RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 JAG1P78504 1218 aa15.92■□□□□ 0.14
NPAS3-209ENST00000551008 SP3Q02447 781 aa15.92■□□□□ 0.14
NPAS3-209ENST00000551008 SHROOM1Q2M3G4 852 aaPredicted RBP15.92■□□□□ 0.14
NPAS3-209ENST00000551008 MAPKAPK5Q8IW41 473 aa15.92■□□□□ 0.14
NPAS3-209ENST00000551008 EDC3Q96F86 508 aaKnown RBP15.92■□□□□ 0.14
NPAS3-209ENST00000551008 RNF39Q9H2S5 420 aa15.92■□□□□ 0.14
NPAS3-209ENST00000551008 TRIM17Q9Y577 477 aa15.92■□□□□ 0.14
NPAS3-209ENST00000551008 PDE4DIPQ5VU43 2346 aa15.92■□□□□ 0.14
NPAS3-209ENST00000551008 A0A0G2JLL6 359 aaPredicted RBP15.91■□□□□ 0.14
NPAS3-209ENST00000551008 TLR2O60603 784 aa15.91■□□□□ 0.14
NPAS3-209ENST00000551008 CTNND1O60716 968 aaKnown RBP15.91■□□□□ 0.14
NPAS3-209ENST00000551008 HMMRO75330 724 aa15.91■□□□□ 0.14
NPAS3-209ENST00000551008 IDH1O75874 414 aaKnown RBP15.91■□□□□ 0.14
NPAS3-209ENST00000551008 CYP7A1P22680 504 aa15.91■□□□□ 0.14
NPAS3-209ENST00000551008 CTGFP29279 349 aa15.91■□□□□ 0.14
NPAS3-209ENST00000551008 PRRT2Q7Z6L0 340 aaPredicted RBP15.91■□□□□ 0.14
NPAS3-209ENST00000551008 ANKRD23Q86SG2 305 aa15.91■□□□□ 0.14
NPAS3-209ENST00000551008 METTL16Q86W50 562 aaKnown RBP15.91■□□□□ 0.14
NPAS3-209ENST00000551008 MAGEB6Q8N7X4 407 aa15.91■□□□□ 0.14
NPAS3-209ENST00000551008 TGFBRAP1Q8WUH2 860 aa15.91■□□□□ 0.14
NPAS3-209ENST00000551008 ERO1AQ96HE7 468 aa15.91■□□□□ 0.14
NPAS3-209ENST00000551008 ARHGAP39Q9C0H5 1083 aa15.91■□□□□ 0.14
NPAS3-209ENST00000551008 ZFYVE28Q9HCC9 887 aa15.91■□□□□ 0.14
NPAS3-209ENST00000551008 ZHX2Q9Y6X8 837 aa15.91■□□□□ 0.14
NPAS3-209ENST00000551008 BAZ2AQ9UIF9 1905 aaKnown RBP15.91■□□□□ 0.14
NPAS3-209ENST00000551008 CXCL11O14625 94 aa15.9■□□□□ 0.14
NPAS3-209ENST00000551008 IGSF3O75054 1194 aa15.9■□□□□ 0.14
NPAS3-209ENST00000551008 RAB11FIP3O75154 756 aa15.9■□□□□ 0.14
NPAS3-209ENST00000551008 C17orf99Q6UX52 265 aa15.9■□□□□ 0.14
NPAS3-209ENST00000551008 MIGA1Q8NAN2 632 aa15.9■□□□□ 0.14
NPAS3-209ENST00000551008 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.9■□□□□ 0.14
NPAS3-209ENST00000551008 RIOK1Q9BRS2 568 aaKnown RBP15.9■□□□□ 0.14
NPAS3-209ENST00000551008 TCRBV5S4A2TA0A5A2 114 aa15.89■□□□□ 0.13
NPAS3-209ENST00000551008 PDHXO00330 501 aa15.89■□□□□ 0.13
NPAS3-209ENST00000551008 BAG3O95817 575 aa15.89■□□□□ 0.13
NPAS3-209ENST00000551008 CLASRPQ8N2M8 674 aaKnown RBP15.89■□□□□ 0.13
NPAS3-209ENST00000551008 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.89■□□□□ 0.13
NPAS3-209ENST00000551008 PALD1Q9ULE6 856 aa15.89■□□□□ 0.13
NPAS3-209ENST00000551008 PTPN22Q9Y2R2 807 aa15.89■□□□□ 0.13
NPAS3-209ENST00000551008 MKI67P46013 3256 aaKnown RBP15.88■□□□□ 0.13
NPAS3-209ENST00000551008 SMARCA5O60264 1052 aaPredicted RBP15.88■□□□□ 0.13
NPAS3-209ENST00000551008 CHGBP05060 677 aa15.88■□□□□ 0.13
NPAS3-209ENST00000551008 PLCG2P16885 1265 aa15.88■□□□□ 0.13
NPAS3-209ENST00000551008 CAP2P40123 477 aa15.88■□□□□ 0.13
NPAS3-209ENST00000551008 EVX2Q03828 476 aa15.88■□□□□ 0.13
NPAS3-209ENST00000551008 SLFNL1Q499Z3 407 aa15.88■□□□□ 0.13
NPAS3-209ENST00000551008 EFCC1Q9HA90 598 aa15.88■□□□□ 0.13
NPAS3-209ENST00000551008 PICK1Q9NRD5 415 aa15.88■□□□□ 0.13
NPAS3-209ENST00000551008 SAP30BPQ9UHR5 308 aaKnown RBP15.88■□□□□ 0.13
NPAS3-209ENST00000551008 CPA4Q9UI42 421 aa15.88■□□□□ 0.13
NPAS3-209ENST00000551008 MYH8P13535 1937 aa15.88■□□□□ 0.13
NPAS3-209ENST00000551008 PDE6AP16499 860 aa15.87■□□□□ 0.13
NPAS3-209ENST00000551008 LACTBP83111 547 aaPredicted RBP15.87■□□□□ 0.13
NPAS3-209ENST00000551008 SLC4A8Q2Y0W8 1093 aa15.87■□□□□ 0.13
NPAS3-209ENST00000551008 NOL10Q9BSC4 688 aaKnown RBP15.87■□□□□ 0.13
NPAS3-209ENST00000551008 CHMP4BQ9H444 224 aaKnown RBP15.87■□□□□ 0.13
NPAS3-209ENST00000551008 PI4KBQ9UBF8 816 aa15.87■□□□□ 0.13
NPAS3-209ENST00000551008 HERC5Q9UII4 1024 aaKnown RBP15.87■□□□□ 0.13
NPAS3-209ENST00000551008 PCDHB15Q9Y5E8 787 aa15.87■□□□□ 0.13
NPAS3-209ENST00000551008 TRIM75PA6NK02 468 aa15.86■□□□□ 0.13
NPAS3-209ENST00000551008 GOLIM4O00461 696 aa15.86■□□□□ 0.13
NPAS3-209ENST00000551008 IFIT2P09913 472 aaKnown RBP15.86■□□□□ 0.13
NPAS3-209ENST00000551008 CYP2C8P10632 490 aa15.86■□□□□ 0.13
NPAS3-209ENST00000551008 BCRP11274 1271 aa15.86■□□□□ 0.13
NPAS3-209ENST00000551008 ATP5JP18859 108 aa15.86■□□□□ 0.13
NPAS3-209ENST00000551008 MAP3K12Q12852 859 aa15.86■□□□□ 0.13
NPAS3-209ENST00000551008 TREML2Q5T2D2 321 aa15.86■□□□□ 0.13
NPAS3-209ENST00000551008 DNAJC2Q99543 621 aaKnown RBP15.86■□□□□ 0.13
NPAS3-209ENST00000551008 DHX36Q9H2U1 1008 aaKnown RBP15.86■□□□□ 0.13
NPAS3-209ENST00000551008 RRP1P56182 461 aaKnown RBP15.85■□□□□ 0.13
NPAS3-209ENST00000551008 MLLT1Q03111 559 aaPredicted RBP15.85■□□□□ 0.13
NPAS3-209ENST00000551008 GADL1Q6ZQY3 521 aa15.85■□□□□ 0.13
NPAS3-209ENST00000551008 TRIM47Q96LD4 638 aa15.85■□□□□ 0.13
NPAS3-209ENST00000551008 BCL11AQ9H165 835 aa15.85■□□□□ 0.13
NPAS3-209ENST00000551008 BOLA2Q9H3K6 86 aa15.85■□□□□ 0.13
NPAS3-209ENST00000551008 DCTPP1Q9H773 170 aa15.85■□□□□ 0.13
NPAS3-209ENST00000551008 PTCH2Q9Y6C5 1203 aa15.85■□□□□ 0.13
NPAS3-209ENST00000551008 PLXNB2O15031 1838 aa15.84■□□□□ 0.13
NPAS3-209ENST00000551008 SPP2Q13103 211 aa15.84■□□□□ 0.13
NPAS3-209ENST00000551008 SLC9C2Q5TAH2 1124 aa15.84■□□□□ 0.13
NPAS3-209ENST00000551008 ARMC5Q96C12 935 aa15.84■□□□□ 0.13
NPAS3-209ENST00000551008 HAUS7Q99871 368 aa15.84■□□□□ 0.13
NPAS3-209ENST00000551008 LRRCC1Q9C099 1032 aa15.84■□□□□ 0.13
NPAS3-209ENST00000551008 ZNF532Q9HCE3 1301 aa15.84■□□□□ 0.13
NPAS3-209ENST00000551008 ECM2O94769 699 aaPredicted RBP15.83■□□□□ 0.12
NPAS3-209ENST00000551008 GDF11O95390 407 aa15.83■□□□□ 0.12
NPAS3-209ENST00000551008 TTF1Q15361 905 aaPredicted RBP15.83■□□□□ 0.12
NPAS3-209ENST00000551008 TMED8Q6PL24 325 aaPredicted RBP15.83■□□□□ 0.12
NPAS3-209ENST00000551008 FASTKD5Q7L8L6 764 aaKnown RBP15.83■□□□□ 0.12
NPAS3-209ENST00000551008 FOXP4Q8IVH2 680 aaPredicted RBP15.83■□□□□ 0.12
NPAS3-209ENST00000551008 LCORLQ8N3X6 602 aa15.83■□□□□ 0.12
NPAS3-209ENST00000551008 ZNF280CQ8ND82 737 aa15.83■□□□□ 0.12
NPAS3-209ENST00000551008 PAG1Q9NWQ8 432 aa15.83■□□□□ 0.12
NPAS3-209ENST00000551008 AGTPBP1Q9UPW5 1226 aa15.83■□□□□ 0.12
NPAS3-209ENST00000551008 SLC45A1Q9Y2W3 748 aa15.83■□□□□ 0.12
NPAS3-209ENST00000551008 POTEFA5A3E0 1075 aa15.82■□□□□ 0.12
NPAS3-209ENST00000551008 USP17L5A8MUK1 530 aa15.82■□□□□ 0.12
NPAS3-209ENST00000551008 ADD2P35612 726 aa15.82■□□□□ 0.12
NPAS3-209ENST00000551008 PLCD1P51178 756 aa15.82■□□□□ 0.12
NPAS3-209ENST00000551008 HMGCS2P54868 508 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms