RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 PPP2R3AQ06190 1150 aa14.17□□□□□ -0.14
HDAC7-230ENST00000552960 METTL24Q5JXM2 366 aa14.17□□□□□ -0.14
HDAC7-230ENST00000552960 BRAPQ7Z569 592 aa14.17□□□□□ -0.14
HDAC7-230ENST00000552960 VPS37DQ86XT2 251 aa14.17□□□□□ -0.14
HDAC7-230ENST00000552960 BAG1Q99933 345 aaPredicted RBP14.17□□□□□ -0.14
HDAC7-230ENST00000552960 MYL10Q9BUA6 226 aa14.17□□□□□ -0.14
HDAC7-230ENST00000552960 LZTFL1Q9NQ48 299 aa14.17□□□□□ -0.14
HDAC7-230ENST00000552960 CNNM1Q9NRU3 951 aa14.17□□□□□ -0.14
HDAC7-230ENST00000552960 RIPOR2Q9Y4F9 1068 aa14.17□□□□□ -0.14
HDAC7-230ENST00000552960 SPATA31A6Q5VVP1 1343 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 PHLPP2Q6ZVD8 1323 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 COL4A1P02462 1669 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 EFCAB8A8MWE9 144 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 LMAN1P49257 510 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 MCM6Q14566 821 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 TTC39AQ5SRH9 613 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 NFXL1Q6ZNB6 911 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 CREBRFQ8IUR6 639 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 BPIFA3Q9BQP9 254 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 AGXT2Q9BYV1 514 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 ARFGAP3Q9NP61 516 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 PCDHA5Q9Y5H7 936 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 NEDD4P46934 1319 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 ZNF213O14771 459 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 TRDNQ13061 729 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 LONRF3Q496Y0 759 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 TOGARAM2Q6ZUX3 1019 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 IPO4Q8TEX9 1081 aaKnown RBP14.16□□□□□ -0.14
HDAC7-230ENST00000552960 CHMP4CQ96CF2 233 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 PLA2G12BQ9BX93 195 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 HSD3B7Q9H2F3 369 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 KCND1Q9NSA2 647 aa14.16□□□□□ -0.14
HDAC7-230ENST00000552960 PUF60Q9UHX1 559 aaKnown RBP14.16□□□□□ -0.14
HDAC7-230ENST00000552960 VWA3AA6NCI4 1184 aa14.15□□□□□ -0.14
HDAC7-230ENST00000552960 ZRANB2O95218 330 aaKnown RBP eCLIP14.15□□□□□ -0.141e-6■■■■■ 26.9
HDAC7-230ENST00000552960 GPS2Q13227 327 aa14.15□□□□□ -0.14
HDAC7-230ENST00000552960 UBE2Q2LH0YL09 131 aa14.15□□□□□ -0.14
HDAC7-230ENST00000552960 GNPATO15228 680 aa14.15□□□□□ -0.14
HDAC7-230ENST00000552960 PDE8AO60658 829 aa14.15□□□□□ -0.14
HDAC7-230ENST00000552960 SLC39A14Q15043 492 aa14.15□□□□□ -0.14
HDAC7-230ENST00000552960 SHC4Q6S5L8 630 aa14.15□□□□□ -0.14
HDAC7-230ENST00000552960 VSTM4Q8IW00 320 aa14.15□□□□□ -0.14
HDAC7-230ENST00000552960 NCOA7Q8NI08 942 aa14.15□□□□□ -0.14
HDAC7-230ENST00000552960 RIC1Q4ADV7 1423 aa14.15□□□□□ -0.14
HDAC7-230ENST00000552960 IKBKBO14920 756 aa14.15□□□□□ -0.14
HDAC7-230ENST00000552960 TBC1D9BQ66K14 1250 aa14.15□□□□□ -0.14
HDAC7-230ENST00000552960 CCDC102BQ68D86 513 aa14.15□□□□□ -0.14
HDAC7-230ENST00000552960 CC2D1AQ6P1N0 951 aaPredicted RBP14.15□□□□□ -0.14
HDAC7-230ENST00000552960 SRRTQ9BXP5 876 aaKnown RBP14.15□□□□□ -0.14
HDAC7-230ENST00000552960 PARD6BQ9BYG5 372 aa14.15□□□□□ -0.14
HDAC7-230ENST00000552960 CCNL1Q9UK58 526 aaPredicted RBP14.15□□□□□ -0.14
HDAC7-230ENST00000552960 HPS5Q9UPZ3 1129 aa14.15□□□□□ -0.14
HDAC7-230ENST00000552960 ANKRD18BA2A2Z9 1011 aa14.14□□□□□ -0.15
HDAC7-230ENST00000552960 ARHGAP6O43182 974 aa14.14□□□□□ -0.15
HDAC7-230ENST00000552960 NTSR2O95665 410 aa14.14□□□□□ -0.15
HDAC7-230ENST00000552960 CDC27P30260 824 aa14.14□□□□□ -0.15
HDAC7-230ENST00000552960 METAP2P50579 478 aaKnown RBP eCLIP14.14□□□□□ -0.151e-7■□□□□ 9.5
HDAC7-230ENST00000552960 PDE4BQ07343 736 aa14.14□□□□□ -0.15
HDAC7-230ENST00000552960 RAD51AP2Q09MP3 1159 aa14.14□□□□□ -0.15
HDAC7-230ENST00000552960 ERFEQ4G0M1 354 aa14.14□□□□□ -0.15
HDAC7-230ENST00000552960 KRT40Q6A162 431 aa14.14□□□□□ -0.15
HDAC7-230ENST00000552960 KLHL10Q6JEL2 608 aa14.14□□□□□ -0.15
HDAC7-230ENST00000552960 JMYQ8N9B5 988 aa14.14□□□□□ -0.15
HDAC7-230ENST00000552960 DHX58Q96C10 678 aa14.14□□□□□ -0.15
HDAC7-230ENST00000552960 PUS7LQ9H0K6 701 aaKnown RBP14.14□□□□□ -0.15
HDAC7-230ENST00000552960 QTRT2Q9H974 415 aaKnown RBP14.14□□□□□ -0.15
HDAC7-230ENST00000552960 LRRC4BQ9NT99 713 aa14.14□□□□□ -0.15
HDAC7-230ENST00000552960 CDHR2Q9BYE9 1310 aa14.14□□□□□ -0.15
HDAC7-230ENST00000552960 CIAO1O76071 339 aa14.14□□□□□ -0.15
HDAC7-230ENST00000552960 TBC1D8O95759 1140 aa14.14□□□□□ -0.15
HDAC7-230ENST00000552960 TRIM29Q14134 588 aa14.14□□□□□ -0.15
HDAC7-230ENST00000552960 CCDC158Q5M9N0 1113 aa14.14□□□□□ -0.15
HDAC7-230ENST00000552960 GRAMD1CQ8IYS0 662 aa14.14□□□□□ -0.15
HDAC7-230ENST00000552960 SMARCC1Q92922 1105 aaPredicted RBP14.14□□□□□ -0.15
HDAC7-230ENST00000552960 ZAP70P43403 619 aa14.13□□□□□ -0.15
HDAC7-230ENST00000552960 MTF1Q14872 753 aa14.13□□□□□ -0.15
HDAC7-230ENST00000552960 KCNH3Q9ULD8 1083 aa14.13□□□□□ -0.15
HDAC7-230ENST00000552960 NFE2L3Q9Y4A8 694 aa14.13□□□□□ -0.15
HDAC7-230ENST00000552960 TUBB4AP04350 444 aa14.13□□□□□ -0.15
HDAC7-230ENST00000552960 SKIDA1Q1XH10 827 aa14.13□□□□□ -0.15
HDAC7-230ENST00000552960 FOXP4Q8IVH2 680 aaPredicted RBP14.13□□□□□ -0.15
HDAC7-230ENST00000552960 C10orf67Q8IYJ2 551 aa14.13□□□□□ -0.15
HDAC7-230ENST00000552960 TOMM22Q9NS69 142 aa14.13□□□□□ -0.15
HDAC7-230ENST00000552960 ANTXR2P58335 489 aa14.13□□□□□ -0.15
HDAC7-230ENST00000552960 DHX8Q14562 1220 aaKnown RBP14.13□□□□□ -0.15
HDAC7-230ENST00000552960 METTL16Q86W50 562 aaKnown RBP14.13□□□□□ -0.15
HDAC7-230ENST00000552960 VGLL2Q8N8G2 317 aa14.13□□□□□ -0.15
HDAC7-230ENST00000552960 TPM1P09493 284 aa14.12□□□□□ -0.15
HDAC7-230ENST00000552960 INCENPQ9NQS7 918 aa14.12□□□□□ -0.15
HDAC7-230ENST00000552960 STX17P56962 302 aa14.12□□□□□ -0.15
HDAC7-230ENST00000552960 CPLX2Q6PUV4 134 aaKnown RBP14.12□□□□□ -0.15
HDAC7-230ENST00000552960 TXLNBQ8N3L3 684 aa14.12□□□□□ -0.15
HDAC7-230ENST00000552960 MPHOSPH8Q99549 860 aa14.12□□□□□ -0.15
HDAC7-230ENST00000552960 SENP2Q9HC62 589 aa14.12□□□□□ -0.15
HDAC7-230ENST00000552960 B4E1Z4 1266 aa14.11□□□□□ -0.15
HDAC7-230ENST00000552960 PHACTR2O75167 634 aa14.11□□□□□ -0.15
HDAC7-230ENST00000552960 MCAMP43121 646 aa14.11□□□□□ -0.15
HDAC7-230ENST00000552960 PHKA1P46020 1223 aa14.11□□□□□ -0.15
HDAC7-230ENST00000552960 KCNJ6P48051 423 aa14.11□□□□□ -0.15
HDAC7-230ENST00000552960 ZSCAN26Q16670 478 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms