RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 ZNF592Q92610 1267 aa13.32□□□□□ -0.28
C11orf54-214ENST00000540113 CELF1Q92879 486 aaKnown RBP13.32□□□□□ -0.28
C11orf54-214ENST00000540113 MAP3K14Q99558 947 aa13.32□□□□□ -0.28
C11orf54-214ENST00000540113 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.32□□□□□ -0.28
C11orf54-214ENST00000540113 SMC2O95347 1197 aa13.32□□□□□ -0.28
C11orf54-214ENST00000540113 ATP2B1P20020 1258 aa13.32□□□□□ -0.28
C11orf54-214ENST00000540113 SYKP43405 635 aa13.32□□□□□ -0.28
C11orf54-214ENST00000540113 TRIM29Q14134 588 aa13.32□□□□□ -0.28
C11orf54-214ENST00000540113 CPLX2Q6PUV4 134 aaKnown RBP13.32□□□□□ -0.28
C11orf54-214ENST00000540113 SGMS1Q86VZ5 419 aa13.32□□□□□ -0.28
C11orf54-214ENST00000540113 UBE2Q2Q8WVN8 375 aa13.32□□□□□ -0.28
C11orf54-214ENST00000540113 TRMT1Q9NXH9 659 aaKnown RBP13.32□□□□□ -0.28
C11orf54-214ENST00000540113 hCG_1642624A0A1W2PR95 340 aa13.31□□□□□ -0.28
C11orf54-214ENST00000540113 FOXN1O15353 648 aa13.31□□□□□ -0.28
C11orf54-214ENST00000540113 TNNT1P13805 278 aa13.31□□□□□ -0.28
C11orf54-214ENST00000540113 EVX2Q03828 476 aa13.31□□□□□ -0.28
C11orf54-214ENST00000540113 GRIN1Q05586 938 aa13.31□□□□□ -0.28
C11orf54-214ENST00000540113 AMIGO3Q86WK7 504 aa13.31□□□□□ -0.28
C11orf54-214ENST00000540113 XPO4Q9C0E2 1151 aaKnown RBP13.31□□□□□ -0.28
C11orf54-214ENST00000540113 NAT10Q9H0A0 1025 aaKnown RBP13.31□□□□□ -0.28
C11orf54-214ENST00000540113 BSDC1Q9NW68 430 aaPredicted RBP13.31□□□□□ -0.28
C11orf54-214ENST00000540113 RAI14Q9P0K7 980 aa13.31□□□□□ -0.28
C11orf54-214ENST00000540113 IFNKQ9P0W0 207 aa13.31□□□□□ -0.28
C11orf54-214ENST00000540113 MINPP1Q9UNW1 487 aa13.31□□□□□ -0.28
C11orf54-214ENST00000540113 ONECUT3O60422 494 aaPredicted RBP13.31□□□□□ -0.28
C11orf54-214ENST00000540113 SKILP12757 684 aa13.31□□□□□ -0.28
C11orf54-214ENST00000540113 LMOD1P29536 600 aaPredicted RBP13.31□□□□□ -0.28
C11orf54-214ENST00000540113 DYNLL1P63167 89 aaKnown RBP13.31□□□□□ -0.28
C11orf54-214ENST00000540113 CHAF1AQ13111 956 aaPredicted RBP13.31□□□□□ -0.28
C11orf54-214ENST00000540113 WTAPQ15007 396 aa13.31□□□□□ -0.28
C11orf54-214ENST00000540113 SLC10A5Q5PT55 438 aa13.31□□□□□ -0.28
C11orf54-214ENST00000540113 TRPC5Q9UL62 973 aaPredicted RBP13.31□□□□□ -0.28
C11orf54-214ENST00000540113 PRDM1O75626 825 aa13.3□□□□□ -0.28
C11orf54-214ENST00000540113 KLRK1P26718 216 aa13.3□□□□□ -0.28
C11orf54-214ENST00000540113 NLRP12P59046 1061 aa13.3□□□□□ -0.28
C11orf54-214ENST00000540113 NR5A1Q13285 461 aa13.3□□□□□ -0.28
C11orf54-214ENST00000540113 UBE4AQ14139 1066 aa13.3□□□□□ -0.28
C11orf54-214ENST00000540113 FAM182BQ5T319 152 aa13.3□□□□□ -0.28
C11orf54-214ENST00000540113 STAG1Q8WVM7 1258 aa13.3□□□□□ -0.28
C11orf54-214ENST00000540113 TAF1LQ8IZX4 1826 aa13.3□□□□□ -0.28
C11orf54-214ENST00000540113 FMNL1O95466 1100 aaPredicted RBP13.3□□□□□ -0.28
C11orf54-214ENST00000540113 ATP1A3P13637 1013 aa13.3□□□□□ -0.28
C11orf54-214ENST00000540113 GNAT2P19087 354 aa13.3□□□□□ -0.28
C11orf54-214ENST00000540113 GTF2F1P35269 517 aaKnown RBP eCLIP13.3□□□□□ -0.28
C11orf54-214ENST00000540113 LIFRP42702 1097 aa13.3□□□□□ -0.28
C11orf54-214ENST00000540113 CCZ1BP86790 482 aa13.3□□□□□ -0.28
C11orf54-214ENST00000540113 CCZ1P86791 482 aaPredicted RBP13.3□□□□□ -0.28
C11orf54-214ENST00000540113 NAA30Q147X3 362 aaPredicted RBP13.3□□□□□ -0.28
C11orf54-214ENST00000540113 LONRF3Q496Y0 759 aa13.3□□□□□ -0.28
C11orf54-214ENST00000540113 OXER1Q8TDS5 423 aa13.3□□□□□ -0.28
C11orf54-214ENST00000540113 ZNF384Q8TF68 577 aa13.3□□□□□ -0.28
C11orf54-214ENST00000540113 KRT23Q9C075 422 aa13.3□□□□□ -0.28
C11orf54-214ENST00000540113 NARFQ9UHQ1 456 aa13.3□□□□□ -0.28
C11orf54-214ENST00000540113 TNRC6CQ9HCJ0 1690 aaKnown RBP13.3□□□□□ -0.28
C11orf54-214ENST00000540113 MYH13Q9UKX3 1938 aa13.29□□□□□ -0.28
C11orf54-214ENST00000540113 RPS6KA4O75676 772 aa13.29□□□□□ -0.28
C11orf54-214ENST00000540113 U2AF2P26368 475 aaKnown RBP eCLIP13.29□□□□□ -0.288e-9■■■■□ 20.1
C11orf54-214ENST00000540113 TOB1P50616 345 aaPredicted RBP13.29□□□□□ -0.28
C11orf54-214ENST00000540113 PPARAQ07869 468 aa13.29□□□□□ -0.28
C11orf54-214ENST00000540113 NCAPHQ15003 741 aa13.29□□□□□ -0.28
C11orf54-214ENST00000540113 RTN1Q16799 776 aa13.29□□□□□ -0.28
C11orf54-214ENST00000540113 HSP90AA4PQ58FG1 418 aa13.29□□□□□ -0.28
C11orf54-214ENST00000540113 TMC6Q7Z403 805 aa13.29□□□□□ -0.28
C11orf54-214ENST00000540113 DIS3L2Q8IYB7 885 aaKnown RBP13.29□□□□□ -0.28
C11orf54-214ENST00000540113 FAM84BQ96KN1 310 aaPredicted RBP13.29□□□□□ -0.28
C11orf54-214ENST00000540113 NACAP1Q9BZK3 213 aa13.29□□□□□ -0.28
C11orf54-214ENST00000540113 NID2Q14112 1375 aa13.29□□□□□ -0.28
C11orf54-214ENST00000540113 BAZ2AQ9UIF9 1905 aaKnown RBP13.29□□□□□ -0.28
C11orf54-214ENST00000540113 RGL2O15211 777 aa13.29□□□□□ -0.28
C11orf54-214ENST00000540113 RC3H1Q5TC82 1133 aaKnown RBP13.29□□□□□ -0.28
C11orf54-214ENST00000540113 RIOK1Q9BRS2 568 aaKnown RBP13.29□□□□□ -0.28
C11orf54-214ENST00000540113 CNNM2Q9H8M5 875 aa13.29□□□□□ -0.28
C11orf54-214ENST00000540113 JAG2Q9Y219 1238 aa13.29□□□□□ -0.28
C11orf54-214ENST00000540113 LY75O60449 1722 aa13.28□□□□□ -0.28
C11orf54-214ENST00000540113 FAM205CA6NFA0 338 aa13.28□□□□□ -0.28
C11orf54-214ENST00000540113 GNPATO15228 680 aa13.28□□□□□ -0.28
C11orf54-214ENST00000540113 SLC4A8Q2Y0W8 1093 aa13.28□□□□□ -0.28
C11orf54-214ENST00000540113 METTL16Q86W50 562 aaKnown RBP13.28□□□□□ -0.28
C11orf54-214ENST00000540113 FOXP4Q8IVH2 680 aaPredicted RBP13.28□□□□□ -0.28
C11orf54-214ENST00000540113 HPSEQ9Y251 543 aa13.28□□□□□ -0.28
C11orf54-214ENST00000540113 MAGEB6P1A0A0J9YX57 407 aa13.28□□□□□ -0.28
C11orf54-214ENST00000540113 PPP6R2O75170 966 aa13.28□□□□□ -0.28
C11orf54-214ENST00000540113 MMP1P03956 469 aa13.28□□□□□ -0.28
C11orf54-214ENST00000540113 IFNAR1P17181 557 aa13.28□□□□□ -0.28
C11orf54-214ENST00000540113 GTF2E1P29083 439 aaPredicted RBP13.28□□□□□ -0.28
C11orf54-214ENST00000540113 RESP18Q5W5W9 173 aa13.28□□□□□ -0.28
C11orf54-214ENST00000540113 SLC51AQ86UW1 340 aa13.28□□□□□ -0.28
C11orf54-214ENST00000540113 NOSTRINQ8IVI9 506 aa13.28□□□□□ -0.28
C11orf54-214ENST00000540113 ZNF654Q8IZM8 581 aa13.28□□□□□ -0.28
C11orf54-214ENST00000540113 RGS22Q8NE09 1264 aa13.28□□□□□ -0.28
C11orf54-214ENST00000540113 DPF2Q92785 391 aa13.28□□□□□ -0.28
C11orf54-214ENST00000540113 SHISA4Q96DD7 197 aa13.28□□□□□ -0.28
C11orf54-214ENST00000540113 PCDHB6Q9Y5E3 794 aa13.28□□□□□ -0.28
C11orf54-214ENST00000540113 DUOX1Q9NRD9 1551 aa13.27□□□□□ -0.28
C11orf54-214ENST00000540113 ERICH2A1L162 156 aa13.27□□□□□ -0.29
C11orf54-214ENST00000540113 HOMEZQ8IX15 550 aa13.27□□□□□ -0.29
C11orf54-214ENST00000540113 GRAMD1CQ8IYS0 662 aa13.27□□□□□ -0.29
C11orf54-214ENST00000540113 HSD3B7Q9H2F3 369 aa13.27□□□□□ -0.29
C11orf54-214ENST00000540113 GNL3LQ9NVN8 582 aaKnown RBP13.27□□□□□ -0.29
C11orf54-214ENST00000540113 TNKSO95271 1327 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms