RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 ZNF654Q8IZM8 581 aa21.45■■□□□ 1.02
PRPF40B-208ENST00000548436 DUOX1Q9NRD9 1551 aa21.45■■□□□ 1.02
PRPF40B-208ENST00000548436 CYP2D7A0A087X1C5 515 aa21.44■■□□□ 1.02
PRPF40B-208ENST00000548436 ZPR1O75312 459 aa21.44■■□□□ 1.02
PRPF40B-208ENST00000548436 SEC23AQ15436 765 aa21.44■■□□□ 1.02
PRPF40B-208ENST00000548436 CCDC82Q8N4S0 544 aa21.44■■□□□ 1.02
PRPF40B-208ENST00000548436 UBAC1Q9BSL1 405 aa21.44■■□□□ 1.02
PRPF40B-208ENST00000548436 BECN2A8MW95 431 aa21.44■■□□□ 1.02
PRPF40B-208ENST00000548436 CEP57L1Q8IYX8 460 aa21.44■■□□□ 1.02
PRPF40B-208ENST00000548436 FNBP4Q8N3X1 1017 aaPredicted RBP21.44■■□□□ 1.02
PRPF40B-208ENST00000548436 CRACR2BQ8N4Y2 399 aaPredicted RBP21.44■■□□□ 1.02
PRPF40B-208ENST00000548436 WASF1Q92558 559 aa21.44■■□□□ 1.02
PRPF40B-208ENST00000548436 TNKSO95271 1327 aa21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 MMP1P03956 469 aa21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 CDC25BP30305 580 aa21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 DNTTIP2Q5QJE6 756 aaKnown RBP21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 SHC4Q6S5L8 630 aa21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 FANCBQ8NB91 859 aa21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 NUP133Q8WUM0 1156 aa21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 ESR2Q92731 530 aa21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 TFCP2L1Q9NZI6 479 aa21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 CLIP2Q9UDT6 1046 aa21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 KCNJ14Q9UNX9 436 aa21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 CCDC88AQ3V6T2 1871 aa21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 BTBD18B2RXH4 712 aa21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 SLC3A2P08195 630 aaKnown RBP21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 RCAN1P53805 252 aa21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 TRIM22Q8IYM9 498 aa21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 AOPEPQ8N6M6 819 aa21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 NSUN4Q96CB9 384 aaKnown RBP21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 BRIP1Q9BX63 1249 aa21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 CCNL1Q9UK58 526 aaPredicted RBP21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 HPSEQ9Y251 543 aa21.43■■□□□ 1.02
PRPF40B-208ENST00000548436 THSD7AQ9UPZ6 1657 aa21.42■■□□□ 1.02
PRPF40B-208ENST00000548436 SEMA3EO15041 775 aa21.42■■□□□ 1.02
PRPF40B-208ENST00000548436 LRMPQ12912 555 aa21.42■■□□□ 1.02
PRPF40B-208ENST00000548436 DPCR1Q3MIW9 517 aa21.42■■□□□ 1.02
PRPF40B-208ENST00000548436 NOSTRINQ8IVI9 506 aa21.42■■□□□ 1.02
PRPF40B-208ENST00000548436 ARHGEF1Q92888 912 aaKnown RBP21.42■■□□□ 1.02
PRPF40B-208ENST00000548436 CLIC6Q96NY7 704 aa21.42■■□□□ 1.02
PRPF40B-208ENST00000548436 DLEC1Q9Y238 1755 aa21.42■■□□□ 1.02
PRPF40B-208ENST00000548436 CCDC196A0A1B0GTZ2 297 aa21.41■■□□□ 1.02
PRPF40B-208ENST00000548436 TM4SF1P30408 202 aa21.41■■□□□ 1.02
PRPF40B-208ENST00000548436 MECOMQ03112 1051 aa21.41■■□□□ 1.02
PRPF40B-208ENST00000548436 CCDC144BQ3MJ40 725 aa21.41■■□□□ 1.02
PRPF40B-208ENST00000548436 TPTE2Q6XPS3 522 aa21.41■■□□□ 1.02
PRPF40B-208ENST00000548436 JMYQ8N9B5 988 aa21.41■■□□□ 1.02
PRPF40B-208ENST00000548436 NAT10Q9H0A0 1025 aaKnown RBP21.41■■□□□ 1.02
PRPF40B-208ENST00000548436 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.41■■□□□ 1.02
PRPF40B-208ENST00000548436 RTCBQ9Y3I0 505 aaKnown RBP21.41■■□□□ 1.02
PRPF40B-208ENST00000548436 LY75O60449 1722 aa21.41■■□□□ 1.02
PRPF40B-208ENST00000548436 UQCRHLA0A096LP55 91 aa21.41■■□□□ 1.02
PRPF40B-208ENST00000548436 DEXIO95424 95 aa21.41■■□□□ 1.02
PRPF40B-208ENST00000548436 UQCRHP07919 91 aa21.41■■□□□ 1.02
PRPF40B-208ENST00000548436 HIBADHP31937 336 aaKnown RBP21.41■■□□□ 1.02
PRPF40B-208ENST00000548436 DIS3L2Q8IYB7 885 aaKnown RBP21.41■■□□□ 1.02
PRPF40B-208ENST00000548436 ENAHQ8N8S7 591 aaPredicted RBP21.41■■□□□ 1.02
PRPF40B-208ENST00000548436 MRFAP1L1Q96HT8 127 aa21.41■■□□□ 1.02
PRPF40B-208ENST00000548436 TNRC6CQ9HCJ0 1690 aaKnown RBP21.41■■□□□ 1.02
PRPF40B-208ENST00000548436 SYKP43405 635 aa21.4■■□□□ 1.02
PRPF40B-208ENST00000548436 TOB1P50616 345 aaPredicted RBP21.4■■□□□ 1.02
PRPF40B-208ENST00000548436 CTR9Q6PD62 1173 aa21.4■■□□□ 1.02
PRPF40B-208ENST00000548436 ANKRD2Q9GZV1 360 aa21.4■■□□□ 1.02
PRPF40B-208ENST00000548436 FAM237AA0A1B0GTK4 181 aa21.4■■□□□ 1.02
PRPF40B-208ENST00000548436 BIN1O00499 593 aa21.4■■□□□ 1.02
PRPF40B-208ENST00000548436 EVX2Q03828 476 aa21.4■■□□□ 1.02
PRPF40B-208ENST00000548436 RESP18Q5W5W9 173 aa21.4■■□□□ 1.02
PRPF40B-208ENST00000548436 TIGD1Q96MW7 591 aa21.4■■□□□ 1.02
PRPF40B-208ENST00000548436 ZSCAN10Q96SZ4 725 aaPredicted RBP21.4■■□□□ 1.02
PRPF40B-208ENST00000548436 USP21Q9UK80 565 aa21.4■■□□□ 1.02
PRPF40B-208ENST00000548436 LAMB1P07942 1786 aa21.39■■□□□ 1.02
PRPF40B-208ENST00000548436 PDS5AQ29RF7 1337 aaKnown RBP21.39■■□□□ 1.02
PRPF40B-208ENST00000548436 PRDM1O75626 825 aa21.39■■□□□ 1.01
PRPF40B-208ENST00000548436 FGRP09769 529 aa21.39■■□□□ 1.01
PRPF40B-208ENST00000548436 RBM6P78332 1123 aaKnown RBP21.39■■□□□ 1.01
PRPF40B-208ENST00000548436 SAFBQ15424 915 aaKnown RBP eCLIP21.39■■□□□ 1.01
PRPF40B-208ENST00000548436 TXNRD3Q86VQ6 643 aa21.39■■□□□ 1.01
PRPF40B-208ENST00000548436 SBF2Q86WG5 1849 aa21.39■■□□□ 1.01
PRPF40B-208ENST00000548436 USP17L12C9JPN9 530 aa21.38■■□□□ 1.01
PRPF40B-208ENST00000548436 USP17L21D6R901 530 aa21.38■■□□□ 1.01
PRPF40B-208ENST00000548436 PRDX5P30044 214 aa21.38■■□□□ 1.01
PRPF40B-208ENST00000548436 NLRP12P59046 1061 aa21.38■■□□□ 1.01
PRPF40B-208ENST00000548436 BPIFA3Q9BQP9 254 aa21.38■■□□□ 1.01
PRPF40B-208ENST00000548436 FOXP1Q9H334 677 aaPredicted RBP21.38■■□□□ 1.01
PRPF40B-208ENST00000548436 MAST2Q6P0Q8 1798 aa21.38■■□□□ 1.01
PRPF40B-208ENST00000548436 CUTAO60888 179 aa21.38■■□□□ 1.01
PRPF40B-208ENST00000548436 CHAF1AQ13111 956 aaPredicted RBP21.38■■□□□ 1.01
PRPF40B-208ENST00000548436 NR5A1Q13285 461 aa21.38■■□□□ 1.01
PRPF40B-208ENST00000548436 ZRSR1Q15695 479 aaKnown RBP21.38■■□□□ 1.01
PRPF40B-208ENST00000548436 MEX3CQ5U5Q3 659 aaKnown RBP21.38■■□□□ 1.01
PRPF40B-208ENST00000548436 CACTINQ8WUQ7 758 aaKnown RBP21.38■■□□□ 1.01
PRPF40B-208ENST00000548436 AATFQ9NY61 560 aaKnown RBP eCLIP21.38■■□□□ 1.01
PRPF40B-208ENST00000548436 SHISA4Q96DD7 197 aa21.37■■□□□ 1.01
PRPF40B-208ENST00000548436 IRS2Q9Y4H2 1338 aa21.37■■□□□ 1.01
PRPF40B-208ENST00000548436 SLC51AQ86UW1 340 aa21.36■■□□□ 1.01
PRPF40B-208ENST00000548436 OXER1Q8TDS5 423 aa21.36■■□□□ 1.01
PRPF40B-208ENST00000548436 KIAA1551Q9HCM1 1747 aa21.36■■□□□ 1.01
PRPF40B-208ENST00000548436 IFIT1BQ5T764 474 aaKnown RBP21.36■■□□□ 1.01
PRPF40B-208ENST00000548436 RNF26Q9BY78 433 aaPredicted RBP21.36■■□□□ 1.01
PRPF40B-208ENST00000548436 DCP1AQ9NPI6 582 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms