RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 TBC1D10BQ4KMP7 808 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-219ENST00000542112 TRIM46Q7Z4K8 759 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 BTLAQ7Z6A9 289 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 PGBD3Q8N328 593 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 ACRBPQ8NEB7 543 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 BICD2Q8TD16 824 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 DTNBP1Q96EV8 351 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 TRIM7Q9C029 511 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 CRISPLD1Q9H336 500 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 IRAK4Q9NWZ3 460 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 KIAA1522Q9P206 1035 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-219ENST00000542112 FNDC3AQ9Y2H6 1198 aaKnown RBP5.02□□□□□ -1.61
SNHG1-219ENST00000542112 GJA3Q9Y6H8 435 aa5.02□□□□□ -1.61
SNHG1-219ENST00000542112 PRG4Q92954 1404 aaPredicted RBP5.02□□□□□ -1.61
SNHG1-219ENST00000542112 PTPN23Q9H3S7 1636 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 ATXN2Q99700 1313 aaKnown RBP5.01□□□□□ -1.61
SNHG1-219ENST00000542112 A0A1W2PNR3 127 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 GOLGA6L10A6NI86 522 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 FIGNL2A6NMB9 653 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 H7C1W4 665 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 OPLAHO14841 1288 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 EPB41L2O43491 1005 aaKnown RBP5.01□□□□□ -1.61
SNHG1-219ENST00000542112 NEMFO60524 1076 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 GFRA3O60609 400 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 F11P03951 625 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 LDHBP07195 334 aaKnown RBP5.01□□□□□ -1.61
SNHG1-219ENST00000542112 CT47B1P0C2W7 299 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-219ENST00000542112 RLBP1P12271 317 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 RHOQP17081 205 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 CHMLP26374 656 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 INPP5BP32019 993 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 SESN3P58005 492 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 INHBEP58166 350 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 DEUP1Q05D60 604 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 LBRQ14739 615 aaKnown RBP5.01□□□□□ -1.61
SNHG1-219ENST00000542112 SLMAPQ14BN4 828 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 ENOX2Q16206 610 aaKnown RBP5.01□□□□□ -1.61
SNHG1-219ENST00000542112 CCDC181Q5TID7 509 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 ALG1LQ6GMV1 187 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 RCSD1Q6JBY9 416 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 LRRC69Q6ZNQ3 347 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 OTUD6AQ7L8S5 288 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 BRAPQ7Z569 592 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 TADA2BQ86TJ2 420 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 NLRP8Q86W28 1048 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 ANKRD13BQ86YJ7 626 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 CCDC50Q8IVM0 306 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 MICALL1Q8N3F8 863 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 ZNF280CQ8ND82 737 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 TDRD7Q8NHU6 1098 aaKnown RBP5.01□□□□□ -1.61
SNHG1-219ENST00000542112 GPT2Q8TD30 523 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 MAGEC3Q8TD91 643 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 FBF1Q8TES7 1133 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 TEKT1Q969V4 418 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 HSH2DQ96JZ2 352 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 ZFP42Q96MM3 310 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 STK31Q9BXU1 1019 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 UBXN6Q9BZV1 441 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 NIF3L1Q9GZT8 377 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 RBSNQ9H1K0 784 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 ZSCAN16Q9H4T2 348 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-219ENST00000542112 C11orf16Q9NQ32 467 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 MAGEC2Q9UBF1 373 aaPredicted RBP5.01□□□□□ -1.61
SNHG1-219ENST00000542112 BLOC1S6Q9UL45 172 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 MYO6Q9UM54 1294 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 CROCC2H7BZ55 1655 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 ITSN2Q9NZM3 1697 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 ROCK1Q13464 1354 aa5.01□□□□□ -1.61
SNHG1-219ENST00000542112 ZCCHC11Q5TAX3 1644 aaKnown RBP5.01□□□□□ -1.61
SNHG1-219ENST00000542112 ATP10BO94823 1461 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 TCOF1Q13428 1488 aaKnown RBP5□□□□□ -1.61
SNHG1-219ENST00000542112 SOS1Q07889 1333 aaPredicted RBP5□□□□□ -1.61
SNHG1-219ENST00000542112 CCDC171Q6TFL3 1326 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 CARMIL2Q6F5E8 1435 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 GCC2Q8IWJ2 1684 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 EIF3CLB5ME19 914 aaKnown RBP5□□□□□ -1.61
SNHG1-219ENST00000542112 GOLGA6L19H0YKK7 550 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 IPO5O00410 1097 aaKnown RBP5□□□□□ -1.61
SNHG1-219ENST00000542112 CHUKO15111 745 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 NEBLO76041 1014 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 VCAM1P19320 739 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 ALDH1B1P30837 517 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 MNAT1P51948 309 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 TUBB4BP68371 445 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 TAGLNQ01995 201 aaKnown RBP5□□□□□ -1.61
SNHG1-219ENST00000542112 NEXNQ0ZGT2 675 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 G3BP1Q13283 466 aaKnown RBP eCLIP5□□□□□ -1.61
SNHG1-219ENST00000542112 TSNAXIP1Q2TAA8 658 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 FOXD4L6Q3SYB3 417 aaPredicted RBP5□□□□□ -1.61
SNHG1-219ENST00000542112 LONRF3Q496Y0 759 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 CCDC38Q502W7 563 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 EFHC2Q5JST6 749 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 ACBD5Q5T8D3 534 aaPredicted RBP5□□□□□ -1.61
SNHG1-219ENST00000542112 SAMD5Q5TGI4 173 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 ZKSCAN2Q63HK3 967 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 PDE12Q6L8Q7 609 aaKnown RBP5□□□□□ -1.61
SNHG1-219ENST00000542112 XKR5Q6UX68 686 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 FOXD4L3Q6VB84 417 aaPredicted RBP5□□□□□ -1.61
SNHG1-219ENST00000542112 CCDC73Q6ZRK6 1079 aa5□□□□□ -1.61
SNHG1-219ENST00000542112 NOL8Q76FK4 1167 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 193.7 ms