RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 MYPNQ86TC9 1320 aa16.41■□□□□ 0.22
NUP188-211ENST00000550219 GNRH1P01148 92 aa16.4■□□□□ 0.22
NUP188-211ENST00000550219 PRMT2P55345 433 aa16.4■□□□□ 0.22
NUP188-211ENST00000550219 ATP8B2P98198 1209 aa16.4■□□□□ 0.22
NUP188-211ENST00000550219 SSH3Q8TE77 659 aa16.4■□□□□ 0.22
NUP188-211ENST00000550219 AATFQ9NY61 560 aaKnown RBP eCLIP16.4■□□□□ 0.22
NUP188-211ENST00000550219 TLR7Q9NYK1 1049 aaKnown RBP16.4■□□□□ 0.22
NUP188-211ENST00000550219 SRRDQ9UH36 339 aa16.4■□□□□ 0.22
NUP188-211ENST00000550219 COL2A1P02458 1487 aaPredicted RBP16.4■□□□□ 0.22
NUP188-211ENST00000550219 PHIPQ8WWQ0 1821 aa16.4■□□□□ 0.22
NUP188-211ENST00000550219 PTPRFP10586 1907 aa16.39■□□□□ 0.21
NUP188-211ENST00000550219 HOXD10P28358 340 aa16.39■□□□□ 0.21
NUP188-211ENST00000550219 FCGRTP55899 365 aa16.39■□□□□ 0.21
NUP188-211ENST00000550219 SMCR8Q8TEV9 937 aaPredicted RBP16.39■□□□□ 0.21
NUP188-211ENST00000550219 GPR108Q9NPR9 543 aa16.39■□□□□ 0.21
NUP188-211ENST00000550219 ATAD5Q96QE3 1844 aa16.39■□□□□ 0.21
NUP188-211ENST00000550219 BCRP11274 1271 aa16.38■□□□□ 0.21
NUP188-211ENST00000550219 ZAP70P43403 619 aa16.38■□□□□ 0.21
NUP188-211ENST00000550219 MAP3K10Q02779 954 aa16.38■□□□□ 0.21
NUP188-211ENST00000550219 PRKCZQ05513 592 aa16.38■□□□□ 0.21
NUP188-211ENST00000550219 MAPKAPK5Q8IW41 473 aa16.38■□□□□ 0.21
NUP188-211ENST00000550219 CCDC8Q9H0W5 538 aaPredicted RBP16.38■□□□□ 0.21
NUP188-211ENST00000550219 BIN2Q9UBW5 565 aaPredicted RBP16.38■□□□□ 0.21
NUP188-211ENST00000550219 NPM3O75607 178 aaKnown RBP16.37■□□□□ 0.21
NUP188-211ENST00000550219 BAG3O95817 575 aa16.37■□□□□ 0.21
NUP188-211ENST00000550219 MAP4K4O95819 1239 aaPredicted RBP16.37■□□□□ 0.21
NUP188-211ENST00000550219 CYP2E1P05181 493 aaPredicted RBP16.37■□□□□ 0.21
NUP188-211ENST00000550219 MTFR1Q15390 333 aa16.37■□□□□ 0.21
NUP188-211ENST00000550219 RPAP2Q8IXW5 612 aaPredicted RBP16.37■□□□□ 0.21
NUP188-211ENST00000550219 DBNLQ9UJU6 430 aaKnown RBP16.37■□□□□ 0.21
NUP188-211ENST00000550219 AGTPBP1Q9UPW5 1226 aa16.37■□□□□ 0.21
NUP188-211ENST00000550219 PCDHB15Q9Y5E8 787 aa16.37■□□□□ 0.21
NUP188-211ENST00000550219 SIPA1L1O43166 1804 aa16.37■□□□□ 0.21
NUP188-211ENST00000550219 LOC285556D6RIA3 1793 aa16.36■□□□□ 0.21
NUP188-211ENST00000550219 TBC1D12O60347 775 aa16.36■□□□□ 0.21
NUP188-211ENST00000550219 GRK4P32298 578 aa16.36■□□□□ 0.21
NUP188-211ENST00000550219 TREML2Q5T2D2 321 aa16.36■□□□□ 0.21
NUP188-211ENST00000550219 CEP85Q6P2H3 762 aa16.36■□□□□ 0.21
NUP188-211ENST00000550219 ADGRA1Q86SQ6 560 aa16.36■□□□□ 0.21
NUP188-211ENST00000550219 TGFBRAP1Q8WUH2 860 aa16.36■□□□□ 0.21
NUP188-211ENST00000550219 PIH1D3Q9NQM4 214 aaKnown RBP16.36■□□□□ 0.21
NUP188-211ENST00000550219 TAOK2Q9UL54 1235 aa16.36■□□□□ 0.21
NUP188-211ENST00000550219 GABRQQ9UN88 632 aa16.36■□□□□ 0.21
NUP188-211ENST00000550219 FLT1P17948 1338 aa16.36■□□□□ 0.21
NUP188-211ENST00000550219 MGAMO43451 1857 aa16.35■□□□□ 0.21
NUP188-211ENST00000550219 IDH1O75874 414 aaKnown RBP16.35■□□□□ 0.21
NUP188-211ENST00000550219 PLCG2P16885 1265 aa16.35■□□□□ 0.21
NUP188-211ENST00000550219 SPP2Q13103 211 aa16.35■□□□□ 0.21
NUP188-211ENST00000550219 RRP1BQ14684 758 aaKnown RBP16.35■□□□□ 0.21
NUP188-211ENST00000550219 SIRT2Q8IXJ6 389 aa16.35■□□□□ 0.21
NUP188-211ENST00000550219 CRACR2BQ8N4Y2 399 aaPredicted RBP16.35■□□□□ 0.21
NUP188-211ENST00000550219 TRIM34Q9BYJ4 488 aa16.35■□□□□ 0.21
NUP188-211ENST00000550219 SAP30BPQ9UHR5 308 aaKnown RBP16.35■□□□□ 0.21
NUP188-211ENST00000550219 EXOC6BQ9Y2D4 811 aa16.35■□□□□ 0.21
NUP188-211ENST00000550219 SLC45A1Q9Y2W3 748 aa16.35■□□□□ 0.21
NUP188-211ENST00000550219 MYO5AQ9Y4I1 1855 aaKnown RBP16.35■□□□□ 0.21
NUP188-211ENST00000550219 CDK5RAP2Q96SN8 1893 aa16.34■□□□□ 0.21
NUP188-211ENST00000550219 TNPO2O14787 897 aaKnown RBP16.34■□□□□ 0.21
NUP188-211ENST00000550219 CAP2P40123 477 aa16.34■□□□□ 0.21
NUP188-211ENST00000550219 HMGCS2P54868 508 aa16.34■□□□□ 0.21
NUP188-211ENST00000550219 DYNLL1P63167 89 aaKnown RBP16.34■□□□□ 0.21
NUP188-211ENST00000550219 ANKRD13CQ8N6S4 541 aa16.34■□□□□ 0.21
NUP188-211ENST00000550219 ZNF280CQ8ND82 737 aa16.34■□□□□ 0.21
NUP188-211ENST00000550219 EAF2Q96CJ1 260 aaPredicted RBP16.34■□□□□ 0.21
NUP188-211ENST00000550219 BCL11AQ9H165 835 aa16.34■□□□□ 0.21
NUP188-211ENST00000550219 HERC5Q9UII4 1024 aaKnown RBP16.34■□□□□ 0.21
NUP188-211ENST00000550219 PNMA3Q9UL41 463 aa16.34■□□□□ 0.21
NUP188-211ENST00000550219 NOP58Q9Y2X3 529 aaKnown RBP16.34■□□□□ 0.21
NUP188-211ENST00000550219 NDUFB9Q9Y6M9 179 aa16.34■□□□□ 0.21
NUP188-211ENST00000550219 CENPFP49454 3210 aa16.34■□□□□ 0.21
NUP188-211ENST00000550219 FOCADQ5VW36 1801 aa16.33■□□□□ 0.21
NUP188-211ENST00000550219 USP17L5A8MUK1 530 aa16.33■□□□□ 0.2
NUP188-211ENST00000550219 CCL5P13501 91 aa16.33■□□□□ 0.2
NUP188-211ENST00000550219 CYP7A1P22680 504 aa16.33■□□□□ 0.2
NUP188-211ENST00000550219 UBXN2AP68543 259 aa16.33■□□□□ 0.2
NUP188-211ENST00000550219 AACSQ86V21 672 aa16.33■□□□□ 0.2
NUP188-211ENST00000550219 MIGA1Q8NAN2 632 aa16.33■□□□□ 0.2
NUP188-211ENST00000550219 PROCA1Q8NCQ7 364 aaPredicted RBP16.33■□□□□ 0.2
NUP188-211ENST00000550219 SLAIN1Q8ND83 568 aa16.33■□□□□ 0.2
NUP188-211ENST00000550219 GCC1Q96CN9 775 aa16.33■□□□□ 0.2
NUP188-211ENST00000550219 SHISA4Q96DD7 197 aa16.33■□□□□ 0.2
NUP188-211ENST00000550219 DHX36Q9H2U1 1008 aaKnown RBP16.33■□□□□ 0.2
NUP188-211ENST00000550219 AS3MTQ9HBK9 375 aa16.33■□□□□ 0.2
NUP188-211ENST00000550219 PI4KBQ9UBF8 816 aa16.33■□□□□ 0.2
NUP188-211ENST00000550219 GDF11O95390 407 aa16.32■□□□□ 0.2
NUP188-211ENST00000550219 ELNP15502 786 aa16.32■□□□□ 0.2
NUP188-211ENST00000550219 HDAC1Q13547 482 aaPredicted RBP16.32■□□□□ 0.2
NUP188-211ENST00000550219 MTMR2Q13614 643 aa16.32■□□□□ 0.2
NUP188-211ENST00000550219 SHROOM1Q2M3G4 852 aaPredicted RBP16.32■□□□□ 0.2
NUP188-211ENST00000550219 ZNF512BQ96KM6 892 aaPredicted RBP16.32■□□□□ 0.2
NUP188-211ENST00000550219 DNAJC18Q9H819 358 aa16.32■□□□□ 0.2
NUP188-211ENST00000550219 PALD1Q9ULE6 856 aa16.32■□□□□ 0.2
NUP188-211ENST00000550219 KIAA0100Q14667 2235 aaKnown RBP16.31■□□□□ 0.2
NUP188-211ENST00000550219 APBB1O00213 710 aa16.31■□□□□ 0.2
NUP188-211ENST00000550219 ADCY3O60266 1144 aa16.31■□□□□ 0.2
NUP188-211ENST00000550219 HLA-DOAP06340 250 aa16.31■□□□□ 0.2
NUP188-211ENST00000550219 FLT3LGP49771 235 aa16.31■□□□□ 0.2
NUP188-211ENST00000550219 PPP4CP60510 307 aa16.31■□□□□ 0.2
NUP188-211ENST00000550219 PABPC4Q13310 644 aaKnown RBP eCLIP16.31■□□□□ 0.2
NUP188-211ENST00000550219 ERC1Q8IUD2 1116 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms