RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 ARID4AP29374 1257 aaPredicted RBP16.72■□□□□ 0.27
TROAP-211ENST00000549891 FAM110CQ1W6H9 321 aa16.72■□□□□ 0.27
TROAP-211ENST00000549891 CHRDL2Q6WN34 429 aa16.72■□□□□ 0.27
TROAP-211ENST00000549891 UBE2Q1Q7Z7E8 422 aa16.72■□□□□ 0.27
TROAP-211ENST00000549891 UNC93B1Q9H1C4 597 aa16.72■□□□□ 0.27
TROAP-211ENST00000549891 FARP2O94887 1054 aaPredicted RBP16.71■□□□□ 0.27
TROAP-211ENST00000549891 INHAP05111 366 aa16.71■□□□□ 0.27
TROAP-211ENST00000549891 GCLCP48506 637 aaPredicted RBP16.71■□□□□ 0.27
TROAP-211ENST00000549891 ANKRD13CQ8N6S4 541 aa16.71■□□□□ 0.27
TROAP-211ENST00000549891 ZNF280CQ8ND82 737 aa16.71■□□□□ 0.27
TROAP-211ENST00000549891 ZNF384Q8TF68 577 aa16.71■□□□□ 0.27
TROAP-211ENST00000549891 LRP2BPQ9P2M1 347 aa16.71■□□□□ 0.27
TROAP-211ENST00000549891 HERC5Q9UII4 1024 aaKnown RBP16.71■□□□□ 0.27
TROAP-211ENST00000549891 MAST2Q6P0Q8 1798 aa16.71■□□□□ 0.27
TROAP-211ENST00000549891 SLURP2P0DP57 97 aa16.7■□□□□ 0.26
TROAP-211ENST00000549891 TRIM27P14373 513 aa16.7■□□□□ 0.26
TROAP-211ENST00000549891 ELNP15502 786 aa16.7■□□□□ 0.26
TROAP-211ENST00000549891 SPP2Q13103 211 aa16.7■□□□□ 0.26
TROAP-211ENST00000549891 PI16Q6UXB8 463 aa16.7■□□□□ 0.26
TROAP-211ENST00000549891 ATF7IPQ6VMQ6 1270 aa16.7■□□□□ 0.26
TROAP-211ENST00000549891 TBC1D9Q6ZT07 1266 aa16.7■□□□□ 0.26
TROAP-211ENST00000549891 TEX11Q8IYF3 940 aa16.7■□□□□ 0.26
TROAP-211ENST00000549891 DHX36Q9H2U1 1008 aaKnown RBP16.7■□□□□ 0.26
TROAP-211ENST00000549891 AS3MTQ9HBK9 375 aa16.7■□□□□ 0.26
TROAP-211ENST00000549891 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.7■□□□□ 0.26
TROAP-211ENST00000549891 FOCADQ5VW36 1801 aa16.7■□□□□ 0.26
TROAP-211ENST00000549891 CDK5RAP2Q96SN8 1893 aa16.69■□□□□ 0.26
TROAP-211ENST00000549891 FAM196BA6NMK8 535 aa16.69■□□□□ 0.26
TROAP-211ENST00000549891 USP17L5A8MUK1 530 aa16.69■□□□□ 0.26
TROAP-211ENST00000549891 CCER2I3L3R5 266 aa16.69■□□□□ 0.26
TROAP-211ENST00000549891 BAG3O95817 575 aa16.69■□□□□ 0.26
TROAP-211ENST00000549891 TFRCP02786 760 aaKnown RBP16.69■□□□□ 0.26
TROAP-211ENST00000549891 PLCG2P16885 1265 aa16.69■□□□□ 0.26
TROAP-211ENST00000549891 CAP2P40123 477 aa16.69■□□□□ 0.26
TROAP-211ENST00000549891 TREML2Q5T2D2 321 aa16.69■□□□□ 0.26
TROAP-211ENST00000549891 CCDC84Q86UT8 332 aaPredicted RBP16.69■□□□□ 0.26
TROAP-211ENST00000549891 FRAT1Q92837 279 aaPredicted RBP16.69■□□□□ 0.26
TROAP-211ENST00000549891 PI4KBQ9UBF8 816 aa16.69■□□□□ 0.26
TROAP-211ENST00000549891 TAOK2Q9UL54 1235 aa16.69■□□□□ 0.26
TROAP-211ENST00000549891 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.69■□□□□ 0.26
TROAP-211ENST00000549891 MCAMP43121 646 aa16.68■□□□□ 0.26
TROAP-211ENST00000549891 HMGCS2P54868 508 aa16.68■□□□□ 0.26
TROAP-211ENST00000549891 DEFB118Q96PH6 123 aa16.68■□□□□ 0.26
TROAP-211ENST00000549891 PNMA6EA0A0J9YXQ4 647 aa16.67■□□□□ 0.26
TROAP-211ENST00000549891 EVI5O60447 810 aa16.67■□□□□ 0.26
TROAP-211ENST00000549891 IGSF3O75054 1194 aa16.67■□□□□ 0.26
TROAP-211ENST00000549891 SH3D19Q5HYK7 790 aa16.67■□□□□ 0.26
TROAP-211ENST00000549891 CCDC158Q5M9N0 1113 aa16.67■□□□□ 0.26
TROAP-211ENST00000549891 TTC39AQ5SRH9 613 aa16.67■□□□□ 0.26
TROAP-211ENST00000549891 NAA16Q6N069 864 aaPredicted RBP16.67■□□□□ 0.26
TROAP-211ENST00000549891 TRIM34Q9BYJ4 488 aa16.67■□□□□ 0.26
TROAP-211ENST00000549891 GPR108Q9NPR9 543 aa16.67■□□□□ 0.26
TROAP-211ENST00000549891 PAK6Q9NQU5 681 aaPredicted RBP16.67■□□□□ 0.26
TROAP-211ENST00000549891 RBM27Q9P2N5 1060 aaKnown RBP16.67■□□□□ 0.26
TROAP-211ENST00000549891 ASNSP08243 561 aa16.66■□□□□ 0.26
TROAP-211ENST00000549891 SH3RF3Q8TEJ3 882 aaPredicted RBP16.66■□□□□ 0.26
TROAP-211ENST00000549891 ASCC2Q9H1I8 757 aaPredicted RBP16.66■□□□□ 0.26
TROAP-211ENST00000549891 MYO5AQ9Y4I1 1855 aaKnown RBP16.66■□□□□ 0.26
TROAP-211ENST00000549891 SIPA1L1O43166 1804 aa16.66■□□□□ 0.26
TROAP-211ENST00000549891 ZBTB7BO15156 539 aaPredicted RBP16.65■□□□□ 0.26
TROAP-211ENST00000549891 HMGCRP04035 888 aa16.65■□□□□ 0.26
TROAP-211ENST00000549891 OS9Q13438 667 aaPredicted RBP16.65■□□□□ 0.26
TROAP-211ENST00000549891 CLUAP1Q96AJ1 413 aa16.65■□□□□ 0.26
TROAP-211ENST00000549891 WDR18Q9BV38 432 aa16.65■□□□□ 0.26
TROAP-211ENST00000549891 GINM1Q9NU53 330 aa16.65■□□□□ 0.26
TROAP-211ENST00000549891 AATFQ9NY61 560 aaKnown RBP eCLIP16.65■□□□□ 0.26
TROAP-211ENST00000549891 TMOD4Q9NZQ9 345 aa16.65■□□□□ 0.26
TROAP-211ENST00000549891 RANBP2P49792 3224 aaKnown RBP16.64■□□□□ 0.25
TROAP-211ENST00000549891 A0A1W2PPC1 479 aa16.64■□□□□ 0.25
TROAP-211ENST00000549891 C19orf81C9J6K1 198 aa16.64■□□□□ 0.25
TROAP-211ENST00000549891 BCAR3O75815 825 aa16.64■□□□□ 0.25
TROAP-211ENST00000549891 PPP4CP60510 307 aa16.64■□□□□ 0.25
TROAP-211ENST00000549891 IRX3P78415 501 aaPredicted RBP16.64■□□□□ 0.25
TROAP-211ENST00000549891 TNNI3KQ59H18 835 aa16.64■□□□□ 0.25
TROAP-211ENST00000549891 NECAB2Q7Z6G3 386 aa16.64■□□□□ 0.25
TROAP-211ENST00000549891 FOXP4Q8IVH2 680 aaPredicted RBP16.64■□□□□ 0.25
TROAP-211ENST00000549891 CRACR2BQ8N4Y2 399 aaPredicted RBP16.64■□□□□ 0.25
TROAP-211ENST00000549891 ANKLE1Q8NAG6 615 aa16.64■□□□□ 0.25
TROAP-211ENST00000549891 CRISPLD2Q9H0B8 497 aa16.64■□□□□ 0.25
TROAP-211ENST00000549891 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.64■□□□□ 0.25
TROAP-211ENST00000549891 FPGT-TNNI3KV9GXZ4 949 aa16.64■□□□□ 0.25
TROAP-211ENST00000549891 SZT2Q5T011 3432 aa16.63■□□□□ 0.25
TROAP-211ENST00000549891 MYH1P12882 1939 aa16.63■□□□□ 0.25
TROAP-211ENST00000549891 ALPK3Q96L96 1907 aa16.63■□□□□ 0.25
TROAP-211ENST00000549891 BACE1P56817 501 aa16.63■□□□□ 0.25
TROAP-211ENST00000549891 MTMR2Q13614 643 aa16.63■□□□□ 0.25
TROAP-211ENST00000549891 ZKSCAN2Q63HK3 967 aa16.63■□□□□ 0.25
TROAP-211ENST00000549891 TGFBRAP1Q8WUH2 860 aa16.63■□□□□ 0.25
TROAP-211ENST00000549891 ZNF512BQ96KM6 892 aaPredicted RBP16.63■□□□□ 0.25
TROAP-211ENST00000549891 SNRKQ9NRH2 765 aa16.63■□□□□ 0.25
TROAP-211ENST00000549891 MORF4L1Q9UBU8 362 aa16.63■□□□□ 0.25
TROAP-211ENST00000549891 RPTORQ8N122 1335 aa16.63■□□□□ 0.25
TROAP-211ENST00000549891 PLXNB2O15031 1838 aa16.63■□□□□ 0.25
TROAP-211ENST00000549891 HLA-DOAP06340 250 aa16.62■□□□□ 0.25
TROAP-211ENST00000549891 HOXA7P31268 230 aaPredicted RBP16.62■□□□□ 0.25
TROAP-211ENST00000549891 POLA2Q14181 598 aa16.62■□□□□ 0.25
TROAP-211ENST00000549891 RRP1BQ14684 758 aaKnown RBP16.62■□□□□ 0.25
TROAP-211ENST00000549891 METTL16Q86W50 562 aaKnown RBP16.62■□□□□ 0.25
TROAP-211ENST00000549891 MAPKAPK5Q8IW41 473 aa16.62■□□□□ 0.25
TROAP-211ENST00000549891 SSH3Q8TE77 659 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms