RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.06■□□□□ 0.32
DDX54-210ENST00000552375 PTPN22Q9Y2R2 807 aa17.06■□□□□ 0.32
DDX54-210ENST00000552375 ZHX2Q9Y6X8 837 aa17.06■□□□□ 0.32
DDX54-210ENST00000552375 ADGRA2Q96PE1 1338 aa17.05■□□□□ 0.32
DDX54-210ENST00000552375 PDHXO00330 501 aa17.05■□□□□ 0.32
DDX54-210ENST00000552375 ARHGEF6Q15052 776 aa17.05■□□□□ 0.32
DDX54-210ENST00000552375 TMED8Q6PL24 325 aaPredicted RBP17.05■□□□□ 0.32
DDX54-210ENST00000552375 PARK7Q99497 189 aaKnown RBP17.05■□□□□ 0.32
DDX54-210ENST00000552375 LRRCC1Q9C099 1032 aa17.05■□□□□ 0.32
DDX54-210ENST00000552375 DHX36Q9H2U1 1008 aaKnown RBP17.05■□□□□ 0.32
DDX54-210ENST00000552375 HERC5Q9UII4 1024 aaKnown RBP17.05■□□□□ 0.32
DDX54-210ENST00000552375 AFG3L2Q9Y4W6 797 aa17.05■□□□□ 0.32
DDX54-210ENST00000552375 MYH1P12882 1939 aa17.05■□□□□ 0.32
DDX54-210ENST00000552375 ATAD5Q96QE3 1844 aa17.05■□□□□ 0.32
DDX54-210ENST00000552375 CENPFP49454 3210 aa17.04■□□□□ 0.32
DDX54-210ENST00000552375 DOCK1Q14185 1865 aa17.04■□□□□ 0.32
DDX54-210ENST00000552375 CYP7A1P22680 504 aa17.04■□□□□ 0.32
DDX54-210ENST00000552375 LACTBP83111 547 aaPredicted RBP17.04■□□□□ 0.32
DDX54-210ENST00000552375 CERS3Q8IU89 383 aa17.04■□□□□ 0.32
DDX54-210ENST00000552375 MAPKAPK5Q8IW41 473 aa17.04■□□□□ 0.32
DDX54-210ENST00000552375 TGFBRAP1Q8WUH2 860 aa17.04■□□□□ 0.32
DDX54-210ENST00000552375 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.04■□□□□ 0.32
DDX54-210ENST00000552375 BRCA2P51587 3418 aa17.03■□□□□ 0.32
DDX54-210ENST00000552375 MAP3K12Q12852 859 aa17.03■□□□□ 0.32
DDX54-210ENST00000552375 GPAT2Q6NUI2 795 aa17.03■□□□□ 0.32
DDX54-210ENST00000552375 C17orf99Q6UX52 265 aa17.03■□□□□ 0.32
DDX54-210ENST00000552375 FASTKD5Q7L8L6 764 aaKnown RBP17.03■□□□□ 0.32
DDX54-210ENST00000552375 MAGEB6Q8N7X4 407 aa17.03■□□□□ 0.32
DDX54-210ENST00000552375 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.03■□□□□ 0.32
DDX54-210ENST00000552375 DNAJC2Q99543 621 aaKnown RBP17.03■□□□□ 0.32
DDX54-210ENST00000552375 ANTXR1Q9H6X2 564 aa17.03■□□□□ 0.32
DDX54-210ENST00000552375 PI4KBQ9UBF8 816 aa17.03■□□□□ 0.32
DDX54-210ENST00000552375 SIPA1L1O43166 1804 aa17.03■□□□□ 0.32
DDX54-210ENST00000552375 TRIM75PA6NK02 468 aa17.02■□□□□ 0.32
DDX54-210ENST00000552375 DYNLL1P63167 89 aaKnown RBP17.02■□□□□ 0.32
DDX54-210ENST00000552375 KIF22Q14807 665 aa17.02■□□□□ 0.32
DDX54-210ENST00000552375 CCDC84Q86UT8 332 aaPredicted RBP17.02■□□□□ 0.32
DDX54-210ENST00000552375 ARMC5Q96C12 935 aa17.02■□□□□ 0.32
DDX54-210ENST00000552375 ARHGAP39Q9C0H5 1083 aa17.02■□□□□ 0.32
DDX54-210ENST00000552375 DCTPP1Q9H773 170 aa17.02■□□□□ 0.32
DDX54-210ENST00000552375 CPA4Q9UI42 421 aa17.02■□□□□ 0.32
DDX54-210ENST00000552375 SLC45A1Q9Y2W3 748 aa17.02■□□□□ 0.32
DDX54-210ENST00000552375 CAP2P40123 477 aa17.01■□□□□ 0.31
DDX54-210ENST00000552375 TTF1Q15361 905 aaPredicted RBP17.01■□□□□ 0.31
DDX54-210ENST00000552375 TSHZ3Q63HK5 1081 aa17.01■□□□□ 0.31
DDX54-210ENST00000552375 GADL1Q6ZQY3 521 aa17.01■□□□□ 0.31
DDX54-210ENST00000552375 METTL16Q86W50 562 aaKnown RBP17.01■□□□□ 0.31
DDX54-210ENST00000552375 MIGA1Q8NAN2 632 aa17.01■□□□□ 0.31
DDX54-210ENST00000552375 TBC1D2Q9BYX2 928 aa17.01■□□□□ 0.31
DDX54-210ENST00000552375 DNAJC18Q9H819 358 aa17.01■□□□□ 0.31
DDX54-210ENST00000552375 PDE4DIPQ5VU43 2346 aa17.01■□□□□ 0.31
DDX54-210ENST00000552375 GNRH1P01148 92 aa17■□□□□ 0.31
DDX54-210ENST00000552375 CYP2C8P10632 490 aa17■□□□□ 0.31
DDX54-210ENST00000552375 RRP1BQ14684 758 aaKnown RBP17■□□□□ 0.31
DDX54-210ENST00000552375 EDC3Q96F86 508 aaKnown RBP17■□□□□ 0.31
DDX54-210ENST00000552375 PTCH2Q9Y6C5 1203 aa17■□□□□ 0.31
DDX54-210ENST00000552375 DDX60LQ5H9U9 1706 aaKnown RBP16.99■□□□□ 0.31
DDX54-210ENST00000552375 GOLIM4O00461 696 aa16.99■□□□□ 0.31
DDX54-210ENST00000552375 HLA-DOAP06340 250 aa16.99■□□□□ 0.31
DDX54-210ENST00000552375 BCRP11274 1271 aa16.99■□□□□ 0.31
DDX54-210ENST00000552375 ZNF280CQ8ND82 737 aa16.99■□□□□ 0.31
DDX54-210ENST00000552375 BOLA2Q9H3K6 86 aa16.99■□□□□ 0.31
DDX54-210ENST00000552375 SAP30BPQ9UHR5 308 aaKnown RBP16.99■□□□□ 0.31
DDX54-210ENST00000552375 PALD1Q9ULE6 856 aa16.99■□□□□ 0.31
DDX54-210ENST00000552375 AGTPBP1Q9UPW5 1226 aa16.99■□□□□ 0.31
DDX54-210ENST00000552375 BAZ2AQ9UIF9 1905 aaKnown RBP16.99■□□□□ 0.31
DDX54-210ENST00000552375 MYH8P13535 1937 aa16.98■□□□□ 0.31
DDX54-210ENST00000552375 PDE6AP16499 860 aa16.98■□□□□ 0.31
DDX54-210ENST00000552375 USP5P45974 858 aa16.98■□□□□ 0.31
DDX54-210ENST00000552375 CRACR2BQ8N4Y2 399 aaPredicted RBP16.98■□□□□ 0.31
DDX54-210ENST00000552375 PROCA1Q8NCQ7 364 aaPredicted RBP16.98■□□□□ 0.31
DDX54-210ENST00000552375 ZNF333Q96JL9 665 aa16.98■□□□□ 0.31
DDX54-210ENST00000552375 TRIM47Q96LD4 638 aa16.98■□□□□ 0.31
DDX54-210ENST00000552375 RIOK1Q9BRS2 568 aaKnown RBP16.98■□□□□ 0.31
DDX54-210ENST00000552375 TRIM34Q9BYJ4 488 aa16.98■□□□□ 0.31
DDX54-210ENST00000552375 USP17L5A8MUK1 530 aa16.97■□□□□ 0.31
DDX54-210ENST00000552375 ASNSP08243 561 aa16.97■□□□□ 0.31
DDX54-210ENST00000552375 CTGFP29279 349 aa16.97■□□□□ 0.31
DDX54-210ENST00000552375 PSMC4P43686 418 aa16.97■□□□□ 0.31
DDX54-210ENST00000552375 PRMT2P55345 433 aa16.97■□□□□ 0.31
DDX54-210ENST00000552375 SPP2Q13103 211 aa16.97■□□□□ 0.31
DDX54-210ENST00000552375 SLC9C1Q4G0N8 1177 aa16.97■□□□□ 0.31
DDX54-210ENST00000552375 FOXP4Q8IVH2 680 aaPredicted RBP16.97■□□□□ 0.31
DDX54-210ENST00000552375 OTUD7AQ8TE49 926 aaPredicted RBP16.97■□□□□ 0.31
DDX54-210ENST00000552375 AS3MTQ9HBK9 375 aa16.97■□□□□ 0.31
DDX54-210ENST00000552375 PHIPQ8WWQ0 1821 aa16.97■□□□□ 0.31
DDX54-210ENST00000552375 PTPRFP10586 1907 aa16.96■□□□□ 0.31
DDX54-210ENST00000552375 KIAA0100Q14667 2235 aaKnown RBP16.96■□□□□ 0.31
DDX54-210ENST00000552375 HMGCS2P54868 508 aa16.96■□□□□ 0.31
DDX54-210ENST00000552375 SLC4A8Q2Y0W8 1093 aa16.96■□□□□ 0.31
DDX54-210ENST00000552375 TREML2Q5T2D2 321 aa16.96■□□□□ 0.31
DDX54-210ENST00000552375 SLC9C2Q5TAH2 1124 aa16.96■□□□□ 0.31
DDX54-210ENST00000552375 SMCR8Q8TEV9 937 aaPredicted RBP16.96■□□□□ 0.31
DDX54-210ENST00000552375 EHD4Q9H223 541 aa16.96■□□□□ 0.31
DDX54-210ENST00000552375 GINM1Q9NU53 330 aa16.96■□□□□ 0.31
DDX54-210ENST00000552375 PNMA3Q9UL41 463 aa16.96■□□□□ 0.31
DDX54-210ENST00000552375 ZBTB21Q9ULJ3 1066 aa16.96■□□□□ 0.31
DDX54-210ENST00000552375 TNRC18O15417 2968 aaPredicted RBP16.96■□□□□ 0.31
DDX54-210ENST00000552375 MKI67P46013 3256 aaKnown RBP16.96■□□□□ 0.31
DDX54-210ENST00000552375 ZSWIM8A7E2V4 1837 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms