RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 APOBEC3HQ6NTF7 200 aaKnown RBP22.93■■□□□ 1.26
RBFOX1-215ENST00000553186 NFXL1Q6ZNB6 911 aa22.93■■□□□ 1.26
RBFOX1-215ENST00000553186 MCTP1Q6DN14 999 aa22.92■■□□□ 1.26
RBFOX1-215ENST00000553186 KIAA0825Q8IV33 1275 aa22.92■■□□□ 1.26
RBFOX1-215ENST00000553186 TMTC2Q8N394 836 aa22.92■■□□□ 1.26
RBFOX1-215ENST00000553186 ZNF277Q9NRM2 450 aaPredicted RBP22.92■■□□□ 1.26
RBFOX1-215ENST00000553186 SAP30BPQ9UHR5 308 aaKnown RBP22.92■■□□□ 1.26
RBFOX1-215ENST00000553186 TNKSO95271 1327 aa22.92■■□□□ 1.26
RBFOX1-215ENST00000553186 ERICH2A1L162 156 aa22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 ZBTB43O43298 467 aa22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 METAP2P50579 478 aaKnown RBP eCLIP22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 DALRD3Q5D0E6 543 aaKnown RBP22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 DYNLL2Q96FJ2 89 aa22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 ZSCAN10Q96SZ4 725 aaPredicted RBP22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 CD2APQ9Y5K6 639 aa22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 SLC12A7Q9Y666 1083 aa22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 VPS37CA5D8V6 355 aaPredicted RBP22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 CCDC69A6NI79 296 aa22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 FDPSP14324 419 aaKnown RBP22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 RXRAP19793 462 aa22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 CRKP46108 304 aa22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 HDLBPQ00341 1268 aaKnown RBP22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 CDC37L1Q7L3B6 337 aa22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 MICU3Q86XE3 530 aa22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 AMOTL1Q8IY63 956 aa22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 ENAHQ8N8S7 591 aaPredicted RBP22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 ZDHHC15Q96MV8 337 aa22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 VPS33BQ9H267 617 aa22.91■■□□□ 1.26
RBFOX1-215ENST00000553186 CDK5RAP2Q96SN8 1893 aa22.9■■□□□ 1.26
RBFOX1-215ENST00000553186 DDX60LQ5H9U9 1706 aaKnown RBP22.9■■□□□ 1.26
RBFOX1-215ENST00000553186 GOLGA6L22H0YM25 854 aa22.9■■□□□ 1.26
RBFOX1-215ENST00000553186 PPFIA3O75145 1194 aa22.9■■□□□ 1.26
RBFOX1-215ENST00000553186 WDHD1O75717 1129 aaPredicted RBP22.9■■□□□ 1.26
RBFOX1-215ENST00000553186 POLR3DP05423 398 aaPredicted RBP22.9■■□□□ 1.26
RBFOX1-215ENST00000553186 MYL10Q9BUA6 226 aa22.9■■□□□ 1.26
RBFOX1-215ENST00000553186 FAM217BQ9NTX9 383 aaPredicted RBP22.9■■□□□ 1.26
RBFOX1-215ENST00000553186 PPP1R1BQ9UD71 204 aaPredicted RBP22.9■■□□□ 1.26
RBFOX1-215ENST00000553186 NID2Q14112 1375 aa22.9■■□□□ 1.26
RBFOX1-215ENST00000553186 NAV1Q8NEY1 1877 aa22.9■■□□□ 1.26
RBFOX1-215ENST00000553186 COL4A5P29400 1685 aa22.9■■□□□ 1.26
RBFOX1-215ENST00000553186 CDC27P30260 824 aa22.9■■□□□ 1.26
RBFOX1-215ENST00000553186 ADD1P35611 737 aaKnown RBP22.9■■□□□ 1.26
RBFOX1-215ENST00000553186 CDC42EP5Q6NZY7 148 aa22.9■■□□□ 1.26
RBFOX1-215ENST00000553186 IQCA1Q86XH1 822 aa22.9■■□□□ 1.26
RBFOX1-215ENST00000553186 FAM184AQ8NB25 1140 aa22.9■■□□□ 1.26
RBFOX1-215ENST00000553186 LARGE2Q8N3Y3 721 aa22.89■■□□□ 1.26
RBFOX1-215ENST00000553186 USP40Q9NVE5 1235 aa22.89■■□□□ 1.26
RBFOX1-215ENST00000553186 NT5C2P49902 561 aa22.89■■□□□ 1.25
RBFOX1-215ENST00000553186 FAM47AQ5JRC9 791 aa22.89■■□□□ 1.25
RBFOX1-215ENST00000553186 DDX4Q9NQI0 724 aaKnown RBP22.89■■□□□ 1.25
RBFOX1-215ENST00000553186 CPLX1O14810 134 aa22.88■■□□□ 1.25
RBFOX1-215ENST00000553186 TRAK2O60296 914 aa22.88■■□□□ 1.25
RBFOX1-215ENST00000553186 GOLGA8AA7E2F4 631 aa22.87■■□□□ 1.25
RBFOX1-215ENST00000553186 PTMSP20962 102 aa22.87■■□□□ 1.25
RBFOX1-215ENST00000553186 RCAN1P53805 252 aa22.87■■□□□ 1.25
RBFOX1-215ENST00000553186 NTRK3Q16288 839 aa22.87■■□□□ 1.25
RBFOX1-215ENST00000553186 FOXD4L6Q3SYB3 417 aaPredicted RBP22.87■■□□□ 1.25
RBFOX1-215ENST00000553186 FOXD4L3Q6VB84 417 aaPredicted RBP22.87■■□□□ 1.25
RBFOX1-215ENST00000553186 LMBRD1Q9NUN5 540 aa22.87■■□□□ 1.25
RBFOX1-215ENST00000553186 SERPINA10Q9UK55 444 aa22.87■■□□□ 1.25
RBFOX1-215ENST00000553186 KIF3AQ9Y496 699 aa22.87■■□□□ 1.25
RBFOX1-215ENST00000553186 PCDHAC2Q9Y5I4 1007 aa22.87■■□□□ 1.25
RBFOX1-215ENST00000553186 ADAMTSL1Q8N6G6 1762 aa22.87■■□□□ 1.25
RBFOX1-215ENST00000553186 SYNE3Q6ZMZ3 975 aa22.87■■□□□ 1.25
RBFOX1-215ENST00000553186 CCDC144CPQ8IYA2 1237 aa22.87■■□□□ 1.25
RBFOX1-215ENST00000553186 ZNF654Q8IZM8 581 aa22.87■■□□□ 1.25
RBFOX1-215ENST00000553186 SLC44A5Q8NCS7 719 aa22.87■■□□□ 1.25
RBFOX1-215ENST00000553186 BRCA1P38398 1863 aaKnown RBP22.86■■□□□ 1.25
RBFOX1-215ENST00000553186 NMT2O60551 498 aa22.86■■□□□ 1.25
RBFOX1-215ENST00000553186 C16orf86Q6ZW13 317 aa22.86■■□□□ 1.25
RBFOX1-215ENST00000553186 ATP6V1DQ9Y5K8 247 aa22.86■■□□□ 1.25
RBFOX1-215ENST00000553186 TSPY2A6NKD2 308 aa22.86■■□□□ 1.25
RBFOX1-215ENST00000553186 PICALMQ13492 652 aa22.86■■□□□ 1.25
RBFOX1-215ENST00000553186 FOCADQ5VW36 1801 aa22.85■■□□□ 1.25
RBFOX1-215ENST00000553186 IFIT1BQ5T764 474 aaKnown RBP22.85■■□□□ 1.25
RBFOX1-215ENST00000553186 MKNK2Q9HBH9 465 aa22.85■■□□□ 1.25
RBFOX1-215ENST00000553186 ORC3Q9UBD5 711 aaPredicted RBP22.85■■□□□ 1.25
RBFOX1-215ENST00000553186 VIL1P09327 827 aaKnown RBP22.84■■□□□ 1.25
RBFOX1-215ENST00000553186 IARSP41252 1262 aaKnown RBP22.84■■□□□ 1.25
RBFOX1-215ENST00000553186 TFAP4Q01664 338 aa22.84■■□□□ 1.25
RBFOX1-215ENST00000553186 FERMT3Q86UX7 667 aa22.84■■□□□ 1.25
RBFOX1-215ENST00000553186 KLHL34Q8N239 644 aa22.84■■□□□ 1.25
RBFOX1-215ENST00000553186 RAD17O75943 681 aa22.84■■□□□ 1.25
RBFOX1-215ENST00000553186 RASA1P20936 1047 aa22.84■■□□□ 1.25
RBFOX1-215ENST00000553186 CDK8P49336 464 aa22.84■■□□□ 1.25
RBFOX1-215ENST00000553186 RSBN1LQ6PCB5 846 aaPredicted RBP22.84■■□□□ 1.25
RBFOX1-215ENST00000553186 IL17RBQ9NRM6 502 aa22.84■■□□□ 1.25
RBFOX1-215ENST00000553186 H3BQV1 296 aa22.83■■□□□ 1.25
RBFOX1-215ENST00000553186 PSMD14O00487 310 aa22.83■■□□□ 1.25
RBFOX1-215ENST00000553186 PRPF40AO75400 957 aaKnown RBP22.83■■□□□ 1.25
RBFOX1-215ENST00000553186 CDKL5O76039 1030 aa22.83■■□□□ 1.25
RBFOX1-215ENST00000553186 NFIAQ12857 509 aa22.83■■□□□ 1.25
RBFOX1-215ENST00000553186 IFFO2Q5TF58 517 aa22.83■■□□□ 1.25
RBFOX1-215ENST00000553186 RCSD1Q6JBY9 416 aa22.83■■□□□ 1.25
RBFOX1-215ENST00000553186 FANCBQ8NB91 859 aa22.83■■□□□ 1.25
RBFOX1-215ENST00000553186 GMLQ99445 158 aa22.83■■□□□ 1.25
RBFOX1-215ENST00000553186 TAOK3Q9H2K8 898 aa22.83■■□□□ 1.25
RBFOX1-215ENST00000553186 ZNF287Q9HBT7 754 aa22.83■■□□□ 1.25
RBFOX1-215ENST00000553186 ZNRF3Q9ULT6 936 aa22.83■■□□□ 1.25
RBFOX1-215ENST00000553186 MYO3BQ8WXR4 1341 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms