RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 ARMC5Q96C12 935 aa20.9■□□□□ 0.94
CDK4-208ENST00000551706 SLC10A4Q96EP9 437 aa20.9■□□□□ 0.94
CDK4-208ENST00000551706 ERO1AQ96HE7 468 aa20.9■□□□□ 0.94
CDK4-208ENST00000551706 FLT1P17948 1338 aa20.89■□□□□ 0.93
CDK4-208ENST00000551706 DDTLA6NHG4 134 aaPredicted RBP20.89■□□□□ 0.93
CDK4-208ENST00000551706 MANSC4A6NHS7 340 aaPredicted RBP20.89■□□□□ 0.93
CDK4-208ENST00000551706 USP5P45974 858 aa20.89■□□□□ 0.93
CDK4-208ENST00000551706 MAP3K9P80192 1104 aa20.89■□□□□ 0.93
CDK4-208ENST00000551706 MIGA2Q7L4E1 593 aa20.89■□□□□ 0.93
CDK4-208ENST00000551706 SH3BP5LQ7L8J4 393 aa20.89■□□□□ 0.93
CDK4-208ENST00000551706 IFNL1Q8IU54 200 aa20.89■□□□□ 0.93
CDK4-208ENST00000551706 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.89■□□□□ 0.931e-7■■■■□ 25.5
CDK4-208ENST00000551706 CRNKL1Q9BZJ0 848 aaKnown RBP20.89■□□□□ 0.93
CDK4-208ENST00000551706 OSBPL3Q9H4L5 887 aa20.89■□□□□ 0.93
CDK4-208ENST00000551706 CSADQ9Y600 493 aa20.89■□□□□ 0.93
CDK4-208ENST00000551706 MAP3K10Q02779 954 aa20.88■□□□□ 0.93
CDK4-208ENST00000551706 MAPKAPK5Q8IW41 473 aa20.88■□□□□ 0.93
CDK4-208ENST00000551706 EVI5LQ96CN4 794 aa20.88■□□□□ 0.93
CDK4-208ENST00000551706 WRNIP1Q96S55 665 aa20.88■□□□□ 0.93
CDK4-208ENST00000551706 TMEM106CQ9BVX2 250 aa20.88■□□□□ 0.93
CDK4-208ENST00000551706 RNF113AO15541 343 aaKnown RBP20.87■□□□□ 0.93
CDK4-208ENST00000551706 TBC1D12O60347 775 aa20.87■□□□□ 0.93
CDK4-208ENST00000551706 TICAM2Q86XR7 235 aa20.87■□□□□ 0.93
CDK4-208ENST00000551706 PLEKHM2Q8IWE5 1019 aa20.87■□□□□ 0.93
CDK4-208ENST00000551706 APPBP2Q92624 585 aa20.87■□□□□ 0.93
CDK4-208ENST00000551706 FSD1Q9BTV5 496 aa20.87■□□□□ 0.93
CDK4-208ENST00000551706 PI4KBQ9UBF8 816 aa20.87■□□□□ 0.93
CDK4-208ENST00000551706 TRIOBPQ9H2D6 2365 aa20.87■□□□□ 0.93
CDK4-208ENST00000551706 VGLL4Q14135 290 aa20.86■□□□□ 0.93
CDK4-208ENST00000551706 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.86■□□□□ 0.93
CDK4-208ENST00000551706 CD99L2Q8TCZ2 262 aa20.86■□□□□ 0.93
CDK4-208ENST00000551706 CLMNQ96JQ2 1002 aa20.86■□□□□ 0.93
CDK4-208ENST00000551706 ZNF112Q9UJU3 913 aa20.86■□□□□ 0.93
CDK4-208ENST00000551706 CEP290O15078 2479 aa20.85■□□□□ 0.93
CDK4-208ENST00000551706 DLL1O00548 723 aa20.85■□□□□ 0.93
CDK4-208ENST00000551706 MBD4O95243 580 aa20.85■□□□□ 0.93
CDK4-208ENST00000551706 HLA-DOAP06340 250 aa20.85■□□□□ 0.93
CDK4-208ENST00000551706 ZBTB48P10074 688 aaPredicted RBP20.85■□□□□ 0.93
CDK4-208ENST00000551706 LCORLQ8N3X6 602 aa20.85■□□□□ 0.93
CDK4-208ENST00000551706 EFCC1Q9HA90 598 aa20.85■□□□□ 0.93
CDK4-208ENST00000551706 HERC5Q9UII4 1024 aaKnown RBP20.85■□□□□ 0.93
CDK4-208ENST00000551706 IGF2BP3O00425 579 aaKnown RBP eCLIP20.84■□□□□ 0.93
CDK4-208ENST00000551706 SLFNL1Q499Z3 407 aa20.84■□□□□ 0.93
CDK4-208ENST00000551706 CENPQQ7L2Z9 268 aaPredicted RBP20.84■□□□□ 0.93
CDK4-208ENST00000551706 ARMT1Q9H993 441 aa20.84■□□□□ 0.93
CDK4-208ENST00000551706 FOXP4Q8IVH2 680 aaPredicted RBP20.83■□□□□ 0.93
CDK4-208ENST00000551706 WNK4Q96J92 1243 aa20.83■□□□□ 0.93
CDK4-208ENST00000551706 PUS7LQ9H0K6 701 aaKnown RBP20.83■□□□□ 0.93
CDK4-208ENST00000551706 ELP3Q9H9T3 547 aa20.83■□□□□ 0.93
CDK4-208ENST00000551706 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.83■□□□□ 0.93
CDK4-208ENST00000551706 ATP8A2Q9NTI2 1148 aa20.83■□□□□ 0.93
CDK4-208ENST00000551706 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.83■□□□□ 0.93
CDK4-208ENST00000551706 PALD1Q9ULE6 856 aa20.83■□□□□ 0.93
CDK4-208ENST00000551706 TRIM6-TRIM34B2RNG4 842 aa20.82■□□□□ 0.92
CDK4-208ENST00000551706 H0YGN5 161 aa20.82■□□□□ 0.92
CDK4-208ENST00000551706 CHGBP05060 677 aa20.82■□□□□ 0.92
CDK4-208ENST00000551706 NOL9Q5SY16 702 aaKnown RBP20.82■□□□□ 0.92
CDK4-208ENST00000551706 TTC6Q86TZ1 520 aa20.82■□□□□ 0.92
CDK4-208ENST00000551706 METTL16Q86W50 562 aaKnown RBP20.82■□□□□ 0.92
CDK4-208ENST00000551706 ZKSCAN4Q969J2 545 aaPredicted RBP20.82■□□□□ 0.92
CDK4-208ENST00000551706 OTUD5Q96G74 571 aa20.82■□□□□ 0.92
CDK4-208ENST00000551706 DDRGK1Q96HY6 314 aa20.82■□□□□ 0.92
CDK4-208ENST00000551706 ZNF333Q96JL9 665 aa20.82■□□□□ 0.92
CDK4-208ENST00000551706 TRIM34Q9BYJ4 488 aa20.82■□□□□ 0.92
CDK4-208ENST00000551706 SAP30BPQ9UHR5 308 aaKnown RBP20.82■□□□□ 0.92
CDK4-208ENST00000551706 AK9Q5TCS8 1911 aa20.82■□□□□ 0.92
CDK4-208ENST00000551706 SPDYE5A6NIY4 337 aa20.81■□□□□ 0.92
CDK4-208ENST00000551706 PHF20L1A8MW92 1017 aa20.81■□□□□ 0.92
CDK4-208ENST00000551706 PDE4AP27815 886 aa20.81■□□□□ 0.92
CDK4-208ENST00000551706 INPP5BP32019 993 aa20.81■□□□□ 0.92
CDK4-208ENST00000551706 OTUD7BQ6GQQ9 843 aa20.81■□□□□ 0.92
CDK4-208ENST00000551706 ERO1BQ86YB8 467 aa20.81■□□□□ 0.92
CDK4-208ENST00000551706 CRACR2BQ8N4Y2 399 aaPredicted RBP20.81■□□□□ 0.92
CDK4-208ENST00000551706 SDR42E1Q8WUS8 393 aa20.81■□□□□ 0.92
CDK4-208ENST00000551706 OSBP2Q969R2 916 aa20.81■□□□□ 0.92
CDK4-208ENST00000551706 OPTNQ96CV9 577 aa20.81■□□□□ 0.92
CDK4-208ENST00000551706 DCP1AQ9NPI6 582 aaPredicted RBP20.81■□□□□ 0.92
CDK4-208ENST00000551706 SNCAIPQ9Y6H5 919 aa20.81■□□□□ 0.92
CDK4-208ENST00000551706 MYH7P12883 1935 aa20.8■□□□□ 0.92
CDK4-208ENST00000551706 CTNND1O60716 968 aaKnown RBP20.8■□□□□ 0.92
CDK4-208ENST00000551706 POLR3DP05423 398 aaPredicted RBP20.8■□□□□ 0.92
CDK4-208ENST00000551706 GNAT2P19087 354 aa20.8■□□□□ 0.92
CDK4-208ENST00000551706 SP3Q02447 781 aa20.8■□□□□ 0.92
CDK4-208ENST00000551706 CRHR2Q13324 411 aa20.8■□□□□ 0.92
CDK4-208ENST00000551706 ZMYM1Q5SVZ6 1142 aa20.8■□□□□ 0.92
CDK4-208ENST00000551706 ERICH6BQ5W0A0 696 aa20.8■□□□□ 0.92
CDK4-208ENST00000551706 SLC17A8Q8NDX2 589 aa20.8■□□□□ 0.92
CDK4-208ENST00000551706 CCDC136Q96JN2 1154 aa20.8■□□□□ 0.92
CDK4-208ENST00000551706 STRBPQ96SI9 672 aaKnown RBP20.8■□□□□ 0.92
CDK4-208ENST00000551706 EHD4Q9H223 541 aa20.8■□□□□ 0.92
CDK4-208ENST00000551706 SLC4A4Q9Y6R1 1079 aa20.8■□□□□ 0.92
CDK4-208ENST00000551706 FOCADQ5VW36 1801 aa20.8■□□□□ 0.92
CDK4-208ENST00000551706 LAMB1P07942 1786 aa20.8■□□□□ 0.92
CDK4-208ENST00000551706 NBPF11Q86T75 865 aa20.79■□□□□ 0.92
CDK4-208ENST00000551706 AMOTL1Q8IY63 956 aa20.79■□□□□ 0.92
CDK4-208ENST00000551706 SCYL3Q8IZE3 742 aa20.79■□□□□ 0.92
CDK4-208ENST00000551706 RILPL2Q969X0 211 aa20.79■□□□□ 0.92
CDK4-208ENST00000551706 PICK1Q9NRD5 415 aa20.79■□□□□ 0.92
CDK4-208ENST00000551706 MCM9Q9NXL9 1143 aa20.79■□□□□ 0.92
CDK4-208ENST00000551706 SERPINB13Q9UIV8 391 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms