RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 CCL15Q16663 113 aa9.01□□□□□ -0.97
LDHA-223ENST00000545215 TTC5Q8N0Z6 440 aa9.01□□□□□ -0.97
LDHA-223ENST00000545215 MRPL50Q8N5N7 158 aaKnown RBP9.01□□□□□ -0.97
LDHA-223ENST00000545215 ZBTB38Q8NAP3 1195 aaPredicted RBP9.01□□□□□ -0.97
LDHA-223ENST00000545215 ZCCHC17Q9NP64 241 aaKnown RBP9.01□□□□□ -0.97
LDHA-223ENST00000545215 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.01□□□□□ -0.97
LDHA-223ENST00000545215 FKBPLQ9UIM3 349 aa9.01□□□□□ -0.97
LDHA-223ENST00000545215 DCHS1Q96JQ0 3298 aa9□□□□□ -0.97
LDHA-223ENST00000545215 DDX60LQ5H9U9 1706 aaKnown RBP9□□□□□ -0.97
LDHA-223ENST00000545215 WNT10BO00744 389 aa9□□□□□ -0.97
LDHA-223ENST00000545215 GFRA3O60609 400 aa9□□□□□ -0.97
LDHA-223ENST00000545215 ELNP15502 786 aa9□□□□□ -0.97
LDHA-223ENST00000545215 LRRC26Q2I0M4 334 aa9□□□□□ -0.97
LDHA-223ENST00000545215 OPTNQ96CV9 577 aa9□□□□□ -0.97
LDHA-223ENST00000545215 GABRQQ9UN88 632 aa9□□□□□ -0.97
LDHA-223ENST00000545215 SCN9AQ15858 1988 aa8.99□□□□□ -0.97
LDHA-223ENST00000545215 PIK3CDO00329 1044 aa8.99□□□□□ -0.97
LDHA-223ENST00000545215 TLL1O43897 1013 aa8.99□□□□□ -0.97
LDHA-223ENST00000545215 EMP3P54852 163 aa8.99□□□□□ -0.97
LDHA-223ENST00000545215 ANKRD13AQ8IZ07 590 aa8.99□□□□□ -0.97
LDHA-223ENST00000545215 THAP11Q96EK4 314 aa8.99□□□□□ -0.97
LDHA-223ENST00000545215 CNTNAP3BQ96NU0 1288 aa8.99□□□□□ -0.97
LDHA-223ENST00000545215 NLRP3Q96P20 1036 aa8.99□□□□□ -0.97
LDHA-223ENST00000545215 CNTNAP3Q9BZ76 1288 aa8.99□□□□□ -0.97
LDHA-223ENST00000545215 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.99□□□□□ -0.97
LDHA-223ENST00000545215 DDX60Q8IY21 1712 aaKnown RBP8.98□□□□□ -0.97
LDHA-223ENST00000545215 CHD6Q8TD26 2715 aa8.98□□□□□ -0.97
LDHA-223ENST00000545215 CFAP47Q6ZTR5 3102 aa8.98□□□□□ -0.97
LDHA-223ENST00000545215 COL6A1P12109 1028 aa8.98□□□□□ -0.97
LDHA-223ENST00000545215 IREB2P48200 963 aaKnown RBP8.98□□□□□ -0.97
LDHA-223ENST00000545215 PIP4K2AP48426 406 aaPredicted RBP8.98□□□□□ -0.97
LDHA-223ENST00000545215 ELOAQ14241 798 aaKnown RBP8.98□□□□□ -0.97
LDHA-223ENST00000545215 PODNQ7Z5L7 613 aa8.98□□□□□ -0.97
LDHA-223ENST00000545215 APOBEC3FQ8IUX4 373 aaKnown RBP8.98□□□□□ -0.97
LDHA-223ENST00000545215 POLLQ9UGP5 575 aa8.98□□□□□ -0.97
LDHA-223ENST00000545215 CPA4Q9UI42 421 aa8.98□□□□□ -0.97
LDHA-223ENST00000545215 OGDHLQ9ULD0 1010 aa8.98□□□□□ -0.97
LDHA-223ENST00000545215 IBTKQ9P2D0 1353 aaPredicted RBP8.98□□□□□ -0.97
LDHA-223ENST00000545215 REV3LO60673 3130 aa8.97□□□□□ -0.97
LDHA-223ENST00000545215 USP2O75604 605 aaPredicted RBP8.97□□□□□ -0.97
LDHA-223ENST00000545215 JUNDP17535 347 aa8.97□□□□□ -0.97
LDHA-223ENST00000545215 ID4P47928 161 aa8.97□□□□□ -0.97
LDHA-223ENST00000545215 ADGRE1Q14246 886 aa8.97□□□□□ -0.97
LDHA-223ENST00000545215 PTPRNQ16849 979 aa8.97□□□□□ -0.97
LDHA-223ENST00000545215 ELP3Q9H9T3 547 aa8.97□□□□□ -0.97
LDHA-223ENST00000545215 CD320Q9NPF0 282 aa8.97□□□□□ -0.97
LDHA-223ENST00000545215 POLKQ9UBT6 870 aa8.97□□□□□ -0.97
LDHA-223ENST00000545215 IVNS1ABPQ9Y6Y0 642 aa8.97□□□□□ -0.97
LDHA-223ENST00000545215 SETXQ7Z333 2677 aaKnown RBP8.96□□□□□ -0.97
LDHA-223ENST00000545215 BTBD19C9JJ37 291 aa8.96□□□□□ -0.98
LDHA-223ENST00000545215 ERC2O15083 957 aa8.96□□□□□ -0.98
LDHA-223ENST00000545215 U2AF1L5P0DN76 240 aaPredicted RBP8.96□□□□□ -0.98
LDHA-223ENST00000545215 U2AF1Q01081 240 aaKnown RBP eCLIP8.96□□□□□ -0.98
LDHA-223ENST00000545215 ZNF790Q6PG37 636 aa8.96□□□□□ -0.98
LDHA-223ENST00000545215 PLEKHM2Q8IWE5 1019 aa8.96□□□□□ -0.98
LDHA-223ENST00000545215 SCUBE3Q8IX30 993 aa8.96□□□□□ -0.98
LDHA-223ENST00000545215 EYA3Q99504 573 aa8.96□□□□□ -0.98
LDHA-223ENST00000545215 DEFB129Q9H1M3 183 aa8.96□□□□□ -0.98
LDHA-223ENST00000545215 PRDM12Q9H4Q4 367 aa8.96□□□□□ -0.98
LDHA-223ENST00000545215 MAP10Q9P2G4 905 aa8.96□□□□□ -0.98
LDHA-223ENST00000545215 COL1A1P02452 1464 aaPredicted RBP8.95□□□□□ -0.98
LDHA-223ENST00000545215 MED19A0JLT2 244 aaPredicted RBP8.95□□□□□ -0.98
LDHA-223ENST00000545215 USP17L3A6NCW0 530 aa8.95□□□□□ -0.98
LDHA-223ENST00000545215 USP17L4A6NCW7 530 aa8.95□□□□□ -0.98
LDHA-223ENST00000545215 HRO43593 1189 aa8.95□□□□□ -0.98
LDHA-223ENST00000545215 FLT3LGP49771 235 aa8.95□□□□□ -0.98
LDHA-223ENST00000545215 FCGRTP55899 365 aa8.95□□□□□ -0.98
LDHA-223ENST00000545215 SLC10A5Q5PT55 438 aa8.95□□□□□ -0.98
LDHA-223ENST00000545215 FOXD4L5Q5VV16 416 aaPredicted RBP8.95□□□□□ -0.98
LDHA-223ENST00000545215 SUSD4Q5VX71 490 aa8.95□□□□□ -0.98
LDHA-223ENST00000545215 ADGRD1Q6QNK2 874 aa8.95□□□□□ -0.98
LDHA-223ENST00000545215 USP17L2Q6R6M4 530 aa8.95□□□□□ -0.98
LDHA-223ENST00000545215 USP17L1Q7RTZ2 530 aa8.95□□□□□ -0.98
LDHA-223ENST00000545215 TMC4Q7Z404 712 aa8.95□□□□□ -0.98
LDHA-223ENST00000545215 FOXD4L4Q8WXT5 416 aaPredicted RBP8.95□□□□□ -0.98
LDHA-223ENST00000545215 MARVELD3Q96A59 401 aa8.95□□□□□ -0.98
LDHA-223ENST00000545215 ZMIZ1Q9ULJ6 1067 aa8.95□□□□□ -0.98
LDHA-223ENST00000545215 NSFL1CQ9UNZ2 370 aaKnown RBP8.95□□□□□ -0.98
LDHA-223ENST00000545215 GNEQ9Y223 722 aaKnown RBP8.95□□□□□ -0.98
LDHA-223ENST00000545215 USP16Q9Y5T5 823 aa8.95□□□□□ -0.98
LDHA-223ENST00000545215 FAM205CA6NFA0 338 aa8.94□□□□□ -0.98
LDHA-223ENST00000545215 IGFBP4P22692 258 aa8.94□□□□□ -0.98
LDHA-223ENST00000545215 SUPT20HL1Q3ZLR7 823 aa8.94□□□□□ -0.98
LDHA-223ENST00000545215 FMNL2Q96PY5 1086 aa8.94□□□□□ -0.98
LDHA-223ENST00000545215 DACH1Q9UI36 760 aa8.94□□□□□ -0.98
LDHA-223ENST00000545215 LTBP2Q14767 1821 aa8.93□□□□□ -0.98
LDHA-223ENST00000545215 ZFHX2Q9C0A1 2572 aaPredicted RBP8.93□□□□□ -0.98
LDHA-223ENST00000545215 DNAH12Q6ZR08 3092 aa8.93□□□□□ -0.98
LDHA-223ENST00000545215 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.93□□□□□ -0.98
LDHA-223ENST00000545215 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.93□□□□□ -0.98
LDHA-223ENST00000545215 SOWAHBA6NEL2 793 aa8.93□□□□□ -0.98
LDHA-223ENST00000545215 USP17L5A8MUK1 530 aa8.93□□□□□ -0.98
LDHA-223ENST00000545215 NR1I2O75469 434 aa8.93□□□□□ -0.98
LDHA-223ENST00000545215 NTSR2O95665 410 aa8.93□□□□□ -0.98
LDHA-223ENST00000545215 CETPP11597 493 aa8.93□□□□□ -0.98
LDHA-223ENST00000545215 ALADP13716 330 aa8.93□□□□□ -0.98
LDHA-223ENST00000545215 PTPN5P54829 565 aa8.93□□□□□ -0.98
LDHA-223ENST00000545215 PPP4CP60510 307 aa8.93□□□□□ -0.98
LDHA-223ENST00000545215 GRAPQ13588 217 aa8.93□□□□□ -0.98
LDHA-223ENST00000545215 TMEM164Q5U3C3 297 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms