1.59
SCFD1-213ENST00000554776 ADAMTS4O75173 837 aa5.14□□□□□ -1.59
SCFD1-213ENST00000554776 BPNT1O95861 308 aa5.14□□□□□ -1.59
SCFD1-213ENST00000554776 FAM160A1Q05DH4 1040 aa5.14□□□□□ -1.59
SCFD1-213ENST00000554776 SNAP47Q5SQN1 464 aa5.14□□□□□ -1.59
SCFD1-213ENST00000554776 NBPF11Q86T75 865 aa5.14□□□□□ -1.59
SCFD1-213ENST00000554776 GOLM1Q8NBJ4 401 aa5.14□□□□□ -1.59
SCFD1-213ENST00000554776 RNF34Q969K3 372 aa5.14□□□□□ -1.59
SCFD1-213ENST00000554776 MKNK2Q9HBH9 465 aa5.14□□□□□ -1.59
SCFD1-213ENST00000554776 BSDC1Q9NW68 430 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-213ENST00000554776 ADAM30Q9UKF2 790 aa5.14□□□□□ -1.59
SCFD1-213ENST00000554776 U3KQE9 123 aa5.14□□□□□ -1.59
SCFD1-213ENST00000554776 GREM1O60565 184 aa5.13□□□□□ -1.59
SCFD1-213ENST00000554776 SLITRK5O94991 958 aa5.13□□□□□ -1.59
SCFD1-213ENST00000554776 EOMESO95936 686 aa5.13□□□□□ -1.59
SCFD1-213ENST00000554776 CST3P01034 146 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-213ENST00000554776 PGRP06401 933 aa5.13□□□□□ -1.59
SCFD1-213ENST00000554776 EIF4A3P38919 411 aaKnown RBP5.13□□□□□ -1.59
SCFD1-213ENST00000554776 PDE4BQ07343 736 aa5.13□□□□□ -1.59
SCFD1-213ENST00000554776 MPP2Q14168 576 aa5.13□□□□□ -1.59
SCFD1-213ENST00000554776 ZNF394Q53GI3 561 aa5.13□□□□□ -1.59
SCFD1-213ENST00000554776 FBXL19Q6PCT2 694 aa5.13□□□□□ -1.59
SCFD1-213ENST00000554776 FAM196AQ6ZSG2 479 aa5.13□□□□□ -1.59
SCFD1-213ENST00000554776 MRPL41Q8IXM3 137 aaKnown RBP5.13□□□□□ -1.59
SCFD1-213ENST00000554776 FAM181AQ8N9Y4 354 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms