RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 CAP1Q01518 475 aa22.71■■□□□ 1.23
CHMP1A-203ENST00000547614 TTF1Q15361 905 aaPredicted RBP22.71■■□□□ 1.23
CHMP1A-203ENST00000547614 GPAT2Q6NUI2 795 aa22.71■■□□□ 1.23
CHMP1A-203ENST00000547614 FOXP4Q8IVH2 680 aaPredicted RBP22.71■■□□□ 1.23
CHMP1A-203ENST00000547614 FLT1P17948 1338 aa22.71■■□□□ 1.23
CHMP1A-203ENST00000547614 DOCK1Q14185 1865 aa22.71■■□□□ 1.23
CHMP1A-203ENST00000547614 FAM196BA6NMK8 535 aa22.7■■□□□ 1.22
CHMP1A-203ENST00000547614 CAP2P40123 477 aa22.7■■□□□ 1.22
CHMP1A-203ENST00000547614 LACTBP83111 547 aaPredicted RBP22.7■■□□□ 1.22
CHMP1A-203ENST00000547614 KIF22Q14807 665 aa22.7■■□□□ 1.22
CHMP1A-203ENST00000547614 METTL16Q86W50 562 aaKnown RBP22.7■■□□□ 1.22
CHMP1A-203ENST00000547614 MAPKAPK5Q8IW41 473 aa22.7■■□□□ 1.22
CHMP1A-203ENST00000547614 MAGEB6Q8N7X4 407 aa22.7■■□□□ 1.22
CHMP1A-203ENST00000547614 TBC1D2Q9BYX2 928 aa22.7■■□□□ 1.22
CHMP1A-203ENST00000547614 NDUFB9Q9Y6M9 179 aa22.7■■□□□ 1.22
CHMP1A-203ENST00000547614 GNRH1P01148 92 aa22.69■■□□□ 1.22
CHMP1A-203ENST00000547614 DYNLL1P63167 89 aaKnown RBP22.69■■□□□ 1.22
CHMP1A-203ENST00000547614 PARK7Q99497 189 aaKnown RBP22.69■■□□□ 1.22
CHMP1A-203ENST00000547614 SLC45A1Q9Y2W3 748 aa22.69■■□□□ 1.22
CHMP1A-203ENST00000547614 ADGRA2Q96PE1 1338 aa22.68■■□□□ 1.22
CHMP1A-203ENST00000547614 FOCADQ5VW36 1801 aa22.67■■□□□ 1.22
CHMP1A-203ENST00000547614 TRIM75PA6NK02 468 aa22.67■■□□□ 1.22
CHMP1A-203ENST00000547614 MIGA1Q8NAN2 632 aa22.67■■□□□ 1.22
CHMP1A-203ENST00000547614 CPA4Q9UI42 421 aa22.67■■□□□ 1.22
CHMP1A-203ENST00000547614 PALD1Q9ULE6 856 aa22.67■■□□□ 1.22
CHMP1A-203ENST00000547614 CDK5RAP2Q96SN8 1893 aa22.66■■□□□ 1.22
CHMP1A-203ENST00000547614 PHIPQ8WWQ0 1821 aa22.66■■□□□ 1.22
CHMP1A-203ENST00000547614 HTTP42858 3142 aa22.66■■□□□ 1.22
CHMP1A-203ENST00000547614 GADL1Q6ZQY3 521 aa22.66■■□□□ 1.22
CHMP1A-203ENST00000547614 ARMC5Q96C12 935 aa22.66■■□□□ 1.22
CHMP1A-203ENST00000547614 GINM1Q9NU53 330 aa22.66■■□□□ 1.22
CHMP1A-203ENST00000547614 USP17L5A8MUK1 530 aa22.65■■□□□ 1.22
CHMP1A-203ENST00000547614 HLA-DOAP06340 250 aa22.65■■□□□ 1.22
CHMP1A-203ENST00000547614 PRMT2P55345 433 aa22.65■■□□□ 1.22
CHMP1A-203ENST00000547614 RRP1BQ14684 758 aaKnown RBP22.65■■□□□ 1.22
CHMP1A-203ENST00000547614 CRACR2BQ8N4Y2 399 aaPredicted RBP22.65■■□□□ 1.22
CHMP1A-203ENST00000547614 ZNF280CQ8ND82 737 aa22.65■■□□□ 1.22
CHMP1A-203ENST00000547614 LRRCC1Q9C099 1032 aa22.65■■□□□ 1.22
CHMP1A-203ENST00000547614 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.65■■□□□ 1.22
CHMP1A-203ENST00000547614 PTPRFP10586 1907 aa22.65■■□□□ 1.22
CHMP1A-203ENST00000547614 ASNSP08243 561 aa22.64■■□□□ 1.21
CHMP1A-203ENST00000547614 CYP2C8P10632 490 aa22.64■■□□□ 1.21
CHMP1A-203ENST00000547614 BCRP11274 1271 aa22.64■■□□□ 1.21
CHMP1A-203ENST00000547614 ATP5JP18859 108 aa22.64■■□□□ 1.21
CHMP1A-203ENST00000547614 USP5P45974 858 aa22.64■■□□□ 1.21
CHMP1A-203ENST00000547614 SPP2Q13103 211 aa22.64■■□□□ 1.21
CHMP1A-203ENST00000547614 SLC9C2Q5TAH2 1124 aa22.64■■□□□ 1.21
CHMP1A-203ENST00000547614 CCDC84Q86UT8 332 aaPredicted RBP22.64■■□□□ 1.21
CHMP1A-203ENST00000547614 PROCA1Q8NCQ7 364 aaPredicted RBP22.64■■□□□ 1.21
CHMP1A-203ENST00000547614 TRIM34Q9BYJ4 488 aa22.64■■□□□ 1.21
CHMP1A-203ENST00000547614 ARHGAP39Q9C0H5 1083 aa22.64■■□□□ 1.21
CHMP1A-203ENST00000547614 DNAJC18Q9H819 358 aa22.64■■□□□ 1.21
CHMP1A-203ENST00000547614 AS3MTQ9HBK9 375 aa22.64■■□□□ 1.21
CHMP1A-203ENST00000547614 AGTPBP1Q9UPW5 1226 aa22.64■■□□□ 1.21
CHMP1A-203ENST00000547614 GOLIM4O00461 696 aa22.63■■□□□ 1.21
CHMP1A-203ENST00000547614 PDE6AP16499 860 aa22.63■■□□□ 1.21
CHMP1A-203ENST00000547614 NBPF11Q86T75 865 aa22.63■■□□□ 1.21
CHMP1A-203ENST00000547614 DNAJC2Q99543 621 aaKnown RBP22.63■■□□□ 1.21
CHMP1A-203ENST00000547614 RIOK1Q9BRS2 568 aaKnown RBP22.63■■□□□ 1.21
CHMP1A-203ENST00000547614 WDR18Q9BV38 432 aa22.63■■□□□ 1.21
CHMP1A-203ENST00000547614 SAP30BPQ9UHR5 308 aaKnown RBP22.63■■□□□ 1.21
CHMP1A-203ENST00000547614 SIPA1L1O43166 1804 aa22.63■■□□□ 1.21
CHMP1A-203ENST00000547614 PSMC4P43686 418 aa22.62■■□□□ 1.21
CHMP1A-203ENST00000547614 BCL11AQ9H165 835 aa22.62■■□□□ 1.21
CHMP1A-203ENST00000547614 PTCH2Q9Y6C5 1203 aa22.62■■□□□ 1.21
CHMP1A-203ENST00000547614 MAGEB6P1A0A0J9YX57 407 aa22.61■■□□□ 1.21
CHMP1A-203ENST00000547614 HOXD10P28358 340 aa22.61■■□□□ 1.21
CHMP1A-203ENST00000547614 SLC9C1Q4G0N8 1177 aa22.61■■□□□ 1.21
CHMP1A-203ENST00000547614 SH3D19Q5HYK7 790 aa22.61■■□□□ 1.21
CHMP1A-203ENST00000547614 TTC6Q86TZ1 520 aa22.61■■□□□ 1.21
CHMP1A-203ENST00000547614 TRIM47Q96LD4 638 aa22.61■■□□□ 1.21
CHMP1A-203ENST00000547614 EHD4Q9H223 541 aa22.61■■□□□ 1.21
CHMP1A-203ENST00000547614 DCTPP1Q9H773 170 aa22.61■■□□□ 1.21
CHMP1A-203ENST00000547614 PAG1Q9NWQ8 432 aa22.61■■□□□ 1.21
CHMP1A-203ENST00000547614 ATAD5Q96QE3 1844 aa22.61■■□□□ 1.21
CHMP1A-203ENST00000547614 HAUS7Q99871 368 aa22.6■■□□□ 1.21
CHMP1A-203ENST00000547614 BOLA2Q9H3K6 86 aa22.6■■□□□ 1.21
CHMP1A-203ENST00000547614 SRRDQ9UH36 339 aa22.6■■□□□ 1.21
CHMP1A-203ENST00000547614 SERPINB13Q9UIV8 391 aa22.6■■□□□ 1.21
CHMP1A-203ENST00000547614 PNMA3Q9UL41 463 aa22.6■■□□□ 1.21
CHMP1A-203ENST00000547614 ZNF532Q9HCE3 1301 aa22.59■■□□□ 1.21
CHMP1A-203ENST00000547614 TCRBV5S4A2TA0A5A2 114 aa22.59■■□□□ 1.21
CHMP1A-203ENST00000547614 CTGFP29279 349 aa22.59■■□□□ 1.21
CHMP1A-203ENST00000547614 PABPC4Q13310 644 aaKnown RBP eCLIP22.59■■□□□ 1.21
CHMP1A-203ENST00000547614 SMCR8Q8TEV9 937 aaPredicted RBP22.59■■□□□ 1.21
CHMP1A-203ENST00000547614 ZNF333Q96JL9 665 aa22.59■■□□□ 1.21
CHMP1A-203ENST00000547614 CRNKL1Q9BZJ0 848 aaKnown RBP22.59■■□□□ 1.21
CHMP1A-203ENST00000547614 MYH1P12882 1939 aa22.59■■□□□ 1.21
CHMP1A-203ENST00000547614 FMNL1O95466 1100 aaPredicted RBP22.58■■□□□ 1.21
CHMP1A-203ENST00000547614 HMGCS2P54868 508 aa22.58■■□□□ 1.21
CHMP1A-203ENST00000547614 BACE1P56817 501 aa22.58■■□□□ 1.21
CHMP1A-203ENST00000547614 JAG1P78504 1218 aa22.58■■□□□ 1.21
CHMP1A-203ENST00000547614 TREML2Q5T2D2 321 aa22.58■■□□□ 1.21
CHMP1A-203ENST00000547614 TATDN1Q6P1N9 297 aa22.58■■□□□ 1.21
CHMP1A-203ENST00000547614 EDC3Q96F86 508 aaKnown RBP22.58■■□□□ 1.21
CHMP1A-203ENST00000547614 ZBTB21Q9ULJ3 1066 aa22.58■■□□□ 1.21
CHMP1A-203ENST00000547614 CENPFP49454 3210 aa22.58■■□□□ 1.2
CHMP1A-203ENST00000547614 C19orf81C9J6K1 198 aa22.57■■□□□ 1.2
CHMP1A-203ENST00000547614 OSBPP22059 807 aa22.57■■□□□ 1.2
CHMP1A-203ENST00000547614 FCGRTP55899 365 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms