RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 ROBO3Q96MS0 1386 aa14.71□□□□□ -0.05
SMAD3-204ENST00000540846 APPP05067 770 aa14.71□□□□□ -0.05
SMAD3-204ENST00000540846 HIRAP54198 1017 aaPredicted RBP14.71□□□□□ -0.05
SMAD3-204ENST00000540846 KIF4BQ2VIQ3 1234 aa14.71□□□□□ -0.05
SMAD3-204ENST00000540846 SBK1Q52WX2 424 aa14.71□□□□□ -0.05
SMAD3-204ENST00000540846 DPY19L2Q6NUT2 758 aa14.71□□□□□ -0.05
SMAD3-204ENST00000540846 Q6ZUG5 572 aa14.71□□□□□ -0.05
SMAD3-204ENST00000540846 FBXL16Q8N461 479 aa14.71□□□□□ -0.05
SMAD3-204ENST00000540846 SMC3Q9UQE7 1217 aa14.71□□□□□ -0.05
SMAD3-204ENST00000540846 ATRNL1Q5VV63 1379 aa14.71□□□□□ -0.06
SMAD3-204ENST00000540846 MYH8P13535 1937 aa14.7□□□□□ -0.06
SMAD3-204ENST00000540846 CYP2D7A0A087X1C5 515 aa14.7□□□□□ -0.06
SMAD3-204ENST00000540846 CLRN2A0PK11 232 aa14.7□□□□□ -0.06
SMAD3-204ENST00000540846 USP17L12C9JPN9 530 aa14.7□□□□□ -0.06
SMAD3-204ENST00000540846 USP17L21D6R901 530 aa14.7□□□□□ -0.06
SMAD3-204ENST00000540846 CYP2D6P10635 497 aa14.7□□□□□ -0.06
SMAD3-204ENST00000540846 USP5P45974 858 aa14.7□□□□□ -0.06
SMAD3-204ENST00000540846 TDO2P48775 406 aa14.7□□□□□ -0.06
SMAD3-204ENST00000540846 FKBP1CQ5VVH2 108 aa14.7□□□□□ -0.06
SMAD3-204ENST00000540846 TBC1D10CQ8IV04 446 aa14.7□□□□□ -0.06
SMAD3-204ENST00000540846 ZFPM1Q8IX07 1006 aa14.7□□□□□ -0.06
SMAD3-204ENST00000540846 NACAP1Q9BZK3 213 aa14.7□□□□□ -0.06
SMAD3-204ENST00000540846 OSBPL5Q9H0X9 879 aaPredicted RBP14.7□□□□□ -0.06
SMAD3-204ENST00000540846 ANAPC4Q9UJX5 808 aa14.7□□□□□ -0.06
SMAD3-204ENST00000540846 WDR19Q8NEZ3 1342 aa14.7□□□□□ -0.06
SMAD3-204ENST00000540846 WDR33Q9C0J8 1336 aaKnown RBP14.7□□□□□ -0.06
SMAD3-204ENST00000540846 GOLGA6L22H0YM25 854 aa14.69□□□□□ -0.06
SMAD3-204ENST00000540846 H7C1D1 291 aa14.69□□□□□ -0.06
SMAD3-204ENST00000540846 HAND2P61296 217 aa14.69□□□□□ -0.06
SMAD3-204ENST00000540846 SH3BP5LQ7L8J4 393 aa14.69□□□□□ -0.06
SMAD3-204ENST00000540846 MB21D2Q8IYB1 491 aaPredicted RBP14.69□□□□□ -0.06
SMAD3-204ENST00000540846 NECAB1Q8N987 351 aa14.69□□□□□ -0.06
SMAD3-204ENST00000540846 ARPP21Q9UBL0 812 aaPredicted RBP14.69□□□□□ -0.06
SMAD3-204ENST00000540846 ZNF213O14771 459 aa14.68□□□□□ -0.06
SMAD3-204ENST00000540846 ENTPD3O75355 529 aa14.68□□□□□ -0.06
SMAD3-204ENST00000540846 PPARAQ07869 468 aa14.68□□□□□ -0.06
SMAD3-204ENST00000540846 PICALMQ13492 652 aa14.68□□□□□ -0.06
SMAD3-204ENST00000540846 RBM26Q5T8P6 1007 aaKnown RBP14.68□□□□□ -0.06
SMAD3-204ENST00000540846 C12orf60Q5U649 245 aa14.68□□□□□ -0.06
SMAD3-204ENST00000540846 NKX2-3Q8TAU0 364 aa14.68□□□□□ -0.06
SMAD3-204ENST00000540846 GTF3C6Q969F1 213 aa14.68□□□□□ -0.06
SMAD3-204ENST00000540846 ADARB2Q9NS39 739 aaKnown RBP14.68□□□□□ -0.06
SMAD3-204ENST00000540846 MCM9Q9NXL9 1143 aa14.68□□□□□ -0.06
SMAD3-204ENST00000540846 PGAP2Q9UHJ9 254 aa14.68□□□□□ -0.06
SMAD3-204ENST00000540846 TRAK2O60296 914 aa14.68□□□□□ -0.06
SMAD3-204ENST00000540846 GJB2P29033 226 aa14.68□□□□□ -0.06
SMAD3-204ENST00000540846 PLCD1P51178 756 aa14.68□□□□□ -0.06
SMAD3-204ENST00000540846 BRF1Q92994 677 aa14.68□□□□□ -0.06
SMAD3-204ENST00000540846 SAP30BPQ9UHR5 308 aaKnown RBP14.68□□□□□ -0.06
SMAD3-204ENST00000540846 GREB1LQ9C091 1923 aaPredicted RBP14.68□□□□□ -0.06
SMAD3-204ENST00000540846 FGRP09769 529 aa14.67□□□□□ -0.06
SMAD3-204ENST00000540846 SYT1P21579 422 aa14.67□□□□□ -0.06
SMAD3-204ENST00000540846 LMOD1P29536 600 aaPredicted RBP14.67□□□□□ -0.06
SMAD3-204ENST00000540846 EVCP57679 992 aa14.67□□□□□ -0.06
SMAD3-204ENST00000540846 CTDSPL2Q05D32 466 aa14.67□□□□□ -0.06
SMAD3-204ENST00000540846 FAM83AQ86UY5 434 aa14.67□□□□□ -0.06
SMAD3-204ENST00000540846 NCOA7Q8NI08 942 aa14.67□□□□□ -0.06
SMAD3-204ENST00000540846 HACL1Q9UJ83 578 aa14.67□□□□□ -0.06
SMAD3-204ENST00000540846 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.67□□□□□ -0.06
SMAD3-204ENST00000540846 DDTLA6NHG4 134 aaPredicted RBP14.66□□□□□ -0.06
SMAD3-204ENST00000540846 TCP10L2B9ZVM9 353 aa14.66□□□□□ -0.06
SMAD3-204ENST00000540846 STX6O43752 255 aa14.66□□□□□ -0.06
SMAD3-204ENST00000540846 MYO1BO43795 1136 aa14.66□□□□□ -0.06
SMAD3-204ENST00000540846 PFKFB2O60825 505 aa14.66□□□□□ -0.06
SMAD3-204ENST00000540846 PDIA4P13667 645 aaKnown RBP14.66□□□□□ -0.06
SMAD3-204ENST00000540846 MCM5P33992 734 aa14.66□□□□□ -0.06
SMAD3-204ENST00000540846 FGD1P98174 961 aa14.66□□□□□ -0.06
SMAD3-204ENST00000540846 GABPAQ06546 454 aa14.66□□□□□ -0.06
SMAD3-204ENST00000540846 TCP10Q12799 353 aa14.66□□□□□ -0.06
SMAD3-204ENST00000540846 GSE1Q14687 1217 aa14.66□□□□□ -0.06
SMAD3-204ENST00000540846 SKOR2Q2VWA4 1001 aaPredicted RBP14.66□□□□□ -0.06
SMAD3-204ENST00000540846 SLC4A8Q2Y0W8 1093 aa14.66□□□□□ -0.06
SMAD3-204ENST00000540846 RALYLQ86SE5 291 aaKnown RBP14.66□□□□□ -0.06
SMAD3-204ENST00000540846 CDAN1Q8IWY9 1227 aa14.66□□□□□ -0.06
SMAD3-204ENST00000540846 STAG1Q8WVM7 1258 aa14.66□□□□□ -0.06
SMAD3-204ENST00000540846 LRRC2Q9BYS8 371 aa14.66□□□□□ -0.06
SMAD3-204ENST00000540846 TAF1DQ9H5J8 278 aaPredicted RBP14.66□□□□□ -0.06
SMAD3-204ENST00000540846 INCENPQ9NQS7 918 aa14.66□□□□□ -0.06
SMAD3-204ENST00000540846 NEDD4P46934 1319 aa14.66□□□□□ -0.06
SMAD3-204ENST00000540846 PAPPA2Q9BXP8 1791 aa14.65□□□□□ -0.06
SMAD3-204ENST00000540846 DCAF8L1A6NGE4 600 aa14.65□□□□□ -0.06
SMAD3-204ENST00000540846 MINDY4BA8MYZ0 360 aa14.65□□□□□ -0.06
SMAD3-204ENST00000540846 ZSCAN22P10073 491 aaPredicted RBP14.65□□□□□ -0.06
SMAD3-204ENST00000540846 EPHX2P34913 555 aa14.65□□□□□ -0.06
SMAD3-204ENST00000540846 FAM151AQ8WW52 585 aa14.65□□□□□ -0.06
SMAD3-204ENST00000540846 TEPSINQ96N21 525 aa14.65□□□□□ -0.06
SMAD3-204ENST00000540846 GGA3Q9NZ52 723 aa14.65□□□□□ -0.06
SMAD3-204ENST00000540846 TMOD2Q9NZR1 351 aa14.65□□□□□ -0.06
SMAD3-204ENST00000540846 PITPNM2Q9BZ72 1349 aa14.64□□□□□ -0.07
SMAD3-204ENST00000540846 PRC1O43663 620 aa14.64□□□□□ -0.07
SMAD3-204ENST00000540846 ANTXR2P58335 489 aa14.64□□□□□ -0.07
SMAD3-204ENST00000540846 AKNAD1Q5T1N1 836 aa14.64□□□□□ -0.07
SMAD3-204ENST00000540846 ANGEL2Q5VTE6 544 aaKnown RBP14.64□□□□□ -0.07
SMAD3-204ENST00000540846 MCTP1Q6DN14 999 aa14.64□□□□□ -0.07
SMAD3-204ENST00000540846 USP50Q70EL3 339 aaPredicted RBP14.64□□□□□ -0.07
SMAD3-204ENST00000540846 METTL16Q86W50 562 aaKnown RBP14.64□□□□□ -0.07
SMAD3-204ENST00000540846 DYNLL2Q96FJ2 89 aa14.64□□□□□ -0.07
SMAD3-204ENST00000540846 ZNF274Q96GC6 653 aaPredicted RBP14.64□□□□□ -0.07
SMAD3-204ENST00000540846 DNAJC18Q9H819 358 aa14.64□□□□□ -0.07
SMAD3-204ENST00000540846 VEZTQ9HBM0 779 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms