RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 BAG3O95817 575 aa8.1□□□□□ -1.11
SLIRP-203ENST00000554074 BCRP11274 1271 aa8.1□□□□□ -1.11
SLIRP-203ENST00000554074 HOXD10P28358 340 aa8.1□□□□□ -1.11
SLIRP-203ENST00000554074 PICALMQ13492 652 aa8.1□□□□□ -1.11
SLIRP-203ENST00000554074 TTC39AQ5SRH9 613 aa8.1□□□□□ -1.11
SLIRP-203ENST00000554074 NAA16Q6N069 864 aaPredicted RBP8.1□□□□□ -1.11
SLIRP-203ENST00000554074 CERS3Q8IU89 383 aa8.1□□□□□ -1.11
SLIRP-203ENST00000554074 ERC1Q8IUD2 1116 aa8.1□□□□□ -1.11
SLIRP-203ENST00000554074 DBNDD2Q9BQY9 259 aa8.1□□□□□ -1.11
SLIRP-203ENST00000554074 TMEM106CQ9BVX2 250 aa8.1□□□□□ -1.11
SLIRP-203ENST00000554074 ARHGAP39Q9C0H5 1083 aa8.1□□□□□ -1.11
SLIRP-203ENST00000554074 DHX36Q9H2U1 1008 aaKnown RBP8.1□□□□□ -1.11
SLIRP-203ENST00000554074 SRRDQ9UH36 339 aa8.1□□□□□ -1.11
SLIRP-203ENST00000554074 CPA4Q9UI42 421 aa8.1□□□□□ -1.11
SLIRP-203ENST00000554074 DBNLQ9UJU6 430 aaKnown RBP8.1□□□□□ -1.11
SLIRP-203ENST00000554074 CEP290O15078 2479 aa8.1□□□□□ -1.11
SLIRP-203ENST00000554074 CYP2E1P05181 493 aaPredicted RBP8.09□□□□□ -1.11
SLIRP-203ENST00000554074 CAP2P40123 477 aa8.09□□□□□ -1.11
SLIRP-203ENST00000554074 PSMC4P43686 418 aa8.09□□□□□ -1.11
SLIRP-203ENST00000554074 HSP90AB4PQ58FF6 505 aa8.09□□□□□ -1.11
SLIRP-203ENST00000554074 CEP85Q6P2H3 762 aa8.09□□□□□ -1.11
SLIRP-203ENST00000554074 METTL16Q86W50 562 aaKnown RBP8.09□□□□□ -1.11
SLIRP-203ENST00000554074 TEX11Q8IYF3 940 aa8.09□□□□□ -1.11
SLIRP-203ENST00000554074 PROCA1Q8NCQ7 364 aaPredicted RBP8.09□□□□□ -1.11
SLIRP-203ENST00000554074 TRIM47Q96LD4 638 aa8.09□□□□□ -1.11
SLIRP-203ENST00000554074 C1orf115Q9H7X2 142 aa8.09□□□□□ -1.11
SLIRP-203ENST00000554074 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.09□□□□□ -1.11
SLIRP-203ENST00000554074 GINM1Q9NU53 330 aa8.09□□□□□ -1.11
SLIRP-203ENST00000554074 PI4KBQ9UBF8 816 aa8.09□□□□□ -1.11
SLIRP-203ENST00000554074 AGTPBP1Q9UPW5 1226 aa8.09□□□□□ -1.11
SLIRP-203ENST00000554074 BRCA2P51587 3418 aa8.09□□□□□ -1.12
SLIRP-203ENST00000554074 PLXNB2O15031 1838 aa8.08□□□□□ -1.12
SLIRP-203ENST00000554074 BAZ2AQ9UIF9 1905 aaKnown RBP8.08□□□□□ -1.12
SLIRP-203ENST00000554074 CYP2C8P10632 490 aa8.08□□□□□ -1.12
SLIRP-203ENST00000554074 OSBPP22059 807 aa8.08□□□□□ -1.12
SLIRP-203ENST00000554074 CTGFP29279 349 aa8.08□□□□□ -1.12
SLIRP-203ENST00000554074 ZAP70P43403 619 aa8.08□□□□□ -1.12
SLIRP-203ENST00000554074 FCGRTP55899 365 aa8.08□□□□□ -1.12
SLIRP-203ENST00000554074 SH3D19Q5HYK7 790 aa8.08□□□□□ -1.12
SLIRP-203ENST00000554074 GADL1Q6ZQY3 521 aa8.08□□□□□ -1.12
SLIRP-203ENST00000554074 FOXP4Q8IVH2 680 aaPredicted RBP8.08□□□□□ -1.12
SLIRP-203ENST00000554074 ZNF280CQ8ND82 737 aa8.08□□□□□ -1.12
SLIRP-203ENST00000554074 SH3RF3Q8TEJ3 882 aaPredicted RBP8.08□□□□□ -1.12
SLIRP-203ENST00000554074 EAF2Q96CJ1 260 aaPredicted RBP8.08□□□□□ -1.12
SLIRP-203ENST00000554074 SNRKQ9NRH2 765 aa8.08□□□□□ -1.12
SLIRP-203ENST00000554074 AATFQ9NY61 560 aaKnown RBP eCLIP8.08□□□□□ -1.12
SLIRP-203ENST00000554074 PNMA3Q9UL41 463 aa8.08□□□□□ -1.12
SLIRP-203ENST00000554074 FLT1P17948 1338 aa8.07□□□□□ -1.12
SLIRP-203ENST00000554074 MYPNQ86TC9 1320 aa8.07□□□□□ -1.12
SLIRP-203ENST00000554074 TRIM75PA6NK02 468 aa8.07□□□□□ -1.12
SLIRP-203ENST00000554074 FAM196BA6NMK8 535 aa8.07□□□□□ -1.12
SLIRP-203ENST00000554074 USP17L5A8MUK1 530 aa8.07□□□□□ -1.12
SLIRP-203ENST00000554074 FMNL1O95466 1100 aaPredicted RBP8.07□□□□□ -1.12
SLIRP-203ENST00000554074 ASNSP08243 561 aa8.07□□□□□ -1.12
SLIRP-203ENST00000554074 SLURP2P0DP57 97 aa8.07□□□□□ -1.12
SLIRP-203ENST00000554074 CAPN2P17655 700 aa8.07□□□□□ -1.12
SLIRP-203ENST00000554074 EN2P19622 333 aaPredicted RBP8.07□□□□□ -1.12
SLIRP-203ENST00000554074 GRK4P32298 578 aa8.07□□□□□ -1.12
SLIRP-203ENST00000554074 PABPC4Q13310 644 aaKnown RBP eCLIP8.07□□□□□ -1.12
SLIRP-203ENST00000554074 FAM110CQ1W6H9 321 aa8.07□□□□□ -1.12
SLIRP-203ENST00000554074 ADGRA1Q86SQ6 560 aa8.07□□□□□ -1.12
SLIRP-203ENST00000554074 RPAP2Q8IXW5 612 aaPredicted RBP8.07□□□□□ -1.12
SLIRP-203ENST00000554074 RAET1EQ8TD07 263 aa8.07□□□□□ -1.12
SLIRP-203ENST00000554074 GCC1Q96CN9 775 aa8.07□□□□□ -1.12
SLIRP-203ENST00000554074 WDR18Q9BV38 432 aa8.07□□□□□ -1.12
SLIRP-203ENST00000554074 CHMP4BQ9H444 224 aaKnown RBP8.07□□□□□ -1.12
SLIRP-203ENST00000554074 AS3MTQ9HBK9 375 aa8.07□□□□□ -1.12
SLIRP-203ENST00000554074 PIH1D3Q9NQM4 214 aaKnown RBP8.07□□□□□ -1.12
SLIRP-203ENST00000554074 TLR7Q9NYK1 1049 aaKnown RBP8.07□□□□□ -1.12
SLIRP-203ENST00000554074 DDX19BQ9UMR2 479 aa8.07□□□□□ -1.12
SLIRP-203ENST00000554074 HMMRO75330 724 aa8.06□□□□□ -1.12
SLIRP-203ENST00000554074 GCLCP48506 637 aaPredicted RBP8.06□□□□□ -1.12
SLIRP-203ENST00000554074 MAP3K12Q12852 859 aa8.06□□□□□ -1.12
SLIRP-203ENST00000554074 SPP2Q13103 211 aa8.06□□□□□ -1.12
SLIRP-203ENST00000554074 IRF5Q13568 498 aa8.06□□□□□ -1.12
SLIRP-203ENST00000554074 RRP1BQ14684 758 aaKnown RBP8.06□□□□□ -1.12
SLIRP-203ENST00000554074 TTF1Q15361 905 aaPredicted RBP8.06□□□□□ -1.12
SLIRP-203ENST00000554074 SLC4A8Q2Y0W8 1093 aa8.06□□□□□ -1.12
SLIRP-203ENST00000554074 SLAIN1Q8ND83 568 aa8.06□□□□□ -1.12
SLIRP-203ENST00000554074 NKX2-3Q8TAU0 364 aa8.06□□□□□ -1.12
SLIRP-203ENST00000554074 PANK1Q8TE04 598 aa8.06□□□□□ -1.12
SLIRP-203ENST00000554074 PXYLP1Q8TE99 480 aa8.06□□□□□ -1.12
SLIRP-203ENST00000554074 SMCR8Q8TEV9 937 aaPredicted RBP8.06□□□□□ -1.12
SLIRP-203ENST00000554074 SH3TC2Q8TF17 1288 aa8.06□□□□□ -1.12
SLIRP-203ENST00000554074 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.06□□□□□ -1.12
SLIRP-203ENST00000554074 TGFBRAP1Q8WUH2 860 aa8.06□□□□□ -1.12
SLIRP-203ENST00000554074 CCDC8Q9H0W5 538 aaPredicted RBP8.06□□□□□ -1.12
SLIRP-203ENST00000554074 EXOC6BQ9Y2D4 811 aa8.06□□□□□ -1.12
SLIRP-203ENST00000554074 PARP14Q460N5 1801 aa8.06□□□□□ -1.12
SLIRP-203ENST00000554074 C19orf81C9J6K1 198 aa8.05□□□□□ -1.12
SLIRP-203ENST00000554074 IDH1O75874 414 aaKnown RBP8.05□□□□□ -1.12
SLIRP-203ENST00000554074 HLA-DOAP06340 250 aa8.05□□□□□ -1.12
SLIRP-203ENST00000554074 GJB1P08034 283 aa8.05□□□□□ -1.12
SLIRP-203ENST00000554074 CYP7A1P22680 504 aa8.05□□□□□ -1.12
SLIRP-203ENST00000554074 HOXA7P31268 230 aaPredicted RBP8.05□□□□□ -1.12
SLIRP-203ENST00000554074 HMGCS2P54868 508 aa8.05□□□□□ -1.12
SLIRP-203ENST00000554074 UBXN2AP68543 259 aa8.05□□□□□ -1.12
SLIRP-203ENST00000554074 PRKCZQ05513 592 aa8.05□□□□□ -1.12
SLIRP-203ENST00000554074 TREML2Q5T2D2 321 aa8.05□□□□□ -1.12
SLIRP-203ENST00000554074 CCDC84Q86UT8 332 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms