RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 GPR161Q8N6U8 529 aaKnown RBP9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 SPATA5Q8NB90 893 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 ZFP91Q96JP5 570 aaPredicted RBP9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 PPP1R13BQ96KQ4 1090 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 ALDH8A1Q9H2A2 487 aaPredicted RBP9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 PPP2R2CQ9Y2T4 447 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 COL3A1P02461 1466 aaPredicted RBP9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 ERBB3P21860 1342 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 EFCAB8A8MWE9 144 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 TACC1O75410 805 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 ATP6V1AP38606 617 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 KIF23Q02241 960 aaPredicted RBP9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 CCDC122Q5T0U0 273 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 UTP14CQ5TAP6 766 aaKnown RBP9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 APOA5Q6Q788 366 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 HEATR3Q7Z4Q2 680 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 ZBTB38Q8NAP3 1195 aaPredicted RBP9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 STAMQ92783 540 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 DRC1Q96MC2 740 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 NAPGQ99747 312 aaPredicted RBP9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 NAA15Q9BXJ9 866 aaKnown RBP9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 FAM107BQ9H098 131 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 MMRN2Q9H8L6 949 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 GPHNQ9NQX3 736 aaPredicted RBP9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 SYNRGQ9UMZ2 1314 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 TSPY3P0CV98 308 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 TSPY8P0CW00 308 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 NCBP1Q09161 790 aaKnown RBP9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 ZNF827Q17R98 1081 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 IFNL3Q8IZI9 196 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 RSPH14Q9UHP6 348 aa9.28□□□□□ -0.92
PRKAB1-207ENST00000542698 CPS1P31327 1500 aa9.27□□□□□ -0.92
PRKAB1-207ENST00000542698 STX10O60499 249 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 PPP6R2O75170 966 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 PCCAP05165 728 aaPredicted RBP9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 SLFNL1Q499Z3 407 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 FERMT2Q96AC1 680 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 CAPZA3Q96KX2 299 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 ATG3Q9NT62 314 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 MCM9Q9NXL9 1143 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 CTDP1Q9Y5B0 961 aaPredicted RBP9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 M0R2C6 588 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 ADAMTS2O95450 1211 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 TBC1D8BQ0IIM8 1120 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 HLTFQ14527 1009 aaKnown RBP eCLIP9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 UBE3CQ15386 1083 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 CCDC144BQ3MJ40 725 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 TTC38Q5R3I4 469 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 VPS36Q86VN1 386 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 ZNF654Q8IZM8 581 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 FANCBQ8NB91 859 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 PLIN2Q99541 437 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 DESI2Q9BSY9 194 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 CTNND2Q9UQB3 1225 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 SALL3Q9BXA9 1300 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 hCG_1642624A0A1W2PR95 340 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 TRIM14Q14142 442 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 SMC1AQ14683 1233 aaKnown RBP9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 CYP26C1Q6V0L0 522 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 PIK3AP1Q6ZUJ8 805 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 CMTR1Q8N1G2 835 aaKnown RBP9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 TRIML1Q8N9V2 468 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 NLRP3Q96P20 1036 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 VPS54Q9P1Q0 977 aa9.27□□□□□ -0.93
PRKAB1-207ENST00000542698 DIP2CQ9Y2E4 1556 aa9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 BICDL2A1A5D9 508 aa9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 H7C1W4 665 aa9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 TICAM2Q86XR7 235 aa9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 ZSCAN29Q8IWY8 852 aaPredicted RBP9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 PUS7LQ9H0K6 701 aaKnown RBP9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 KCNF1Q9H3M0 494 aa9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 SEPT11Q9NVA2 429 aaKnown RBP9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 PDE8BO95263 885 aa9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 NOP2P46087 812 aaKnown RBP9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 PAK1Q13153 545 aa9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 NAA30Q147X3 362 aaPredicted RBP9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 ZFYVE27Q5T4F4 411 aa9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 LRRC27Q9C0I9 530 aa9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 GJB4Q9NTQ9 266 aa9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 MROH5Q6ZUA9 1318 aa9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 ATP1A3P13637 1013 aa9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 ZNF76P36508 570 aa9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 NAPAP54920 295 aa9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 PI16Q6UXB8 463 aa9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 SMARCC2Q8TAQ2 1214 aa9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 WWC3Q9ULE0 1092 aa9.26□□□□□ -0.93
PRKAB1-207ENST00000542698 OVOS2A0A0J9YW53 1432 aa9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 OVOS2Q6IE36 1432 aa9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 MPHOSPH10O00566 681 aaKnown RBP9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 PPP1R12BO60237 982 aaPredicted RBP9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 OAS2P29728 719 aaKnown RBP9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 CTSWP56202 376 aa9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 FMR1NBQ8N0W7 255 aaPredicted RBP9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 AIFM3Q96NN9 605 aa9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 CD163L1Q9NR16 1453 aa9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 ZC3H13Q5T200 1668 aaKnown RBP9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 UBAP1LF5GYI3 381 aa9.25□□□□□ -0.93
PRKAB1-207ENST00000542698 PHKA1P46020 1223 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms