RNA–Protein interactions for RNA: ENST00000543697.5

RAP1B-230, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-230ENST00000543697 C10orf71Q711Q0 1435 aa10.04□□□□□ -0.8
RAP1B-230ENST00000543697 MAP3K19Q56UN5 1328 aa10.04□□□□□ -0.8
RAP1B-230ENST00000543697 HOXD8P13378 290 aaPredicted RBP10.03□□□□□ -0.8
RAP1B-230ENST00000543697 EIF4BP23588 611 aaKnown RBP10.03□□□□□ -0.8
RAP1B-230ENST00000543697 TAGLNQ01995 201 aaKnown RBP10.03□□□□□ -0.8
RAP1B-230ENST00000543697 TNP2Q05952 138 aa10.03□□□□□ -0.8
RAP1B-230ENST00000543697 PCSK7Q16549 785 aa10.03□□□□□ -0.8
RAP1B-230ENST00000543697 GALNT12Q8IXK2 581 aa10.03□□□□□ -0.8
RAP1B-230ENST00000543697 C16orf71Q8IYS4 520 aaPredicted RBP10.03□□□□□ -0.8
RAP1B-230ENST00000543697 MARCH10Q8NA82 808 aaPredicted RBP10.03□□□□□ -0.8
RAP1B-230ENST00000543697 CCDC74AQ96AQ1 378 aa10.03□□□□□ -0.8
RAP1B-230ENST00000543697 PNMA5Q96PV4 448 aa10.03□□□□□ -0.8
RAP1B-230ENST00000543697 LRRC4BQ9NT99 713 aa10.03□□□□□ -0.8
RAP1B-230ENST00000543697 PPP4R2Q9NY27 417 aa10.03□□□□□ -0.8
RAP1B-230ENST00000543697 COL18A1P39060 1754 aa10.03□□□□□ -0.8
RAP1B-230ENST00000543697 COL5A2P05997 1499 aaPredicted RBP10.03□□□□□ -0.8
RAP1B-230ENST00000543697 PHF20L1A8MW92 1017 aa10.02□□□□□ -0.81
RAP1B-230ENST00000543697 LBX1P52954 281 aa10.02□□□□□ -0.81
RAP1B-230ENST00000543697 ANKRD24Q8TF21 1146 aa10.02□□□□□ -0.81
RAP1B-230ENST00000543697 IP6K1Q92551 441 aa10.02□□□□□ -0.81
RAP1B-230ENST00000543697 TRERF1Q96PN7 1200 aa10.02□□□□□ -0.81
RAP1B-230ENST00000543697 NDFIP2Q9NV92 336 aa10.02□□□□□ -0.81
RAP1B-230ENST00000543697 CD2APQ9Y5K6 639 aa10.02□□□□□ -0.81
RAP1B-230ENST00000543697 SMG6Q86US8 1419 aaKnown RBP10.01□□□□□ -0.81
RAP1B-230ENST00000543697 KHNYNO15037 678 aaKnown RBP10.01□□□□□ -0.81
RAP1B-230ENST00000543697 ST8SIA5O15466 376 aa10.01□□□□□ -0.81
RAP1B-230ENST00000543697 MAPTP10636 758 aaKnown RBP10.01□□□□□ -0.81
RAP1B-230ENST00000543697 CES1P23141 567 aa10.01□□□□□ -0.81
RAP1B-230ENST00000543697 ITGA6P23229 1130 aa10.01□□□□□ -0.81
RAP1B-230ENST00000543697 HOXC9P31274 260 aa10.01□□□□□ -0.81
RAP1B-230ENST00000543697 VEGFBP49765 207 aa10.01□□□□□ -0.81
RAP1B-230ENST00000543697 UBAP2LQ14157 1087 aaKnown RBP10.01□□□□□ -0.81
RAP1B-230ENST00000543697 BACH2Q9BYV9 841 aa10.01□□□□□ -0.81
RAP1B-230ENST00000543697 GSX2Q9BZM3 304 aa10.01□□□□□ -0.81
RAP1B-230ENST00000543697 ZFYVE1Q9HBF4 777 aa10.01□□□□□ -0.81
RAP1B-230ENST00000543697 TMEM63CQ9P1W3 806 aa10.01□□□□□ -0.81
RAP1B-230ENST00000543697 FAM8A1Q9UBU6 413 aa10.01□□□□□ -0.81
RAP1B-230ENST00000543697 PXDNLA1KZ92 1463 aa10.01□□□□□ -0.81
RAP1B-230ENST00000543697 ABCC6O95255 1503 aa10.01□□□□□ -0.81
RAP1B-230ENST00000543697 CRB1P82279 1406 aa10□□□□□ -0.81
RAP1B-230ENST00000543697 SMC1BQ8NDV3 1235 aa10□□□□□ -0.81
RAP1B-230ENST00000543697 OR13H1Q8NG92 308 aa10□□□□□ -0.81
RAP1B-230ENST00000543697 C12orf49Q9H741 205 aa10□□□□□ -0.81
RAP1B-230ENST00000543697 FOXD3Q9UJU5 478 aaPredicted RBP10□□□□□ -0.81
RAP1B-230ENST00000543697 WDR17Q8IZU2 1322 aa10□□□□□ -0.81
RAP1B-230ENST00000543697 RTL1A6NKG5 1358 aa10□□□□□ -0.81
RAP1B-230ENST00000543697 FLT4P35916 1363 aa10□□□□□ -0.81
RAP1B-230ENST00000543697 A6NHS1 94 aa9.99□□□□□ -0.81
RAP1B-230ENST00000543697 PSAPP07602 524 aa9.99□□□□□ -0.81
RAP1B-230ENST00000543697 XRCC5P13010 732 aaKnown RBP9.99□□□□□ -0.81
RAP1B-230ENST00000543697 GRNP28799 593 aaKnown RBP9.99□□□□□ -0.81
RAP1B-230ENST00000543697 AVENQ9NQS1 362 aaPredicted RBP9.99□□□□□ -0.81
RAP1B-230ENST00000543697 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.99□□□□□ -0.81
RAP1B-230ENST00000543697 POTECB2RU33 542 aa9.98□□□□□ -0.81
RAP1B-230ENST00000543697 RARAP10276 462 aa9.98□□□□□ -0.81
RAP1B-230ENST00000543697 SPEM2Q0P670 501 aa9.98□□□□□ -0.81
RAP1B-230ENST00000543697 DDB1Q16531 1140 aa9.98□□□□□ -0.81
RAP1B-230ENST00000543697 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.98□□□□□ -0.815e-6■■■□□ 15.7
RAP1B-230ENST00000543697 HSP90AB2PQ58FF8 381 aa9.98□□□□□ -0.81
RAP1B-230ENST00000543697 TMEM87AQ8NBN3 555 aa9.98□□□□□ -0.81
RAP1B-230ENST00000543697 ZNF837Q96EG3 531 aaPredicted RBP9.98□□□□□ -0.81
RAP1B-230ENST00000543697 CHRDQ9H2X0 955 aa9.98□□□□□ -0.81
RAP1B-230ENST00000543697 POLKQ9UBT6 870 aa9.98□□□□□ -0.81
RAP1B-230ENST00000543697 USP20Q9Y2K6 914 aa9.98□□□□□ -0.81
RAP1B-230ENST00000543697 NHSQ6T4R5 1651 aa9.98□□□□□ -0.81
RAP1B-230ENST00000543697 FAM208AQ9UK61 1670 aaKnown RBP9.98□□□□□ -0.81
RAP1B-230ENST00000543697 IGSF1Q8N6C5 1336 aa9.98□□□□□ -0.81
RAP1B-230ENST00000543697 RGPD2P0DJD1 1756 aa9.98□□□□□ -0.81
RAP1B-230ENST00000543697 KCPQ6ZWJ8 1503 aa9.97□□□□□ -0.81
RAP1B-230ENST00000543697 DCDC2BA2VCK2 349 aa9.97□□□□□ -0.81
RAP1B-230ENST00000543697 DLL1O00548 723 aa9.97□□□□□ -0.81
RAP1B-230ENST00000543697 BNIP3LO60238 219 aa9.97□□□□□ -0.81
RAP1B-230ENST00000543697 ST13P50502 369 aaKnown RBP9.97□□□□□ -0.81
RAP1B-230ENST00000543697 PLAURQ03405 335 aa9.97□□□□□ -0.81
RAP1B-230ENST00000543697 DBN1Q16643 649 aa9.97□□□□□ -0.81
RAP1B-230ENST00000543697 KIAA0319Q5VV43 1072 aa9.97□□□□□ -0.81
RAP1B-230ENST00000543697 NANOS1Q8WY41 292 aaKnown RBP9.97□□□□□ -0.81
RAP1B-230ENST00000543697 CARD10Q9BWT7 1032 aa9.97□□□□□ -0.81
RAP1B-230ENST00000543697 SUV39H2Q9H5I1 410 aa9.97□□□□□ -0.81
RAP1B-230ENST00000543697 TLR7Q9NYK1 1049 aaKnown RBP9.97□□□□□ -0.81
RAP1B-230ENST00000543697 WNK3Q9BYP7 1800 aa9.97□□□□□ -0.81
RAP1B-230ENST00000543697 INSRP06213 1382 aa9.97□□□□□ -0.81
RAP1B-230ENST00000543697 KIF24Q5T7B8 1368 aa9.97□□□□□ -0.81
RAP1B-230ENST00000543697 NPC1L1Q9UHC9 1359 aa9.97□□□□□ -0.81
RAP1B-230ENST00000543697 TNRC6CQ9HCJ0 1690 aaKnown RBP9.96□□□□□ -0.81
RAP1B-230ENST00000543697 SZT2Q5T011 3432 aa9.96□□□□□ -0.81
RAP1B-230ENST00000543697 HSPA8P11142 646 aaKnown RBP9.96□□□□□ -0.82
RAP1B-230ENST00000543697 GSTT1P30711 240 aa9.96□□□□□ -0.82
RAP1B-230ENST00000543697 SFSWAPQ12872 951 aaKnown RBP9.96□□□□□ -0.82
RAP1B-230ENST00000543697 NPAS3Q8IXF0 933 aa9.96□□□□□ -0.82
RAP1B-230ENST00000543697 BTAF1O14981 1849 aa9.96□□□□□ -0.82
RAP1B-230ENST00000543697 SASH3O75995 380 aa9.95□□□□□ -0.82
RAP1B-230ENST00000543697 KIF4AO95239 1232 aa9.95□□□□□ -0.82
RAP1B-230ENST00000543697 THBS1P07996 1170 aa9.95□□□□□ -0.82
RAP1B-230ENST00000543697 FGFR3P22607 806 aa9.95□□□□□ -0.82
RAP1B-230ENST00000543697 MTHFSP49914 203 aa9.95□□□□□ -0.82
RAP1B-230ENST00000543697 NRLP54845 237 aa9.95□□□□□ -0.82
RAP1B-230ENST00000543697 HYAL2Q12891 473 aa9.95□□□□□ -0.82
RAP1B-230ENST00000543697 USHBP1Q8N6Y0 703 aa9.95□□□□□ -0.82
RAP1B-230ENST00000543697 C1orf127Q8N9H9 656 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms