RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ATP6V1DQ9Y5K8 247 aa10.93□□□□□ -0.66
GNE-206ENST00000543356 MYH1P12882 1939 aa10.93□□□□□ -0.66
GNE-206ENST00000543356 SMIM22K7EJ46 135 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 USP17L8P0C7I0 530 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 CYP2D6P10635 497 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 PDE4BQ07343 736 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 WTAPQ15007 396 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 SKOR2Q2VWA4 1001 aaPredicted RBP10.92□□□□□ -0.66
GNE-206ENST00000543356 MCTP1Q6DN14 999 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 TGFBRAP1Q8WUH2 860 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 UBAC1Q9BSL1 405 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 MRIQ9BWK5 157 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 FLT1P17948 1338 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 VPS37CA5D8V6 355 aaPredicted RBP10.92□□□□□ -0.66
GNE-206ENST00000543356 USP17L3A6NCW0 530 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 USP17L4A6NCW7 530 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 CCDC69A6NI79 296 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 ZBTB43O43298 467 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 METAP2P50579 478 aaKnown RBP eCLIP10.92□□□□□ -0.66
GNE-206ENST00000543356 HDLBPQ00341 1268 aaKnown RBP10.92□□□□□ -0.66
GNE-206ENST00000543356 SEC23AQ15436 765 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 NFXL1Q6ZNB6 911 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 USP17L1Q7RTZ2 530 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 FAM184AQ8NB25 1140 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 RGS22Q8NE09 1264 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 UPF1Q92900 1129 aaKnown RBP eCLIP10.92□□□□□ -0.665e-13■■■■■ 43.7
GNE-206ENST00000543356 SENP2Q9HC62 589 aa10.92□□□□□ -0.66
GNE-206ENST00000543356 PPIP5K2O43314 1243 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 TRAK2O60296 914 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 MAPKAPK5Q8IW41 473 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 STK11IPQ8N1F8 1099 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 TEKT1Q969V4 418 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 ZSCAN10Q96SZ4 725 aaPredicted RBP10.91□□□□□ -0.66
GNE-206ENST00000543356 MXD3Q9BW11 206 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 SLC12A7Q9Y666 1083 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 TNKSO95271 1327 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 FER1L6Q2WGJ9 1857 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 DTNBO60941 627 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 CDKL5O76039 1030 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 EVX2Q03828 476 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 R3HDM1Q15032 1099 aaKnown RBP10.91□□□□□ -0.66
GNE-206ENST00000543356 SYNE3Q6ZMZ3 975 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 CDC37L1Q7L3B6 337 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 IQCA1Q86XH1 822 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 DDX11Q96FC9 970 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 SGIP1Q9BQI5 828 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 PIM2Q9P1W9 311 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 ATF5Q9Y2D1 282 aaPredicted RBP10.91□□□□□ -0.66
GNE-206ENST00000543356 MYH15Q9Y2K3 1946 aa10.91□□□□□ -0.66
GNE-206ENST00000543356 GOLGA8AA7E2F4 631 aa10.9□□□□□ -0.66
GNE-206ENST00000543356 F8W031 263 aaPredicted RBP10.9□□□□□ -0.66
GNE-206ENST00000543356 RANBP6O60518 1105 aaKnown RBP10.9□□□□□ -0.66
GNE-206ENST00000543356 ZDHHC15Q96MV8 337 aa10.9□□□□□ -0.66
GNE-206ENST00000543356 ZKSCAN3Q9BRR0 538 aa10.9□□□□□ -0.66
GNE-206ENST00000543356 KCNQ5Q9NR82 932 aa10.9□□□□□ -0.66
GNE-206ENST00000543356 LMBRD1Q9NUN5 540 aa10.9□□□□□ -0.66
GNE-206ENST00000543356 COL4A5P29400 1685 aa10.9□□□□□ -0.66
GNE-206ENST00000543356 CPLX1O14810 134 aa10.9□□□□□ -0.66
GNE-206ENST00000543356 CPLX2Q6PUV4 134 aaKnown RBP10.9□□□□□ -0.66
GNE-206ENST00000543356 MICU3Q86XE3 530 aa10.9□□□□□ -0.66
GNE-206ENST00000543356 ENAHQ8N8S7 591 aaPredicted RBP10.9□□□□□ -0.66
GNE-206ENST00000543356 TMEM87AQ8NBN3 555 aa10.9□□□□□ -0.66
GNE-206ENST00000543356 PRDM1O75626 825 aa10.89□□□□□ -0.67
GNE-206ENST00000543356 POLR3DP05423 398 aaPredicted RBP10.89□□□□□ -0.67
GNE-206ENST00000543356 FDPSP14324 419 aaKnown RBP10.89□□□□□ -0.67
GNE-206ENST00000543356 CRKP46108 304 aa10.89□□□□□ -0.67
GNE-206ENST00000543356 ZNF654Q8IZM8 581 aa10.89□□□□□ -0.67
GNE-206ENST00000543356 ZNF287Q9HBT7 754 aa10.89□□□□□ -0.67
GNE-206ENST00000543356 CD2APQ9Y5K6 639 aa10.89□□□□□ -0.67
GNE-206ENST00000543356 MYO3BQ8WXR4 1341 aa10.89□□□□□ -0.67
GNE-206ENST00000543356 STK36Q9NRP7 1315 aa10.89□□□□□ -0.67
GNE-206ENST00000543356 YDJCA8MPS7 323 aa10.89□□□□□ -0.67
GNE-206ENST00000543356 H3BQV1 296 aa10.89□□□□□ -0.67
GNE-206ENST00000543356 CDC27P30260 824 aa10.89□□□□□ -0.67
GNE-206ENST00000543356 PPP2R5BQ15173 497 aa10.89□□□□□ -0.67
GNE-206ENST00000543356 DALRD3Q5D0E6 543 aaKnown RBP10.89□□□□□ -0.67
GNE-206ENST00000543356 IFFO2Q5TF58 517 aa10.89□□□□□ -0.67
GNE-206ENST00000543356 APOBEC3HQ6NTF7 200 aaKnown RBP10.89□□□□□ -0.67
GNE-206ENST00000543356 C16orf86Q6ZW13 317 aa10.89□□□□□ -0.67
GNE-206ENST00000543356 RAB11FIP4Q86YS3 637 aa10.89□□□□□ -0.67
GNE-206ENST00000543356 FAM217BQ9NTX9 383 aaPredicted RBP10.89□□□□□ -0.67
GNE-206ENST00000543356 SAP30BPQ9UHR5 308 aaKnown RBP10.89□□□□□ -0.67
GNE-206ENST00000543356 SERPINA10Q9UK55 444 aa10.89□□□□□ -0.67
GNE-206ENST00000543356 WDHD1O75717 1129 aaPredicted RBP10.88□□□□□ -0.67
GNE-206ENST00000543356 SCNN1DP51172 638 aa10.88□□□□□ -0.67
GNE-206ENST00000543356 NTRK3Q16288 839 aa10.88□□□□□ -0.67
GNE-206ENST00000543356 CCDC178Q5BJE1 867 aa10.88□□□□□ -0.67
GNE-206ENST00000543356 IFIT1BQ5T764 474 aaKnown RBP10.88□□□□□ -0.67
GNE-206ENST00000543356 NAP1L5Q96NT1 182 aaPredicted RBP10.88□□□□□ -0.67
GNE-206ENST00000543356 ZSCAN16Q9H4T2 348 aaPredicted RBP10.88□□□□□ -0.67
GNE-206ENST00000543356 USP40Q9NVE5 1235 aa10.88□□□□□ -0.67
GNE-206ENST00000543356 CCDC196A0A1B0GTZ2 297 aa10.88□□□□□ -0.67
GNE-206ENST00000543356 TSPY2A6NKD2 308 aa10.88□□□□□ -0.67
GNE-206ENST00000543356 DDAH1O94760 285 aa10.88□□□□□ -0.67
GNE-206ENST00000543356 PLCD1P51178 756 aa10.88□□□□□ -0.67
GNE-206ENST00000543356 RESTQ13127 1097 aa10.88□□□□□ -0.67
GNE-206ENST00000543356 RTN1Q16799 776 aa10.88□□□□□ -0.67
GNE-206ENST00000543356 KLHL40Q2TBA0 621 aa10.88□□□□□ -0.67
GNE-206ENST00000543356 CDC42EP5Q6NZY7 148 aa10.88□□□□□ -0.67
GNE-206ENST00000543356 DYNLL2Q96FJ2 89 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms