RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 NAA15Q9BXJ9 866 aaKnown RBP12.92□□□□□ -0.34
NRDE2-202ENST00000553409 RNF216Q9NWF9 866 aaPredicted RBP12.92□□□□□ -0.34
NRDE2-202ENST00000553409 HOOK1Q9UJC3 728 aaKnown RBP12.92□□□□□ -0.34
NRDE2-202ENST00000553409 CASP14P31944 242 aa12.91□□□□□ -0.34
NRDE2-202ENST00000553409 PIP4K2BP78356 416 aa12.91□□□□□ -0.34
NRDE2-202ENST00000553409 ZNF790Q6PG37 636 aa12.91□□□□□ -0.34
NRDE2-202ENST00000553409 RIN2Q8WYP3 895 aaPredicted RBP12.91□□□□□ -0.34
NRDE2-202ENST00000553409 NCAPGQ9BPX3 1015 aa12.91□□□□□ -0.34
NRDE2-202ENST00000553409 DACH1Q9UI36 760 aa12.91□□□□□ -0.34
NRDE2-202ENST00000553409 MFAP3LO75121 409 aa12.91□□□□□ -0.34
NRDE2-202ENST00000553409 METAP2P50579 478 aaKnown RBP eCLIP12.91□□□□□ -0.34
NRDE2-202ENST00000553409 WHAMMP3Q1A5X7 153 aa12.91□□□□□ -0.34
NRDE2-202ENST00000553409 DNAJC21Q5F1R6 531 aaKnown RBP12.91□□□□□ -0.34
NRDE2-202ENST00000553409 EFCAB13Q8IY85 973 aa12.91□□□□□ -0.34
NRDE2-202ENST00000553409 AFAP1L1Q8TED9 768 aa12.91□□□□□ -0.34
NRDE2-202ENST00000553409 ACBD3Q9H3P7 528 aa12.91□□□□□ -0.34
NRDE2-202ENST00000553409 DEF6Q9H4E7 631 aa12.91□□□□□ -0.34
NRDE2-202ENST00000553409 PRPF6O94906 941 aaKnown RBP12.91□□□□□ -0.34
NRDE2-202ENST00000553409 STX17P56962 302 aa12.91□□□□□ -0.34
NRDE2-202ENST00000553409 TADA2BQ86TJ2 420 aa12.91□□□□□ -0.34
NRDE2-202ENST00000553409 LMO7Q8WWI1 1683 aa12.9□□□□□ -0.34
NRDE2-202ENST00000553409 ZMYM6O95789 1325 aa12.9□□□□□ -0.34
NRDE2-202ENST00000553409 FXR1P51114 621 aaKnown RBP eCLIP12.9□□□□□ -0.34
NRDE2-202ENST00000553409 CASP7P55210 303 aa12.9□□□□□ -0.34
NRDE2-202ENST00000553409 LRRC24Q50LG9 513 aa12.9□□□□□ -0.34
NRDE2-202ENST00000553409 KLHL10Q6JEL2 608 aa12.9□□□□□ -0.34
NRDE2-202ENST00000553409 ELOA2Q8IYF1 753 aaPredicted RBP12.9□□□□□ -0.34
NRDE2-202ENST00000553409 SENP2Q9HC62 589 aa12.9□□□□□ -0.34
NRDE2-202ENST00000553409 PBX1P40424 430 aa12.9□□□□□ -0.34
NRDE2-202ENST00000553409 PLCD1P51178 756 aa12.9□□□□□ -0.34
NRDE2-202ENST00000553409 AKAP17AQ02040 695 aaKnown RBP12.9□□□□□ -0.34
NRDE2-202ENST00000553409 WDR93Q6P2C0 686 aa12.9□□□□□ -0.34
NRDE2-202ENST00000553409 LRP10Q7Z4F1 713 aa12.9□□□□□ -0.34
NRDE2-202ENST00000553409 MICALL1Q8N3F8 863 aa12.9□□□□□ -0.34
NRDE2-202ENST00000553409 TTF2Q9UNY4 1162 aaKnown RBP12.9□□□□□ -0.34
NRDE2-202ENST00000553409 ZNF213O14771 459 aa12.9□□□□□ -0.35
NRDE2-202ENST00000553409 CPP00450 1065 aa12.9□□□□□ -0.35
NRDE2-202ENST00000553409 TRDNQ13061 729 aa12.9□□□□□ -0.35
NRDE2-202ENST00000553409 MICU3Q86XE3 530 aa12.9□□□□□ -0.35
NRDE2-202ENST00000553409 GDAP1L1Q96MZ0 367 aa12.9□□□□□ -0.35
NRDE2-202ENST00000553409 MYCBPQ99417 103 aaPredicted RBP12.9□□□□□ -0.35
NRDE2-202ENST00000553409 PUS7LQ9H0K6 701 aaKnown RBP12.9□□□□□ -0.35
NRDE2-202ENST00000553409 ADD3Q9UEY8 706 aaKnown RBP12.9□□□□□ -0.35
NRDE2-202ENST00000553409 GYPCP04921 128 aa12.89□□□□□ -0.35
NRDE2-202ENST00000553409 TUBBP07437 444 aa12.89□□□□□ -0.35
NRDE2-202ENST00000553409 ARHGAP25P42331 645 aa12.89□□□□□ -0.35
NRDE2-202ENST00000553409 AMPD2Q01433 879 aa12.89□□□□□ -0.35
NRDE2-202ENST00000553409 ZNF594Q96JF6 807 aaPredicted RBP12.89□□□□□ -0.35
NRDE2-202ENST00000553409 MYO6Q9UM54 1294 aa12.89□□□□□ -0.35
NRDE2-202ENST00000553409 ANGEL1Q9UNK9 670 aaKnown RBP12.89□□□□□ -0.35
NRDE2-202ENST00000553409 A0A087WUV0 522 aaPredicted RBP12.89□□□□□ -0.35
NRDE2-202ENST00000553409 AARSP49588 968 aaKnown RBP eCLIP12.89□□□□□ -0.35
NRDE2-202ENST00000553409 TOB1P50616 345 aaPredicted RBP12.89□□□□□ -0.35
NRDE2-202ENST00000553409 ERVK-24P63145 666 aa12.89□□□□□ -0.35
NRDE2-202ENST00000553409 FOXO4P98177 505 aa12.89□□□□□ -0.35
NRDE2-202ENST00000553409 USP49Q70CQ1 688 aa12.89□□□□□ -0.35
NRDE2-202ENST00000553409 CPDO75976 1380 aa12.89□□□□□ -0.35
NRDE2-202ENST00000553409 RANBP6O60518 1105 aaKnown RBP12.88□□□□□ -0.35
NRDE2-202ENST00000553409 MMS22LQ6ZRQ5 1243 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 TICAM2Q86XR7 235 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 GPATCH11Q8N954 259 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 FBXO2Q9UK22 296 aaPredicted RBP12.88□□□□□ -0.35
NRDE2-202ENST00000553409 BTBD18B2RXH4 712 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 CDKL5O76039 1030 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 CD44P16070 742 aaKnown RBP12.88□□□□□ -0.35
NRDE2-202ENST00000553409 PTPREP23469 700 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 ERCC5P28715 1186 aaPredicted RBP12.88□□□□□ -0.35
NRDE2-202ENST00000553409 TRIM29Q14134 588 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 APOA5Q6Q788 366 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 CYB5R4Q7L1T6 521 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 SUGP1Q8IWZ8 645 aaKnown RBP12.88□□□□□ -0.35
NRDE2-202ENST00000553409 TRIML1Q8N9V2 468 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 ZNF496Q96IT1 587 aaPredicted RBP12.88□□□□□ -0.35
NRDE2-202ENST00000553409 MYL10Q9BUA6 226 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 VIPAS39Q9H9C1 493 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 GPR108Q9NPR9 543 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 HPCAL4Q9UM19 191 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 ZC3H4Q9UPT8 1303 aaKnown RBP12.88□□□□□ -0.35
NRDE2-202ENST00000553409 EXOC5O00471 708 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 CDC25AP30304 524 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 IL15P40933 162 aaPredicted RBP12.88□□□□□ -0.35
NRDE2-202ENST00000553409 IARSP41252 1262 aaKnown RBP12.88□□□□□ -0.35
NRDE2-202ENST00000553409 NTRK3Q16288 839 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.88□□□□□ -0.35
NRDE2-202ENST00000553409 CCDC148Q8NFR7 591 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 NBPF3Q9H094 633 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 WWC3Q9ULE0 1092 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 RGPD2P0DJD1 1756 aa12.88□□□□□ -0.35
NRDE2-202ENST00000553409 UBN2Q6ZU65 1347 aa12.87□□□□□ -0.35
NRDE2-202ENST00000553409 RNF225M0QZC1 329 aaPredicted RBP12.87□□□□□ -0.35
NRDE2-202ENST00000553409 ACTN4O43707 911 aaKnown RBP12.87□□□□□ -0.35
NRDE2-202ENST00000553409 SPATA1Q5VX52 437 aa12.87□□□□□ -0.35
NRDE2-202ENST00000553409 CPLX2Q6PUV4 134 aaKnown RBP12.87□□□□□ -0.35
NRDE2-202ENST00000553409 CNGA4Q8IV77 575 aa12.87□□□□□ -0.35
NRDE2-202ENST00000553409 KAT2BQ92831 832 aa12.87□□□□□ -0.35
NRDE2-202ENST00000553409 SMARCC1Q92922 1105 aaPredicted RBP12.87□□□□□ -0.35
NRDE2-202ENST00000553409 LTN1O94822 1766 aa12.87□□□□□ -0.35
NRDE2-202ENST00000553409 CASP1P29466 404 aa12.87□□□□□ -0.35
NRDE2-202ENST00000553409 NOSTRINQ8IVI9 506 aa12.87□□□□□ -0.35
NRDE2-202ENST00000553409 CTCFLQ8NI51 663 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms