RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 PTPDC1A2A3K4 754 aa19.94■□□□□ 0.78
PCDHB17P-201ENST00000539533 TGFBRAP1Q8WUH2 860 aa19.94■□□□□ 0.78
PCDHB17P-201ENST00000539533 PDCP20941 246 aa19.94■□□□□ 0.78
PCDHB17P-201ENST00000539533 CDC37L1Q7L3B6 337 aa19.94■□□□□ 0.78
PCDHB17P-201ENST00000539533 PTMAP06454 111 aaKnown RBP19.93■□□□□ 0.78
PCDHB17P-201ENST00000539533 RXRAP19793 462 aa19.93■□□□□ 0.78
PCDHB17P-201ENST00000539533 FAM163AQ96GL9 167 aaPredicted RBP19.93■□□□□ 0.78
PCDHB17P-201ENST00000539533 ATF5Q9Y2D1 282 aaPredicted RBP19.93■□□□□ 0.78
PCDHB17P-201ENST00000539533 DPEP1P16444 411 aa19.93■□□□□ 0.78
PCDHB17P-201ENST00000539533 KCNA3P22001 575 aa19.93■□□□□ 0.78
PCDHB17P-201ENST00000539533 LIFRP42702 1097 aa19.93■□□□□ 0.78
PCDHB17P-201ENST00000539533 SBK1Q52WX2 424 aa19.93■□□□□ 0.78
PCDHB17P-201ENST00000539533 APOA5Q6Q788 366 aa19.93■□□□□ 0.78
PCDHB17P-201ENST00000539533 NFXL1Q6ZNB6 911 aa19.93■□□□□ 0.78
PCDHB17P-201ENST00000539533 PODNQ7Z5L7 613 aa19.93■□□□□ 0.78
PCDHB17P-201ENST00000539533 ARPP21Q9UBL0 812 aaPredicted RBP19.93■□□□□ 0.78
PCDHB17P-201ENST00000539533 FGRP09769 529 aa19.92■□□□□ 0.78
PCDHB17P-201ENST00000539533 SGMS1Q86VZ5 419 aa19.92■□□□□ 0.78
PCDHB17P-201ENST00000539533 TTLL6Q8N841 843 aa19.92■□□□□ 0.78
PCDHB17P-201ENST00000539533 FAM184AQ8NB25 1140 aa19.92■□□□□ 0.78
PCDHB17P-201ENST00000539533 ESR2Q92731 530 aa19.92■□□□□ 0.78
PCDHB17P-201ENST00000539533 MYL10Q9BUA6 226 aa19.92■□□□□ 0.78
PCDHB17P-201ENST00000539533 GAKO14976 1311 aa19.92■□□□□ 0.78
PCDHB17P-201ENST00000539533 SNED1Q8TER0 1413 aa19.92■□□□□ 0.78
PCDHB17P-201ENST00000539533 RANBP6O60518 1105 aaKnown RBP19.92■□□□□ 0.78
PCDHB17P-201ENST00000539533 AOC3Q16853 763 aa19.92■□□□□ 0.78
PCDHB17P-201ENST00000539533 FERMT3Q86UX7 667 aa19.92■□□□□ 0.78
PCDHB17P-201ENST00000539533 MAPKAPK5Q8IW41 473 aa19.92■□□□□ 0.78
PCDHB17P-201ENST00000539533 SLF2Q8IX21 1173 aa19.92■□□□□ 0.78
PCDHB17P-201ENST00000539533 TMEM87AQ8NBN3 555 aa19.92■□□□□ 0.78
PCDHB17P-201ENST00000539533 TTF2Q9UNY4 1162 aaKnown RBP19.92■□□□□ 0.78
PCDHB17P-201ENST00000539533 RHBDL3P58872 404 aa19.91■□□□□ 0.78
PCDHB17P-201ENST00000539533 DAGLAQ9Y4D2 1042 aa19.91■□□□□ 0.78
PCDHB17P-201ENST00000539533 ECE2O60344 883 aa19.91■□□□□ 0.78
PCDHB17P-201ENST00000539533 FDPSP14324 419 aaKnown RBP19.91■□□□□ 0.78
PCDHB17P-201ENST00000539533 ADD1P35611 737 aaKnown RBP19.91■□□□□ 0.78
PCDHB17P-201ENST00000539533 HMGN5P82970 282 aaKnown RBP19.91■□□□□ 0.78
PCDHB17P-201ENST00000539533 MICU3Q86XE3 530 aa19.91■□□□□ 0.78
PCDHB17P-201ENST00000539533 CCDC144CPQ8IYA2 1237 aa19.91■□□□□ 0.78
PCDHB17P-201ENST00000539533 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.91■□□□□ 0.78
PCDHB17P-201ENST00000539533 WTAPQ15007 396 aa19.9■□□□□ 0.78
PCDHB17P-201ENST00000539533 SART3Q15020 963 aaKnown RBP19.9■□□□□ 0.78
PCDHB17P-201ENST00000539533 C12orf60Q5U649 245 aa19.9■□□□□ 0.78
PCDHB17P-201ENST00000539533 SASS6Q6UVJ0 657 aa19.9■□□□□ 0.78
PCDHB17P-201ENST00000539533 TEX11Q8IYF3 940 aa19.9■□□□□ 0.78
PCDHB17P-201ENST00000539533 SUGT1Q9Y2Z0 365 aa19.9■□□□□ 0.78
PCDHB17P-201ENST00000539533 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.9■□□□□ 0.78
PCDHB17P-201ENST00000539533 CCDC69A6NI79 296 aa19.9■□□□□ 0.78
PCDHB17P-201ENST00000539533 ZBTB43O43298 467 aa19.9■□□□□ 0.78
PCDHB17P-201ENST00000539533 METAP2P50579 478 aaKnown RBP eCLIP19.9■□□□□ 0.78
PCDHB17P-201ENST00000539533 SCNN1DP51172 638 aa19.9■□□□□ 0.78
PCDHB17P-201ENST00000539533 FOSBP53539 338 aa19.9■□□□□ 0.78
PCDHB17P-201ENST00000539533 CC2D2BQ6DHV5 1058 aa19.9■□□□□ 0.78
PCDHB17P-201ENST00000539533 ARID3AQ99856 593 aa19.9■□□□□ 0.78
PCDHB17P-201ENST00000539533 UBAC1Q9BSL1 405 aa19.9■□□□□ 0.78
PCDHB17P-201ENST00000539533 SAP30BPQ9UHR5 308 aaKnown RBP19.9■□□□□ 0.78
PCDHB17P-201ENST00000539533 TCHHQ07283 1943 aa19.89■□□□□ 0.77
PCDHB17P-201ENST00000539533 DHX16O60231 1041 aaKnown RBP19.89■□□□□ 0.77
PCDHB17P-201ENST00000539533 PDIA4P13667 645 aaKnown RBP19.89■□□□□ 0.77
PCDHB17P-201ENST00000539533 CDC27P30260 824 aa19.89■□□□□ 0.77
PCDHB17P-201ENST00000539533 KIAA2012Q0VF49 1180 aa19.89■□□□□ 0.77
PCDHB17P-201ENST00000539533 CHMP4CQ96CF2 233 aa19.89■□□□□ 0.77
PCDHB17P-201ENST00000539533 SLC12A7Q9Y666 1083 aa19.89■□□□□ 0.77
PCDHB17P-201ENST00000539533 LAMB1P07942 1786 aa19.89■□□□□ 0.77
PCDHB17P-201ENST00000539533 ERICH2A1L162 156 aa19.88■□□□□ 0.77
PCDHB17P-201ENST00000539533 CPLX1O14810 134 aa19.88■□□□□ 0.77
PCDHB17P-201ENST00000539533 PCP11498 1178 aaKnown RBP19.88■□□□□ 0.77
PCDHB17P-201ENST00000539533 R3HDM1Q15032 1099 aaKnown RBP19.88■□□□□ 0.77
PCDHB17P-201ENST00000539533 UVSSAQ2YD98 709 aa19.88■□□□□ 0.77
PCDHB17P-201ENST00000539533 CCDC183Q5T5S1 534 aa19.88■□□□□ 0.77
PCDHB17P-201ENST00000539533 DYNLL2Q96FJ2 89 aa19.88■□□□□ 0.77
PCDHB17P-201ENST00000539533 MTA3Q9BTC8 594 aa19.88■□□□□ 0.77
PCDHB17P-201ENST00000539533 TNKSO95271 1327 aa19.88■□□□□ 0.77
PCDHB17P-201ENST00000539533 DLEC1Q9Y238 1755 aa19.88■□□□□ 0.77
PCDHB17P-201ENST00000539533 DYNC1I1O14576 645 aa19.88■□□□□ 0.77
PCDHB17P-201ENST00000539533 SLC3A2P08195 630 aaKnown RBP19.88■□□□□ 0.77
PCDHB17P-201ENST00000539533 PLCD1P51178 756 aa19.88■□□□□ 0.77
PCDHB17P-201ENST00000539533 FAM47AQ5JRC9 791 aa19.88■□□□□ 0.77
PCDHB17P-201ENST00000539533 ILDR1Q86SU0 546 aaPredicted RBP19.88■□□□□ 0.77
PCDHB17P-201ENST00000539533 CERS3Q8IU89 383 aa19.88■□□□□ 0.77
PCDHB17P-201ENST00000539533 CNPY2Q9Y2B0 182 aa19.88■□□□□ 0.77
PCDHB17P-201ENST00000539533 SCN9AQ15858 1988 aa19.88■□□□□ 0.77
PCDHB17P-201ENST00000539533 H3BQV1 296 aa19.87■□□□□ 0.77
PCDHB17P-201ENST00000539533 ORC4O43929 436 aa19.87■□□□□ 0.77
PCDHB17P-201ENST00000539533 PLCG2P16885 1265 aa19.87■□□□□ 0.77
PCDHB17P-201ENST00000539533 SEC23AQ15436 765 aa19.87■□□□□ 0.77
PCDHB17P-201ENST00000539533 IFFO2Q5TF58 517 aa19.87■□□□□ 0.77
PCDHB17P-201ENST00000539533 FAM173BQ6P4H8 233 aa19.87■□□□□ 0.77
PCDHB17P-201ENST00000539533 ZSCAN10Q96SZ4 725 aaPredicted RBP19.87■□□□□ 0.77
PCDHB17P-201ENST00000539533 FAM217BQ9NTX9 383 aaPredicted RBP19.87■□□□□ 0.77
PCDHB17P-201ENST00000539533 ATP6V1DQ9Y5K8 247 aa19.87■□□□□ 0.77
PCDHB17P-201ENST00000539533 CDK5RAP2Q96SN8 1893 aa19.87■□□□□ 0.77
PCDHB17P-201ENST00000539533 DNM1Q05193 864 aaKnown RBP19.87■□□□□ 0.77
PCDHB17P-201ENST00000539533 PDE4BQ07343 736 aa19.87■□□□□ 0.77
PCDHB17P-201ENST00000539533 ENAHQ8N8S7 591 aaPredicted RBP19.87■□□□□ 0.77
PCDHB17P-201ENST00000539533 PPIP5K2O43314 1243 aa19.86■□□□□ 0.77
PCDHB17P-201ENST00000539533 DACT2Q5SW24 774 aa19.86■□□□□ 0.77
PCDHB17P-201ENST00000539533 STRIP1Q5VSL9 837 aa19.86■□□□□ 0.77
PCDHB17P-201ENST00000539533 MTERF4Q7Z6M4 381 aaKnown RBP19.86■□□□□ 0.77
PCDHB17P-201ENST00000539533 MTFR1LQ9H019 292 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms