RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 PDE3AQ14432 1141 aa21.84■■□□□ 1.09
PNN-202ENST00000553331 KIF22Q14807 665 aa21.84■■□□□ 1.09
PNN-202ENST00000553331 SLC4A8Q2Y0W8 1093 aa21.84■■□□□ 1.09
PNN-202ENST00000553331 SAP30BPQ9UHR5 308 aaKnown RBP21.84■■□□□ 1.09
PNN-202ENST00000553331 AFG3L2Q9Y4W6 797 aa21.84■■□□□ 1.09
PNN-202ENST00000553331 ZSWIM8A7E2V4 1837 aa21.84■■□□□ 1.09
PNN-202ENST00000553331 ATAD5Q96QE3 1844 aa21.83■■□□□ 1.09
PNN-202ENST00000553331 ARHGEF6Q15052 776 aa21.83■■□□□ 1.09
PNN-202ENST00000553331 TRIM34Q9BYJ4 488 aa21.83■■□□□ 1.09
PNN-202ENST00000553331 ARHGAP39Q9C0H5 1083 aa21.83■■□□□ 1.09
PNN-202ENST00000553331 COL2A1P02458 1487 aaPredicted RBP21.83■■□□□ 1.08
PNN-202ENST00000553331 FOCADQ5VW36 1801 aa21.83■■□□□ 1.08
PNN-202ENST00000553331 PHIPQ8WWQ0 1821 aa21.83■■□□□ 1.08
PNN-202ENST00000553331 FLT1P17948 1338 aa21.82■■□□□ 1.08
PNN-202ENST00000553331 RAB11FIP3O75154 756 aa21.82■■□□□ 1.08
PNN-202ENST00000553331 MAP3K12Q12852 859 aa21.82■■□□□ 1.08
PNN-202ENST00000553331 DNAJC2Q99543 621 aaKnown RBP21.82■■□□□ 1.08
PNN-202ENST00000553331 PI4KBQ9UBF8 816 aa21.82■■□□□ 1.08
PNN-202ENST00000553331 PALD1Q9ULE6 856 aa21.82■■□□□ 1.08
PNN-202ENST00000553331 A0A0G2JLL6 359 aaPredicted RBP21.81■■□□□ 1.08
PNN-202ENST00000553331 CYP2C8P10632 490 aa21.81■■□□□ 1.08
PNN-202ENST00000553331 GPAT2Q6NUI2 795 aa21.81■■□□□ 1.08
PNN-202ENST00000553331 FASTKD5Q7L8L6 764 aaKnown RBP21.81■■□□□ 1.08
PNN-202ENST00000553331 PRRT2Q7Z6L0 340 aaPredicted RBP21.81■■□□□ 1.08
PNN-202ENST00000553331 CRACR2BQ8N4Y2 399 aaPredicted RBP21.81■■□□□ 1.08
PNN-202ENST00000553331 DHX36Q9H2U1 1008 aaKnown RBP21.81■■□□□ 1.08
PNN-202ENST00000553331 PTPRFP10586 1907 aa21.8■■□□□ 1.08
PNN-202ENST00000553331 USP5P45974 858 aa21.8■■□□□ 1.08
PNN-202ENST00000553331 LACTBP83111 547 aaPredicted RBP21.8■■□□□ 1.08
PNN-202ENST00000553331 RRP1BQ14684 758 aaKnown RBP21.8■■□□□ 1.08
PNN-202ENST00000553331 C17orf99Q6UX52 265 aa21.8■■□□□ 1.08
PNN-202ENST00000553331 PARK7Q99497 189 aaKnown RBP21.8■■□□□ 1.08
PNN-202ENST00000553331 HERC5Q9UII4 1024 aaKnown RBP21.8■■□□□ 1.08
PNN-202ENST00000553331 MYH1P12882 1939 aa21.8■■□□□ 1.08
PNN-202ENST00000553331 SIPA1L1O43166 1804 aa21.8■■□□□ 1.08
PNN-202ENST00000553331 GOLIM4O00461 696 aa21.79■■□□□ 1.08
PNN-202ENST00000553331 IGSF3O75054 1194 aa21.79■■□□□ 1.08
PNN-202ENST00000553331 CAP2P40123 477 aa21.79■■□□□ 1.08
PNN-202ENST00000553331 TTF1Q15361 905 aaPredicted RBP21.79■■□□□ 1.08
PNN-202ENST00000553331 PTCH2Q9Y6C5 1203 aa21.79■■□□□ 1.08
PNN-202ENST00000553331 HLA-DOAP06340 250 aa21.78■■□□□ 1.08
PNN-202ENST00000553331 SPP2Q13103 211 aa21.78■■□□□ 1.08
PNN-202ENST00000553331 SMARCA5O60264 1052 aaPredicted RBP21.77■■□□□ 1.08
PNN-202ENST00000553331 SLC9C2Q5TAH2 1124 aa21.77■■□□□ 1.08
PNN-202ENST00000553331 EDC3Q96F86 508 aaKnown RBP21.77■■□□□ 1.08
PNN-202ENST00000553331 BOLA2Q9H3K6 86 aa21.77■■□□□ 1.08
PNN-202ENST00000553331 MAGEB6P1A0A0J9YX57 407 aa21.76■■□□□ 1.07
PNN-202ENST00000553331 USP17L5A8MUK1 530 aa21.76■■□□□ 1.07
PNN-202ENST00000553331 GDF11O95390 407 aa21.76■■□□□ 1.07
PNN-202ENST00000553331 FMNL1O95466 1100 aaPredicted RBP21.76■■□□□ 1.07
PNN-202ENST00000553331 PSMC4P43686 418 aa21.76■■□□□ 1.07
PNN-202ENST00000553331 SLC9C1Q4G0N8 1177 aa21.76■■□□□ 1.07
PNN-202ENST00000553331 FOXP4Q8IVH2 680 aaPredicted RBP21.76■■□□□ 1.07
PNN-202ENST00000553331 ZNF280CQ8ND82 737 aa21.76■■□□□ 1.07
PNN-202ENST00000553331 ADGRA2Q96PE1 1338 aa21.76■■□□□ 1.07
PNN-202ENST00000553331 MYCP01106 439 aaPredicted RBP21.75■■□□□ 1.07
PNN-202ENST00000553331 PDE6AP16499 860 aa21.75■■□□□ 1.07
PNN-202ENST00000553331 TREML2Q5T2D2 321 aa21.75■■□□□ 1.07
PNN-202ENST00000553331 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.75■■□□□ 1.07
PNN-202ENST00000553331 LRRCC1Q9C099 1032 aa21.75■■□□□ 1.07
PNN-202ENST00000553331 DNAJC18Q9H819 358 aa21.75■■□□□ 1.07
PNN-202ENST00000553331 AS3MTQ9HBK9 375 aa21.75■■□□□ 1.07
PNN-202ENST00000553331 CTGFP29279 349 aa21.74■■□□□ 1.07
PNN-202ENST00000553331 HMGCS2P54868 508 aa21.74■■□□□ 1.07
PNN-202ENST00000553331 SHROOM1Q2M3G4 852 aaPredicted RBP21.74■■□□□ 1.07
PNN-202ENST00000553331 CERS3Q8IU89 383 aa21.74■■□□□ 1.07
PNN-202ENST00000553331 SMCR8Q8TEV9 937 aaPredicted RBP21.74■■□□□ 1.07
PNN-202ENST00000553331 TRIM47Q96LD4 638 aa21.74■■□□□ 1.07
PNN-202ENST00000553331 AGTPBP1Q9UPW5 1226 aa21.74■■□□□ 1.07
PNN-202ENST00000553331 ZNF532Q9HCE3 1301 aa21.74■■□□□ 1.07
PNN-202ENST00000553331 JAG1P78504 1218 aa21.73■■□□□ 1.07
PNN-202ENST00000553331 NBPF11Q86T75 865 aa21.73■■□□□ 1.07
PNN-202ENST00000553331 ARMC5Q96C12 935 aa21.73■■□□□ 1.07
PNN-202ENST00000553331 PAG1Q9NWQ8 432 aa21.73■■□□□ 1.07
PNN-202ENST00000553331 SLC45A1Q9Y2W3 748 aa21.73■■□□□ 1.07
PNN-202ENST00000553331 POTEFA5A3E0 1075 aa21.72■■□□□ 1.07
PNN-202ENST00000553331 GNRH1P01148 92 aa21.72■■□□□ 1.07
PNN-202ENST00000553331 ASNSP08243 561 aa21.72■■□□□ 1.07
PNN-202ENST00000553331 BCRP11274 1271 aa21.72■■□□□ 1.07
PNN-202ENST00000553331 SH3TC2Q8TF17 1288 aa21.72■■□□□ 1.07
PNN-202ENST00000553331 RIOK1Q9BRS2 568 aaKnown RBP21.72■■□□□ 1.07
PNN-202ENST00000553331 TBC1D2Q9BYX2 928 aa21.72■■□□□ 1.07
PNN-202ENST00000553331 MGAMO43451 1857 aa21.72■■□□□ 1.07
PNN-202ENST00000553331 ATP5JP18859 108 aa21.71■■□□□ 1.07
PNN-202ENST00000553331 OSBPP22059 807 aa21.71■■□□□ 1.07
PNN-202ENST00000553331 HOXD10P28358 340 aa21.71■■□□□ 1.07
PNN-202ENST00000553331 MTMR2Q13614 643 aa21.71■■□□□ 1.07
PNN-202ENST00000553331 SLFNL1Q499Z3 407 aa21.71■■□□□ 1.07
PNN-202ENST00000553331 TMED8Q6PL24 325 aaPredicted RBP21.71■■□□□ 1.07
PNN-202ENST00000553331 METTL16Q86W50 562 aaKnown RBP21.71■■□□□ 1.07
PNN-202ENST00000553331 PROCA1Q8NCQ7 364 aaPredicted RBP21.71■■□□□ 1.07
PNN-202ENST00000553331 NAV1Q8NEY1 1877 aa21.71■■□□□ 1.07
PNN-202ENST00000553331 LOC285556D6RIA3 1793 aa21.7■■□□□ 1.06
PNN-202ENST00000553331 POLR3DP05423 398 aaPredicted RBP21.7■■□□□ 1.06
PNN-202ENST00000553331 FCGRTP55899 365 aa21.7■■□□□ 1.06
PNN-202ENST00000553331 TTC6Q86TZ1 520 aa21.7■■□□□ 1.06
PNN-202ENST00000553331 ANKRD13CQ8N6S4 541 aa21.7■■□□□ 1.06
PNN-202ENST00000553331 RAET1EQ8TD07 263 aa21.7■■□□□ 1.06
PNN-202ENST00000553331 TMEM106CQ9BVX2 250 aa21.7■■□□□ 1.06
PNN-202ENST00000553331 CRNKL1Q9BZJ0 848 aaKnown RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms