RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 DIAPH3Q9NSV4 1193 aa23.31■■□□□ 1.32
DDX55-207ENST00000540763 PALD1Q9ULE6 856 aa23.31■■□□□ 1.32
DDX55-207ENST00000540763 UBE2Q2LH0YL09 131 aa23.3■■□□□ 1.32
DDX55-207ENST00000540763 FOXP4Q8IVH2 680 aaPredicted RBP23.3■■□□□ 1.32
DDX55-207ENST00000540763 SEC62Q99442 399 aaKnown RBP23.3■■□□□ 1.32
DDX55-207ENST00000540763 A0A0D9SFI3 127 aa23.29■■□□□ 1.32
DDX55-207ENST00000540763 PRKAB2O43741 272 aa23.29■■□□□ 1.32
DDX55-207ENST00000540763 LBX1P52954 281 aa23.29■■□□□ 1.32
DDX55-207ENST00000540763 MFAP1P55081 439 aaKnown RBP23.29■■□□□ 1.32
DDX55-207ENST00000540763 MAP3K9P80192 1104 aa23.29■■□□□ 1.32
DDX55-207ENST00000540763 NMIQ13287 307 aaPredicted RBP23.29■■□□□ 1.32
DDX55-207ENST00000540763 CCDC102AQ96A19 550 aa23.29■■□□□ 1.32
DDX55-207ENST00000540763 FAM227BQ96M60 508 aa23.29■■□□□ 1.32
DDX55-207ENST00000540763 WRNIP1Q96S55 665 aa23.29■■□□□ 1.32
DDX55-207ENST00000540763 MCM9Q9NXL9 1143 aa23.29■■□□□ 1.32
DDX55-207ENST00000540763 ARPP21Q9UBL0 812 aaPredicted RBP23.29■■□□□ 1.32
DDX55-207ENST00000540763 SAP30BPQ9UHR5 308 aaKnown RBP23.29■■□□□ 1.32
DDX55-207ENST00000540763 GSG1L2A8MUP6 293 aa23.28■■□□□ 1.32
DDX55-207ENST00000540763 NOL9Q5SY16 702 aaKnown RBP23.28■■□□□ 1.32
DDX55-207ENST00000540763 PAXIP1Q6ZW49 1069 aaPredicted RBP23.28■■□□□ 1.32
DDX55-207ENST00000540763 MIGA2Q7L4E1 593 aa23.28■■□□□ 1.32
DDX55-207ENST00000540763 AMOTL1Q8IY63 956 aa23.28■■□□□ 1.32
DDX55-207ENST00000540763 FZD1Q9UP38 647 aa23.28■■□□□ 1.32
DDX55-207ENST00000540763 RAD50Q92878 1312 aa23.28■■□□□ 1.32
DDX55-207ENST00000540763 PATL2C9JE40 543 aaKnown RBP23.27■■□□□ 1.32
DDX55-207ENST00000540763 SLC10A3P09131 477 aa23.27■■□□□ 1.32
DDX55-207ENST00000540763 ZNF157P51786 506 aaPredicted RBP23.27■■□□□ 1.32
DDX55-207ENST00000540763 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.27■■□□□ 1.32
DDX55-207ENST00000540763 CAPNS2Q96L46 248 aa23.27■■□□□ 1.32
DDX55-207ENST00000540763 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.27■■□□□ 1.32
DDX55-207ENST00000540763 SERPINB13Q9UIV8 391 aa23.27■■□□□ 1.32
DDX55-207ENST00000540763 CSADQ9Y600 493 aa23.27■■□□□ 1.32
DDX55-207ENST00000540763 CCDC171Q6TFL3 1326 aa23.27■■□□□ 1.32
DDX55-207ENST00000540763 LAMA4Q16363 1823 aa23.26■■□□□ 1.31
DDX55-207ENST00000540763 PHF20L1A8MW92 1017 aa23.26■■□□□ 1.31
DDX55-207ENST00000540763 POLR3DP05423 398 aaPredicted RBP23.26■■□□□ 1.31
DDX55-207ENST00000540763 SBK1Q52WX2 424 aa23.26■■□□□ 1.31
DDX55-207ENST00000540763 SKAP1Q86WV1 359 aa23.26■■□□□ 1.31
DDX55-207ENST00000540763 RASAL3Q86YV0 1011 aa23.26■■□□□ 1.31
DDX55-207ENST00000540763 NACAP1Q9BZK3 213 aa23.26■■□□□ 1.31
DDX55-207ENST00000540763 PHIPQ8WWQ0 1821 aa23.26■■□□□ 1.31
DDX55-207ENST00000540763 FAM155AB1AL88 458 aaPredicted RBP23.25■■□□□ 1.31
DDX55-207ENST00000540763 HSPA8P11142 646 aaKnown RBP23.25■■□□□ 1.31
DDX55-207ENST00000540763 VGLL4Q14135 290 aa23.25■■□□□ 1.31
DDX55-207ENST00000540763 CYP4F22Q6NT55 531 aa23.25■■□□□ 1.31
DDX55-207ENST00000540763 CRACR2BQ8N4Y2 399 aaPredicted RBP23.25■■□□□ 1.31
DDX55-207ENST00000540763 RUFY2Q8WXA3 655 aa23.25■■□□□ 1.31
DDX55-207ENST00000540763 TRIM34Q9BYJ4 488 aa23.25■■□□□ 1.31
DDX55-207ENST00000540763 EPB41L4AQ9HCS5 686 aaPredicted RBP23.25■■□□□ 1.31
DDX55-207ENST00000540763 ZMYM6O95789 1325 aa23.25■■□□□ 1.31
DDX55-207ENST00000540763 ROBO3Q96MS0 1386 aa23.25■■□□□ 1.31
DDX55-207ENST00000540763 CTNND1O60716 968 aaKnown RBP23.24■■□□□ 1.31
DDX55-207ENST00000540763 CHMLP26374 656 aa23.24■■□□□ 1.31
DDX55-207ENST00000540763 GABPAQ06546 454 aa23.24■■□□□ 1.31
DDX55-207ENST00000540763 NOGQ13253 232 aa23.24■■□□□ 1.31
DDX55-207ENST00000540763 GRM1Q13255 1194 aa23.24■■□□□ 1.31
DDX55-207ENST00000540763 C12orf60Q5U649 245 aa23.24■■□□□ 1.31
DDX55-207ENST00000540763 CWC27Q6UX04 472 aaKnown RBP23.24■■□□□ 1.31
DDX55-207ENST00000540763 CCDC129Q6ZRS4 1044 aa23.24■■□□□ 1.31
DDX55-207ENST00000540763 IFNL3Q8IZI9 196 aa23.24■■□□□ 1.31
DDX55-207ENST00000540763 SLC10A4Q96EP9 437 aa23.24■■□□□ 1.31
DDX55-207ENST00000540763 DNAJC18Q9H819 358 aa23.24■■□□□ 1.31
DDX55-207ENST00000540763 SNCAIPQ9Y6H5 919 aa23.24■■□□□ 1.31
DDX55-207ENST00000540763 USP17L12C9JPN9 530 aa23.23■■□□□ 1.31
DDX55-207ENST00000540763 USP17L21D6R901 530 aa23.23■■□□□ 1.31
DDX55-207ENST00000540763 ZBTB48P10074 688 aaPredicted RBP23.23■■□□□ 1.31
DDX55-207ENST00000540763 INPP5BP32019 993 aa23.23■■□□□ 1.31
DDX55-207ENST00000540763 PLCD1P51178 756 aa23.23■■□□□ 1.31
DDX55-207ENST00000540763 CTR9Q6PD62 1173 aa23.23■■□□□ 1.31
DDX55-207ENST00000540763 ZNF589Q86UQ0 364 aaPredicted RBP23.23■■□□□ 1.31
DDX55-207ENST00000540763 CLMNQ96JQ2 1002 aa23.23■■□□□ 1.31
DDX55-207ENST00000540763 BEGAINQ9BUH8 593 aa23.23■■□□□ 1.31
DDX55-207ENST00000540763 GINM1Q9NU53 330 aa23.23■■□□□ 1.31
DDX55-207ENST00000540763 SWAP70Q9UH65 585 aa23.23■■□□□ 1.31
DDX55-207ENST00000540763 PTPRFP10586 1907 aa23.22■■□□□ 1.31
DDX55-207ENST00000540763 FOXP2O15409 715 aa23.22■■□□□ 1.31
DDX55-207ENST00000540763 APPP05067 770 aa23.22■■□□□ 1.31
DDX55-207ENST00000540763 MAP2K2P36507 400 aa23.22■■□□□ 1.31
DDX55-207ENST00000540763 TDO2P48775 406 aa23.22■■□□□ 1.31
DDX55-207ENST00000540763 ALX1Q15699 326 aa23.22■■□□□ 1.31
DDX55-207ENST00000540763 TATDN1Q6P1N9 297 aa23.22■■□□□ 1.31
DDX55-207ENST00000540763 SCYL3Q8IZE3 742 aa23.22■■□□□ 1.31
DDX55-207ENST00000540763 NAPBQ9H115 298 aa23.22■■□□□ 1.31
DDX55-207ENST00000540763 SPDYE5A6NIY4 337 aa23.21■■□□□ 1.31
DDX55-207ENST00000540763 FAM196BA6NMK8 535 aa23.21■■□□□ 1.31
DDX55-207ENST00000540763 CAP2P40123 477 aa23.21■■□□□ 1.31
DDX55-207ENST00000540763 ERO1BQ86YB8 467 aa23.21■■□□□ 1.31
DDX55-207ENST00000540763 ZKSCAN4Q969J2 545 aaPredicted RBP23.21■■□□□ 1.31
DDX55-207ENST00000540763 WNK4Q96J92 1243 aa23.21■■□□□ 1.31
DDX55-207ENST00000540763 HSPD1P10809 573 aaKnown RBP23.2■■□□□ 1.3
DDX55-207ENST00000540763 SLC4A8Q2Y0W8 1093 aa23.2■■□□□ 1.3
DDX55-207ENST00000540763 SPRYD7Q5W111 196 aa23.2■■□□□ 1.3
DDX55-207ENST00000540763 REM2Q8IYK8 340 aaPredicted RBP23.2■■□□□ 1.3
DDX55-207ENST00000540763 ELP3Q9H9T3 547 aa23.2■■□□□ 1.3
DDX55-207ENST00000540763 SLURP2P0DP57 97 aa23.19■■□□□ 1.3
DDX55-207ENST00000540763 CYP2D6P10635 497 aa23.19■■□□□ 1.3
DDX55-207ENST00000540763 PPATQ06203 517 aa23.19■■□□□ 1.3
DDX55-207ENST00000540763 VPS53Q5VIR6 699 aa23.19■■□□□ 1.3
DDX55-207ENST00000540763 C16orf86Q6ZW13 317 aa23.19■■□□□ 1.3
DDX55-207ENST00000540763 DSCC1Q9BVC3 393 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms