RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 DAAM1Q9Y4D1 1078 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 PLXNB2O15031 1838 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 COL4A5P29400 1685 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 A0A1B0GUL7 405 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 SOCS7O14512 581 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 KLRC4O43908 158 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 SHOX2O60902 331 aaPredicted RBP4.02□□□□□ -1.77
SEC23A-207ENST00000554615 SLFN14P0C7P3 912 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 CLCN6P51797 869 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 ATP2C1P98194 919 aaPredicted RBP4.02□□□□□ -1.77
SEC23A-207ENST00000554615 ARL6IP4Q66PJ3 421 aaKnown RBP4.02□□□□□ -1.77
SEC23A-207ENST00000554615 RASGRP2Q7LDG7 609 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 CERS3Q8IU89 383 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 CACTINQ8WUQ7 758 aaKnown RBP4.02□□□□□ -1.77
SEC23A-207ENST00000554615 LPIN2Q92539 896 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 CCDC51Q96ER9 411 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 XAGE2Q96GT9 111 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 USP28Q96RU2 1077 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 SMC3Q9UQE7 1217 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 FHOD1Q9Y613 1164 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 A0A1W2PQC6 194 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 PPP1R3GB7ZBB8 358 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 hCG_1984214I3L0E3 225 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 FGAP02671 866 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 PRLRP16471 622 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 CTDSPL2Q05D32 466 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 TEFQ10587 303 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 SLC35G1Q2M3R5 365 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 ASTE1Q2TB18 679 aaPredicted RBP4.02□□□□□ -1.77
SEC23A-207ENST00000554615 ZNF568Q3ZCX4 644 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 LRRC24Q50LG9 513 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 ESCO1Q5FWF5 840 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 APOA5Q6Q788 366 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 ZNF713Q8N859 430 aaPredicted RBP4.02□□□□□ -1.77
SEC23A-207ENST00000554615 BRF1Q92994 677 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 IQCDQ96DY2 449 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 CHAMP1Q96JM3 812 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 DNAJC7Q99615 494 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 MYD88Q99836 296 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 NUP62CLQ9H1M0 184 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 ANO2Q9NQ90 1003 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 MYO1AQ9UBC5 1043 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 PARP3Q9Y6F1 533 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 FAM205AQ6ZU69 1335 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 VWA3AA6NCI4 1184 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 TADA3O75528 432 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 IL1R1P14778 569 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 ZKSCAN1P17029 563 aaPredicted RBP4.02□□□□□ -1.77
SEC23A-207ENST00000554615 CDC27P30260 824 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 LRRFIP1Q32MZ4 808 aaKnown RBP4.02□□□□□ -1.77
SEC23A-207ENST00000554615 WDR93Q6P2C0 686 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 CWC27Q6UX04 472 aaKnown RBP4.02□□□□□ -1.77
SEC23A-207ENST00000554615 CCDC112Q8NEF3 446 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 ZNF396Q96N95 335 aaPredicted RBP4.02□□□□□ -1.77
SEC23A-207ENST00000554615 PUS7LQ9H0K6 701 aaKnown RBP4.02□□□□□ -1.77
SEC23A-207ENST00000554615 CNNM2Q9H8M5 875 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 IL1RAPL2Q9NP60 686 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 MYH10P35580 1976 aa4.02□□□□□ -1.77
SEC23A-207ENST00000554615 ZNF106Q9H2Y7 1883 aaKnown RBP4.01□□□□□ -1.77
SEC23A-207ENST00000554615 ELL2O00472 640 aaPredicted RBP4.01□□□□□ -1.77
SEC23A-207ENST00000554615 PJA2O43164 708 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 JAK2O60674 1132 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 KIF20AO95235 890 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 IFIT2P09913 472 aaKnown RBP4.01□□□□□ -1.77
SEC23A-207ENST00000554615 HOXA10P31260 410 aaPredicted RBP4.01□□□□□ -1.77
SEC23A-207ENST00000554615 LMNB2Q03252 620 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 TROAPQ12815 778 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 G3BP1Q13283 466 aaKnown RBP eCLIP4.01□□□□□ -1.774e-7■■■□□ 16.9
SEC23A-207ENST00000554615 PUM3Q15397 648 aaKnown RBP4.01□□□□□ -1.77
SEC23A-207ENST00000554615 IL17AQ16552 155 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 GALNT17Q6IS24 598 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 RCSD1Q6JBY9 416 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 CCDC83Q8IWF9 413 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 TC2NQ8N9U0 490 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 KIF18AQ8NI77 898 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 SEC14L1Q92503 715 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 MRPS27Q92552 414 aaKnown RBP4.01□□□□□ -1.77
SEC23A-207ENST00000554615 ERO1AQ96HE7 468 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 BSDC1Q9NW68 430 aaPredicted RBP4.01□□□□□ -1.77
SEC23A-207ENST00000554615 OGFRQ9NZT2 677 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 LAD1O00515 517 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 NEXNQ0ZGT2 675 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 UBE4AQ14139 1066 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 CCDC142Q17RM4 750 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 CRACR2BQ8N4Y2 399 aaPredicted RBP4.01□□□□□ -1.77
SEC23A-207ENST00000554615 MTRQ99707 1265 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 SRRTQ9BXP5 876 aaKnown RBP4.01□□□□□ -1.77
SEC23A-207ENST00000554615 VIPAS39Q9H9C1 493 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 MKNK2Q9HBH9 465 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 ANGEL1Q9UNK9 670 aaKnown RBP4.01□□□□□ -1.77
SEC23A-207ENST00000554615 MRFAP1Q9Y605 127 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 CHD5Q8TDI0 1954 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 CYP3A7-CYP3A51PA0A087WV96 503 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 PMM2O15305 246 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 DHX16O60231 1041 aaKnown RBP4.01□□□□□ -1.77
SEC23A-207ENST00000554615 CYP3A7P24462 503 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 ARHGAP25P42331 645 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 MAP3K10Q02779 954 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 GABPAQ06546 454 aa4.01□□□□□ -1.77
SEC23A-207ENST00000554615 VPS72Q15906 364 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms