RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 GJD3Q8N144 294 aa4.23□□□□□ -1.73
CBX3P4-201ENST00000538909 RNF214Q8ND24 703 aa4.23□□□□□ -1.73
CBX3P4-201ENST00000538909 FOXQ1Q9C009 403 aa4.23□□□□□ -1.73
CBX3P4-201ENST00000538909 TMPRSS5Q9H3S3 457 aa4.23□□□□□ -1.73
CBX3P4-201ENST00000538909 KRT82Q9NSB4 513 aa4.23□□□□□ -1.73
CBX3P4-201ENST00000538909 CSADQ9Y600 493 aa4.23□□□□□ -1.73
CBX3P4-201ENST00000538909 NISCHQ9Y2I1 1504 aa4.22□□□□□ -1.73
CBX3P4-201ENST00000538909 PRR33A8MZF0 331 aa4.22□□□□□ -1.73
CBX3P4-201ENST00000538909 ERVFC1P60507 584 aa4.22□□□□□ -1.73
CBX3P4-201ENST00000538909 SKOR2Q2VWA4 1001 aaPredicted RBP4.22□□□□□ -1.73
CBX3P4-201ENST00000538909 KCNC2Q96PR1 638 aa4.22□□□□□ -1.73
CBX3P4-201ENST00000538909 ALPK1Q96QP1 1244 aa4.22□□□□□ -1.73
CBX3P4-201ENST00000538909 PRDM5Q9NQX1 630 aaPredicted RBP4.22□□□□□ -1.73
CBX3P4-201ENST00000538909 SEMA3GQ9NS98 782 aa4.22□□□□□ -1.73
CBX3P4-201ENST00000538909 EOMESO95936 686 aa4.21□□□□□ -1.74
CBX3P4-201ENST00000538909 HK2P52789 917 aa4.21□□□□□ -1.74
CBX3P4-201ENST00000538909 SRPK2P78362 688 aaKnown RBP4.21□□□□□ -1.74
CBX3P4-201ENST00000538909 ZC3H12AQ5D1E8 599 aaKnown RBP4.21□□□□□ -1.74
CBX3P4-201ENST00000538909 PPM1JQ5JR12 505 aa4.21□□□□□ -1.74
CBX3P4-201ENST00000538909 MYLIPQ8WY64 445 aa4.21□□□□□ -1.74
CBX3P4-201ENST00000538909 ABCB6Q9NP58 842 aa4.21□□□□□ -1.74
CBX3P4-201ENST00000538909 NPHS2Q9NP85 383 aa4.21□□□□□ -1.74
CBX3P4-201ENST00000538909 PICK1Q9NRD5 415 aa4.21□□□□□ -1.74
CBX3P4-201ENST00000538909 GPN3Q9UHW5 284 aaPredicted RBP4.21□□□□□ -1.74
CBX3P4-201ENST00000538909 DNAJC25-GNG10A0A024R161 153 aa4.2□□□□□ -1.74
CBX3P4-201ENST00000538909 PSPNO60542 156 aa4.2□□□□□ -1.74
CBX3P4-201ENST00000538909 TRIM13O60858 407 aa4.2□□□□□ -1.74
CBX3P4-201ENST00000538909 FAM13AO94988 1023 aa4.2□□□□□ -1.74
CBX3P4-201ENST00000538909 TRHRP34981 398 aaPredicted RBP4.2□□□□□ -1.74
CBX3P4-201ENST00000538909 ERVK-24P63145 666 aa4.2□□□□□ -1.74
CBX3P4-201ENST00000538909 FGD1P98174 961 aa4.2□□□□□ -1.74
CBX3P4-201ENST00000538909 NFKB2Q00653 900 aa4.2□□□□□ -1.74
CBX3P4-201ENST00000538909 KRTAP1-1Q07627 177 aa4.2□□□□□ -1.74
CBX3P4-201ENST00000538909 MAP1SQ66K74 1059 aaPredicted RBP4.2□□□□□ -1.74
CBX3P4-201ENST00000538909 MARCH10Q8NA82 808 aaPredicted RBP4.2□□□□□ -1.74
CBX3P4-201ENST00000538909 BAHD1Q8TBE0 780 aaPredicted RBP4.2□□□□□ -1.74
CBX3P4-201ENST00000538909 CCDC120Q96HB5 630 aa4.2□□□□□ -1.74
CBX3P4-201ENST00000538909 DNAJC25Q9H1X3 360 aa4.2□□□□□ -1.74
CBX3P4-201ENST00000538909 RTEL1Q9NZ71 1219 aa4.2□□□□□ -1.74
CBX3P4-201ENST00000538909 CNOT6Q9ULM6 557 aaKnown RBP4.2□□□□□ -1.74
CBX3P4-201ENST00000538909 TMEM238LA0A1B0GVL6 79 aa4.19□□□□□ -1.74
CBX3P4-201ENST00000538909 RBAK-RBAKDNI3L0D1 243 aa4.19□□□□□ -1.74
CBX3P4-201ENST00000538909 GADD45BO75293 160 aaPredicted RBP4.19□□□□□ -1.74
CBX3P4-201ENST00000538909 DLG4P78352 724 aa4.19□□□□□ -1.74
CBX3P4-201ENST00000538909 PTPN12Q05209 780 aaKnown RBP4.19□□□□□ -1.74
CBX3P4-201ENST00000538909 RPS26P11Q5JNZ5 115 aaPredicted RBP4.19□□□□□ -1.74
CBX3P4-201ENST00000538909 RALGPS1Q5JS13 557 aa4.19□□□□□ -1.74
CBX3P4-201ENST00000538909 TCERG1LQ5VWI1 586 aa4.19□□□□□ -1.74
CBX3P4-201ENST00000538909 PDZD3Q86UT5 571 aa4.19□□□□□ -1.74
CBX3P4-201ENST00000538909 MFSD4AQ8N468 514 aa4.19□□□□□ -1.74
CBX3P4-201ENST00000538909 STK35Q8TDR2 534 aa4.19□□□□□ -1.74
CBX3P4-201ENST00000538909 ACSBG1Q96GR2 724 aa4.19□□□□□ -1.74
CBX3P4-201ENST00000538909 MCOLN1Q9GZU1 580 aa4.19□□□□□ -1.74
CBX3P4-201ENST00000538909 ANO2Q9NQ90 1003 aa4.19□□□□□ -1.74
CBX3P4-201ENST00000538909 TPX2Q9ULW0 747 aaKnown RBP4.19□□□□□ -1.74
CBX3P4-201ENST00000538909 MAPK8IP1Q9UQF2 711 aa4.19□□□□□ -1.74
CBX3P4-201ENST00000538909 DCDC2CA8MYV0 355 aa4.18□□□□□ -1.74
CBX3P4-201ENST00000538909 CELA3BP08861 270 aa4.18□□□□□ -1.74
CBX3P4-201ENST00000538909 NPR3P17342 541 aa4.18□□□□□ -1.74
CBX3P4-201ENST00000538909 ARMCX6Q7L4S7 300 aa4.18□□□□□ -1.74
CBX3P4-201ENST00000538909 ZNF605Q86T29 641 aa4.18□□□□□ -1.74
CBX3P4-201ENST00000538909 SULF2Q8IWU5 870 aa4.18□□□□□ -1.74
CBX3P4-201ENST00000538909 CXorf38Q8TB03 319 aa4.18□□□□□ -1.74
CBX3P4-201ENST00000538909 GPBAR1Q8TDU6 330 aa4.18□□□□□ -1.74
CBX3P4-201ENST00000538909 UBE2FQ969M7 185 aa4.18□□□□□ -1.74
CBX3P4-201ENST00000538909 RNF32Q9H0A6 362 aa4.18□□□□□ -1.74
CBX3P4-201ENST00000538909 ADRB1P08588 477 aa4.17□□□□□ -1.74
CBX3P4-201ENST00000538909 SRFP11831 508 aa4.17□□□□□ -1.74
CBX3P4-201ENST00000538909 NTF4P34130 210 aa4.17□□□□□ -1.74
CBX3P4-201ENST00000538909 PPP2R3AQ06190 1150 aa4.17□□□□□ -1.74
CBX3P4-201ENST00000538909 ORC1Q13415 861 aa4.17□□□□□ -1.74
CBX3P4-201ENST00000538909 TMEM132EQ6IEE7 984 aa4.17□□□□□ -1.74
CBX3P4-201ENST00000538909 PRPF40BQ6NWY9 871 aaKnown RBP4.17□□□□□ -1.74
CBX3P4-201ENST00000538909 CDC37L1Q7L3B6 337 aa4.17□□□□□ -1.74
CBX3P4-201ENST00000538909 C12orf40Q86WS4 652 aa4.17□□□□□ -1.74
CBX3P4-201ENST00000538909 SGPP1Q9BX95 441 aa4.17□□□□□ -1.74
CBX3P4-201ENST00000538909 TMEM39AQ9NV64 488 aa4.17□□□□□ -1.74
CBX3P4-201ENST00000538909 ZSWIM5Q9P217 1185 aa4.17□□□□□ -1.74
CBX3P4-201ENST00000538909 KCTD3Q9Y597 815 aa4.17□□□□□ -1.74
CBX3P4-201ENST00000538909 MYOCOSA0A1B0GUC4 107 aa4.16□□□□□ -1.74
CBX3P4-201ENST00000538909 OTOL1A6NHN0 477 aaPredicted RBP4.16□□□□□ -1.74
CBX3P4-201ENST00000538909 SLITRK5O94991 958 aa4.16□□□□□ -1.74
CBX3P4-201ENST00000538909 CBX7O95931 251 aa4.16□□□□□ -1.74
CBX3P4-201ENST00000538909 ABL1P00519 1130 aa4.16□□□□□ -1.74
CBX3P4-201ENST00000538909 ZNF211Q13398 564 aaPredicted RBP4.16□□□□□ -1.74
CBX3P4-201ENST00000538909 ZNF385BQ569K4 471 aa4.16□□□□□ -1.74
CBX3P4-201ENST00000538909 SFRP5Q5T4F7 317 aa4.16□□□□□ -1.74
CBX3P4-201ENST00000538909 MPRIPQ6WCQ1 1025 aa4.16□□□□□ -1.74
CBX3P4-201ENST00000538909 DTHD1Q6ZMT9 781 aa4.16□□□□□ -1.74
CBX3P4-201ENST00000538909 BORCS6Q96GS4 357 aa4.16□□□□□ -1.74
CBX3P4-201ENST00000538909 XYLT2Q9H1B5 865 aa4.16□□□□□ -1.74
CBX3P4-201ENST00000538909 C19orf44Q9H6X5 657 aa4.16□□□□□ -1.74
CBX3P4-201ENST00000538909 CBX8Q9HC52 389 aa4.16□□□□□ -1.74
CBX3P4-201ENST00000538909 TMEM59LQ9UK28 342 aa4.16□□□□□ -1.74
CBX3P4-201ENST00000538909 ST14Q9Y5Y6 855 aa4.16□□□□□ -1.74
CBX3P4-201ENST00000538909 CAPN6Q9Y6Q1 641 aa4.16□□□□□ -1.74
CBX3P4-201ENST00000538909 RFXAPO00287 272 aa4.15□□□□□ -1.75
CBX3P4-201ENST00000538909 CPNE3O75131 537 aaKnown RBP4.15□□□□□ -1.75
CBX3P4-201ENST00000538909 SASH1O94885 1247 aa4.15□□□□□ -1.75
CBX3P4-201ENST00000538909 HPXP02790 462 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms