RNA–Protein interactions for RNA: ENST00000543957.5

ITM2C-209, Transcript of integral membrane protein 2C, humanhuman

TSL 5

Gene ITM2C, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-209ENST00000543957 PRKAG2Q9UGJ0 569 aa15.24■□□□□ 0.03
ITM2C-209ENST00000543957 PHIPQ8WWQ0 1821 aa15.24■□□□□ 0.03
ITM2C-209ENST00000543957 CACNA1FO60840 1977 aa15.24■□□□□ 0.03
ITM2C-209ENST00000543957 CDH23Q9H251 3354 aa15.23■□□□□ 0.03
ITM2C-209ENST00000543957 HMGCS2P54868 508 aa15.23■□□□□ 0.03
ITM2C-209ENST00000543957 WWC1Q8IX03 1113 aa15.23■□□□□ 0.03
ITM2C-209ENST00000543957 ZNF280CQ8ND82 737 aa15.23■□□□□ 0.03
ITM2C-209ENST00000543957 DOCK1Q14185 1865 aa15.23■□□□□ 0.03
ITM2C-209ENST00000543957 DOCK2Q92608 1830 aa15.22■□□□□ 0.03
ITM2C-209ENST00000543957 NBPF7P0C2Y1 421 aaPredicted RBP15.22■□□□□ 0.03
ITM2C-209ENST00000543957 PLA2G5P39877 138 aa15.22■□□□□ 0.03
ITM2C-209ENST00000543957 RABL6Q3YEC7 729 aaPredicted RBP15.22■□□□□ 0.03
ITM2C-209ENST00000543957 SLC4A10Q6U841 1118 aa15.22■□□□□ 0.03
ITM2C-209ENST00000543957 KLHDC4Q8TBB5 520 aa15.22■□□□□ 0.03
ITM2C-209ENST00000543957 SRCIN1Q9C0H9 1055 aa15.22■□□□□ 0.03
ITM2C-209ENST00000543957 BICC1Q9H694 974 aaKnown RBP15.22■□□□□ 0.03
ITM2C-209ENST00000543957 PLXNB2O15031 1838 aa15.22■□□□□ 0.03
ITM2C-209ENST00000543957 SLC5A1P13866 664 aa15.21■□□□□ 0.03
ITM2C-209ENST00000543957 ATN1P54259 1190 aaPredicted RBP15.21■□□□□ 0.03
ITM2C-209ENST00000543957 SMAD3P84022 425 aaKnown RBP15.21■□□□□ 0.03
ITM2C-209ENST00000543957 CCDC27Q2M243 656 aa15.21■□□□□ 0.03
ITM2C-209ENST00000543957 C9orf50Q5SZB4 431 aa15.21■□□□□ 0.03
ITM2C-209ENST00000543957 LPIN2Q92539 896 aa15.21■□□□□ 0.03
ITM2C-209ENST00000543957 FAM122AQ96E09 287 aa15.21■□□□□ 0.03
ITM2C-209ENST00000543957 IL16Q14005 1332 aa15.2■□□□□ 0.02
ITM2C-209ENST00000543957 TBC1D12O60347 775 aa15.2■□□□□ 0.02
ITM2C-209ENST00000543957 PDE3AQ14432 1141 aa15.2■□□□□ 0.02
ITM2C-209ENST00000543957 CCL14Q16627 93 aa15.2■□□□□ 0.02
ITM2C-209ENST00000543957 GPRC5AQ8NFJ5 357 aa15.2■□□□□ 0.02
ITM2C-209ENST00000543957 TBC1D2Q9BYX2 928 aa15.2■□□□□ 0.02
ITM2C-209ENST00000543957 DDX4Q9NQI0 724 aaKnown RBP15.2■□□□□ 0.02
ITM2C-209ENST00000543957 RFX7Q2KHR2 1363 aa15.2■□□□□ 0.02
ITM2C-209ENST00000543957 FANCIQ9NVI1 1328 aa15.19■□□□□ 0.02
ITM2C-209ENST00000543957 PEX10O60683 326 aa15.19■□□□□ 0.02
ITM2C-209ENST00000543957 MAPK4P31152 587 aa15.19■□□□□ 0.02
ITM2C-209ENST00000543957 RGS2P41220 211 aa15.19■□□□□ 0.02
ITM2C-209ENST00000543957 IRX3P78415 501 aaPredicted RBP15.19■□□□□ 0.02
ITM2C-209ENST00000543957 PICALMQ13492 652 aa15.19■□□□□ 0.02
ITM2C-209ENST00000543957 ANKRD44Q8N8A2 993 aa15.19■□□□□ 0.02
ITM2C-209ENST00000543957 USP6NLQ92738 828 aa15.19■□□□□ 0.02
ITM2C-209ENST00000543957 OSBPL5Q9H0X9 879 aaPredicted RBP15.19■□□□□ 0.02
ITM2C-209ENST00000543957 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.19■□□□□ 0.02
ITM2C-209ENST00000543957 UTYO14607 1347 aa15.18■□□□□ 0.02
ITM2C-209ENST00000543957 GAKO14976 1311 aa15.18■□□□□ 0.02
ITM2C-209ENST00000543957 SALL1Q9NSC2 1324 aa15.18■□□□□ 0.02
ITM2C-209ENST00000543957 DNAH12Q6ZR08 3092 aa15.18■□□□□ 0.02
ITM2C-209ENST00000543957 TMEM265A0A087WTH1 108 aa15.18■□□□□ 0.02
ITM2C-209ENST00000543957 FAM196BA6NMK8 535 aa15.18■□□□□ 0.02
ITM2C-209ENST00000543957 RTP1P59025 263 aa15.18■□□□□ 0.02
ITM2C-209ENST00000543957 SH3D19Q5HYK7 790 aa15.18■□□□□ 0.02
ITM2C-209ENST00000543957 CCAR1Q8IX12 1150 aaKnown RBP15.18■□□□□ 0.02
ITM2C-209ENST00000543957 P2RX7Q99572 595 aaKnown RBP15.18■□□□□ 0.02
ITM2C-209ENST00000543957 TXNRD2Q9NNW7 524 aa15.18■□□□□ 0.02
ITM2C-209ENST00000543957 GNL3LQ9NVN8 582 aaKnown RBP15.18■□□□□ 0.02
ITM2C-209ENST00000543957 LOC285556D6RIA3 1793 aa15.18■□□□□ 0.02
ITM2C-209ENST00000543957 MYH13Q9UKX3 1938 aa15.17■□□□□ 0.02
ITM2C-209ENST00000543957 MAST2Q6P0Q8 1798 aa15.17■□□□□ 0.02
ITM2C-209ENST00000543957 EXOSC9Q06265 439 aaKnown RBP15.17■□□□□ 0.02
ITM2C-209ENST00000543957 MORN1Q5T089 497 aa15.17■□□□□ 0.02
ITM2C-209ENST00000543957 USP38Q8NB14 1042 aa15.17■□□□□ 0.02
ITM2C-209ENST00000543957 APBA2Q99767 749 aa15.17■□□□□ 0.02
ITM2C-209ENST00000543957 ATP11BQ9Y2G3 1177 aa15.17■□□□□ 0.02
ITM2C-209ENST00000543957 USP17L5A8MUK1 530 aa15.16■□□□□ 0.02
ITM2C-209ENST00000543957 DNM1LO00429 736 aa15.16■□□□□ 0.02
ITM2C-209ENST00000543957 ANP32CO43423 234 aa15.16■□□□□ 0.02
ITM2C-209ENST00000543957 HOXA7P31268 230 aaPredicted RBP15.16■□□□□ 0.02
ITM2C-209ENST00000543957 CAP2P40123 477 aa15.16■□□□□ 0.02
ITM2C-209ENST00000543957 HERVK_113P62684 666 aa15.16■□□□□ 0.02
ITM2C-209ENST00000543957 GPR142Q7Z601 462 aa15.16■□□□□ 0.02
ITM2C-209ENST00000543957 LPAR1Q92633 364 aa15.16■□□□□ 0.02
ITM2C-209ENST00000543957 BADQ92934 168 aa15.16■□□□□ 0.02
ITM2C-209ENST00000543957 PORCNQ9H237 461 aa15.16■□□□□ 0.02
ITM2C-209ENST00000543957 AS3MTQ9HBK9 375 aa15.16■□□□□ 0.02
ITM2C-209ENST00000543957 PRDM5Q9NQX1 630 aaPredicted RBP15.16■□□□□ 0.02
ITM2C-209ENST00000543957 RBPJLQ9UBG7 517 aa15.16■□□□□ 0.02
ITM2C-209ENST00000543957 DDX20Q9UHI6 824 aaKnown RBP15.16■□□□□ 0.02
ITM2C-209ENST00000543957 DENND2AQ9ULE3 1009 aa15.16■□□□□ 0.02
ITM2C-209ENST00000543957 EYA2O00167 538 aa15.15■□□□□ 0.02
ITM2C-209ENST00000543957 MSCO60682 206 aa15.15■□□□□ 0.02
ITM2C-209ENST00000543957 BTDP43251 543 aa15.15■□□□□ 0.02
ITM2C-209ENST00000543957 Q3C1V9 767 aa15.15■□□□□ 0.02
ITM2C-209ENST00000543957 MFSD14CQ5VZR4 134 aa15.15■□□□□ 0.02
ITM2C-209ENST00000543957 PLEKHH3Q7Z736 793 aa15.15■□□□□ 0.02
ITM2C-209ENST00000543957 DZIP1Q86YF9 867 aaKnown RBP15.15■□□□□ 0.02
ITM2C-209ENST00000543957 SLF2Q8IX21 1173 aa15.15■□□□□ 0.02
ITM2C-209ENST00000543957 ZGPATQ8N5A5 531 aaKnown RBP15.15■□□□□ 0.02
ITM2C-209ENST00000543957 TMOD4Q9NZQ9 345 aa15.15■□□□□ 0.02
ITM2C-209ENST00000543957 LTBP2Q14767 1821 aa15.15■□□□□ 0.02
ITM2C-209ENST00000543957 MYH2Q9UKX2 1941 aa15.14■□□□□ 0.01
ITM2C-209ENST00000543957 SEMA3EO15041 775 aa15.14■□□□□ 0.01
ITM2C-209ENST00000543957 CNGA1P29973 690 aa15.14■□□□□ 0.01
ITM2C-209ENST00000543957 BACE1P56817 501 aa15.14■□□□□ 0.01
ITM2C-209ENST00000543957 ERVK-9P63128 1117 aa15.14■□□□□ 0.01
ITM2C-209ENST00000543957 ERVK-24P63145 666 aa15.14■□□□□ 0.01
ITM2C-209ENST00000543957 MTMR2Q13614 643 aa15.14■□□□□ 0.01
ITM2C-209ENST00000543957 RRP1BQ14684 758 aaKnown RBP15.14■□□□□ 0.01
ITM2C-209ENST00000543957 GRIN2CQ14957 1233 aa15.14■□□□□ 0.01
ITM2C-209ENST00000543957 EDC3Q96F86 508 aaKnown RBP15.14■□□□□ 0.01
ITM2C-209ENST00000543957 FAM163AQ96GL9 167 aaPredicted RBP15.14■□□□□ 0.01
ITM2C-209ENST00000543957 NPM3O75607 178 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms