RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 PRDM10Q9NQV6 1147 aa8.68□□□□□ -1.02
SNHG1-224ENST00000545688 PCDHB5Q9Y5E4 795 aa8.68□□□□□ -1.02
SNHG1-224ENST00000545688 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.67□□□□□ -1.02
SNHG1-224ENST00000545688 CEACAM5P06731 702 aa8.67□□□□□ -1.02
SNHG1-224ENST00000545688 OXCT1P55809 520 aa8.67□□□□□ -1.02
SNHG1-224ENST00000545688 RPS26P62854 115 aaKnown RBP8.67□□□□□ -1.02
SNHG1-224ENST00000545688 SEPT6Q14141 434 aa8.67□□□□□ -1.02
SNHG1-224ENST00000545688 WIPI1Q5MNZ9 446 aaPredicted RBP8.67□□□□□ -1.02
SNHG1-224ENST00000545688 HDXQ7Z353 690 aa8.67□□□□□ -1.02
SNHG1-224ENST00000545688 STK11IPQ8N1F8 1099 aa8.67□□□□□ -1.02
SNHG1-224ENST00000545688 AGBL5Q8NDL9 886 aa8.67□□□□□ -1.02
SNHG1-224ENST00000545688 FAM161BQ96MY7 647 aa8.67□□□□□ -1.02
SNHG1-224ENST00000545688 LIG3P49916 1009 aa8.66□□□□□ -1.02
SNHG1-224ENST00000545688 CBLL1Q75N03 491 aa8.66□□□□□ -1.02
SNHG1-224ENST00000545688 ARMCX6Q7L4S7 300 aa8.66□□□□□ -1.02
SNHG1-224ENST00000545688 FAM214BQ7L5A3 538 aa8.66□□□□□ -1.02
SNHG1-224ENST00000545688 KCT2Q8NC54 265 aa8.66□□□□□ -1.02
SNHG1-224ENST00000545688 ZNF507Q8TCN5 953 aa8.66□□□□□ -1.02
SNHG1-224ENST00000545688 MISP3Q96FF7 219 aa8.66□□□□□ -1.02
SNHG1-224ENST00000545688 FBRSQ9HAH7 460 aa8.66□□□□□ -1.02
SNHG1-224ENST00000545688 MKNK2Q9HBH9 465 aa8.66□□□□□ -1.02
SNHG1-224ENST00000545688 PLAGL2Q9UPG8 496 aa8.66□□□□□ -1.02
SNHG1-224ENST00000545688 PAX4O43316 350 aa8.65□□□□□ -1.02
SNHG1-224ENST00000545688 CTSHP09668 335 aa8.65□□□□□ -1.02
SNHG1-224ENST00000545688 ITIH2P19823 946 aa8.65□□□□□ -1.02
SNHG1-224ENST00000545688 LMNB1P20700 586 aa8.65□□□□□ -1.02
SNHG1-224ENST00000545688 XPCQ01831 940 aaPredicted RBP8.65□□□□□ -1.02
SNHG1-224ENST00000545688 IFI16Q16666 785 aaKnown RBP8.65□□□□□ -1.02
SNHG1-224ENST00000545688 AGMOQ6ZNB7 445 aa8.65□□□□□ -1.02
SNHG1-224ENST00000545688 GZF1Q9H116 711 aaPredicted RBP8.65□□□□□ -1.02
SNHG1-224ENST00000545688 SNCAIPQ9Y6H5 919 aa8.65□□□□□ -1.02
SNHG1-224ENST00000545688 KRTAP9-6A0A140TA67 174 aa8.64□□□□□ -1.03
SNHG1-224ENST00000545688 CD96P40200 585 aa8.64□□□□□ -1.03
SNHG1-224ENST00000545688 TAGLNQ01995 201 aaKnown RBP8.64□□□□□ -1.03
SNHG1-224ENST00000545688 TMC4Q7Z404 712 aa8.64□□□□□ -1.03
SNHG1-224ENST00000545688 WNT10AQ9GZT5 417 aa8.64□□□□□ -1.03
SNHG1-224ENST00000545688 LRIG2O94898 1065 aa8.63□□□□□ -1.03
SNHG1-224ENST00000545688 EOMESO95936 686 aa8.63□□□□□ -1.03
SNHG1-224ENST00000545688 CD8BP10966 210 aa8.63□□□□□ -1.03
SNHG1-224ENST00000545688 TFE3P19532 575 aaPredicted RBP8.63□□□□□ -1.03
SNHG1-224ENST00000545688 ETF1P62495 437 aaKnown RBP8.63□□□□□ -1.03
SNHG1-224ENST00000545688 PRKCQQ04759 706 aa8.63□□□□□ -1.03
SNHG1-224ENST00000545688 SLBPQ14493 270 aaKnown RBP eCLIP8.63□□□□□ -1.032e-8■□□□□ 9.6
SNHG1-224ENST00000545688 PLCL1Q15111 1095 aa8.63□□□□□ -1.03
SNHG1-224ENST00000545688 NKG7Q16617 165 aa8.63□□□□□ -1.03
SNHG1-224ENST00000545688 CCDC27Q2M243 656 aa8.63□□□□□ -1.03
SNHG1-224ENST00000545688 GTF2IRD1Q9UHL9 959 aa8.63□□□□□ -1.03
SNHG1-224ENST00000545688 VAV3Q9UKW4 847 aa8.63□□□□□ -1.03
SNHG1-224ENST00000545688 IGF2BP3O00425 579 aaKnown RBP eCLIP8.62□□□□□ -1.03
SNHG1-224ENST00000545688 TAF1CQ15572 869 aaPredicted RBP8.62□□□□□ -1.03
SNHG1-224ENST00000545688 AOC3Q16853 763 aa8.62□□□□□ -1.03
SNHG1-224ENST00000545688 HRASLS5Q96KN8 279 aa8.62□□□□□ -1.03
SNHG1-224ENST00000545688 TNKS2Q9H2K2 1166 aa8.62□□□□□ -1.03
SNHG1-224ENST00000545688 TMEM265A0A087WTH1 108 aa8.61□□□□□ -1.03
SNHG1-224ENST00000545688 GRK4P32298 578 aa8.61□□□□□ -1.03
SNHG1-224ENST00000545688 ST13P50502 369 aaKnown RBP8.61□□□□□ -1.03
SNHG1-224ENST00000545688 NOC4LQ9BVI4 516 aaKnown RBP8.61□□□□□ -1.03
SNHG1-224ENST00000545688 FOXQ1Q9C009 403 aa8.61□□□□□ -1.03
SNHG1-224ENST00000545688 MIR1-1HGQ9H1L0 117 aa8.61□□□□□ -1.03
SNHG1-224ENST00000545688 TLR6Q9Y2C9 796 aa8.61□□□□□ -1.03
SNHG1-224ENST00000545688 USP31Q70CQ4 1352 aa8.61□□□□□ -1.03
SNHG1-224ENST00000545688 GFRA2O00451 464 aa8.6□□□□□ -1.03
SNHG1-224ENST00000545688 SLITRK5O94991 958 aa8.6□□□□□ -1.03
SNHG1-224ENST00000545688 FUT4P22083 530 aa8.6□□□□□ -1.03
SNHG1-224ENST00000545688 CAP2P40123 477 aa8.6□□□□□ -1.03
SNHG1-224ENST00000545688 SPACA3Q8IXA5 215 aa8.6□□□□□ -1.03
SNHG1-224ENST00000545688 FMNL2Q96PY5 1086 aa8.6□□□□□ -1.03
SNHG1-224ENST00000545688 PRDM5Q9NQX1 630 aaPredicted RBP8.6□□□□□ -1.03
SNHG1-224ENST00000545688 NKPD1Q17RQ9 610 aa8.59□□□□□ -1.03
SNHG1-224ENST00000545688 ZNF792Q3KQV3 632 aa8.59□□□□□ -1.03
SNHG1-224ENST00000545688 HID1Q8IV36 788 aa8.59□□□□□ -1.03
SNHG1-224ENST00000545688 PHC3Q8NDX5 983 aa8.59□□□□□ -1.03
SNHG1-224ENST00000545688 CRELD1Q96HD1 420 aa8.59□□□□□ -1.03
SNHG1-224ENST00000545688 MIPEPQ99797 713 aa8.59□□□□□ -1.03
SNHG1-224ENST00000545688 KRTAP4-12Q9BQ66 201 aa8.59□□□□□ -1.03
SNHG1-224ENST00000545688 RNF114Q9Y508 228 aa8.59□□□□□ -1.03
SNHG1-224ENST00000545688 GNAT3A8MTJ3 354 aa8.58□□□□□ -1.04
SNHG1-224ENST00000545688 F6X3S4 739 aa8.58□□□□□ -1.04
SNHG1-224ENST00000545688 SORBS3O60504 671 aa8.58□□□□□ -1.04
SNHG1-224ENST00000545688 RLBP1P12271 317 aa8.58□□□□□ -1.04
SNHG1-224ENST00000545688 ITGB5P18084 799 aa8.58□□□□□ -1.04
SNHG1-224ENST00000545688 PRAMEF13Q5VWM6 474 aa8.58□□□□□ -1.04
SNHG1-224ENST00000545688 JARID2Q92833 1246 aaPredicted RBP8.58□□□□□ -1.04
SNHG1-224ENST00000545688 VTI1BQ9UEU0 232 aa8.58□□□□□ -1.04
SNHG1-224ENST00000545688 MAPK8IP1Q9UQF2 711 aa8.58□□□□□ -1.04
SNHG1-224ENST00000545688 SNX11Q9Y5W9 270 aa8.58□□□□□ -1.04
SNHG1-224ENST00000545688 CNTNAP4Q9C0A0 1308 aa8.57□□□□□ -1.04
SNHG1-224ENST00000545688 ERCC3P19447 782 aa8.57□□□□□ -1.04
SNHG1-224ENST00000545688 MFSD2AQ8NA29 543 aa8.57□□□□□ -1.04
SNHG1-224ENST00000545688 XAGE3Q8WTP9 111 aa8.57□□□□□ -1.04
SNHG1-224ENST00000545688 ADAMTS6Q9UKP5 1117 aa8.57□□□□□ -1.04
SNHG1-224ENST00000545688 TACC3Q9Y6A5 838 aa8.57□□□□□ -1.04
SNHG1-224ENST00000545688 PRR33A8MZF0 331 aa8.56□□□□□ -1.04
SNHG1-224ENST00000545688 CST3P01034 146 aaPredicted RBP8.56□□□□□ -1.04
SNHG1-224ENST00000545688 RPL6Q02878 288 aaKnown RBP8.56□□□□□ -1.04
SNHG1-224ENST00000545688 TSNAXIP1Q2TAA8 658 aa8.56□□□□□ -1.04
SNHG1-224ENST00000545688 ANGEL2Q5VTE6 544 aaKnown RBP8.56□□□□□ -1.04
SNHG1-224ENST00000545688 LETMD1Q6P1Q0 360 aa8.56□□□□□ -1.04
SNHG1-224ENST00000545688 RIN3Q8TB24 985 aa8.56□□□□□ -1.04
SNHG1-224ENST00000545688 MRS2Q9HD23 443 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms