RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 USP5P45974 858 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 FXR1P51114 621 aaKnown RBP eCLIP6.65□□□□□ -1.343e-7■■■□□ 18.9
CHD4-206ENST00000536999 RCAN1P53805 252 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 SIK1P57059 783 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 FANCCQ00597 558 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 SPAG1Q07617 926 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 ZSCAN26Q16670 478 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 TSR1Q2NL82 804 aaKnown RBP6.65□□□□□ -1.34
CHD4-206ENST00000536999 CFAP100Q494V2 611 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 TSHZ3Q63HK5 1081 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 E4F1Q66K89 784 aaPredicted RBP6.65□□□□□ -1.34
CHD4-206ENST00000536999 SPECC1LQ69YQ0 1117 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 CYP4F22Q6NT55 531 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 SYT10Q6XYQ8 523 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 PPFIBP1Q86W92 1011 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 CNGA4Q8IV77 575 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 TMTC2Q8N394 836 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 AOPEPQ8N6M6 819 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 ZNF579Q8NAF0 562 aaKnown RBP6.65□□□□□ -1.34
CHD4-206ENST00000536999 LINC00301Q8NCQ3 95 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 CCDC148Q8NFR7 591 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 FAM71BQ8TC56 605 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 BAG1Q99933 345 aaPredicted RBP6.65□□□□□ -1.34
CHD4-206ENST00000536999 NRBP1Q9UHY1 535 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 TUBE1Q9UJT0 475 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 TTF2Q9UNY4 1162 aaKnown RBP6.65□□□□□ -1.34
CHD4-206ENST00000536999 TBC1D2BQ9UPU7 963 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 RTCBQ9Y3I0 505 aaKnown RBP6.65□□□□□ -1.34
CHD4-206ENST00000536999 USP16Q9Y5T5 823 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 CASP8AP2Q9UKL3 1982 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 PTPDC1A2A3K4 754 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 TADA3O75528 432 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 ZNF202O95125 648 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 GYS1P13807 737 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 XBP1P17861 261 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 EIF2S2P20042 333 aaKnown RBP6.64□□□□□ -1.35
CHD4-206ENST00000536999 ATP6V1AP38606 617 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 IL15P40933 162 aaPredicted RBP6.64□□□□□ -1.35
CHD4-206ENST00000536999 EIF5P55010 431 aaKnown RBP6.64□□□□□ -1.35
CHD4-206ENST00000536999 EXOSC10Q01780 885 aaKnown RBP6.64□□□□□ -1.35
CHD4-206ENST00000536999 PPP2R3AQ06190 1150 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 PDE4CQ08493 712 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 GNL2Q13823 731 aaKnown RBP6.64□□□□□ -1.35
CHD4-206ENST00000536999 SLC39A14Q15043 492 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 ERCC6LQ2NKX8 1250 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 CCDC144BQ3MJ40 725 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 ANO1Q5XXA6 986 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 GBP6Q6ZN66 633 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 RIC3Q7Z5B4 369 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 SRGAP1Q7Z6B7 1085 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 RALYLQ86SE5 291 aaKnown RBP6.64□□□□□ -1.35
CHD4-206ENST00000536999 VSTM4Q8IW00 320 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 CCDC144CPQ8IYA2 1237 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 PLCD3Q8N3E9 789 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 NSUN7Q8NE18 718 aaKnown RBP6.64□□□□□ -1.35
CHD4-206ENST00000536999 ENOX1Q8TC92 643 aaKnown RBP6.64□□□□□ -1.35
CHD4-206ENST00000536999 UBXN6Q9BZV1 441 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 XPO4Q9C0E2 1151 aaKnown RBP6.64□□□□□ -1.35
CHD4-206ENST00000536999 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.64□□□□□ -1.354e-6■■■■□ 19.9
CHD4-206ENST00000536999 TAF1DQ9H5J8 278 aaPredicted RBP6.64□□□□□ -1.35
CHD4-206ENST00000536999 TMEM51Q9NW97 253 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 TRMT1Q9NXH9 659 aaKnown RBP6.64□□□□□ -1.35
CHD4-206ENST00000536999 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.64□□□□□ -1.353e-14■■□□□ 12.9
CHD4-206ENST00000536999 MIS18AQ9NYP9 233 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 IFNKQ9P0W0 207 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 MAP3K2Q9Y2U5 619 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 CARMIL3Q8ND23 1372 aa6.64□□□□□ -1.35
CHD4-206ENST00000536999 CTAGE9A4FU28 777 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 NFKBIEO00221 500 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 MEGF6O75095 1541 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 CIAO1O76071 339 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 LARGE1O95461 756 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 MAP4K4O95819 1239 aaPredicted RBP6.63□□□□□ -1.35
CHD4-206ENST00000536999 CALRP27797 417 aaKnown RBP6.63□□□□□ -1.35
CHD4-206ENST00000536999 ADD1P35611 737 aaKnown RBP6.63□□□□□ -1.35
CHD4-206ENST00000536999 MAP2K2P36507 400 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 PPP1R2P41236 205 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 MAGEA9P43362 315 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 HNRNPH2P55795 449 aaKnown RBP6.63□□□□□ -1.35
CHD4-206ENST00000536999 GNG11P61952 73 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 IRX5P78411 483 aaPredicted RBP6.63□□□□□ -1.35
CHD4-206ENST00000536999 CKAP4Q07065 602 aaKnown RBP6.63□□□□□ -1.35
CHD4-206ENST00000536999 SCRN1Q12765 414 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 LTBP1Q14766 1721 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 TTF1Q15361 905 aaPredicted RBP6.63□□□□□ -1.35
CHD4-206ENST00000536999 MAP1SQ66K74 1059 aaPredicted RBP6.63□□□□□ -1.35
CHD4-206ENST00000536999 CC2D1AQ6P1N0 951 aaPredicted RBP6.63□□□□□ -1.35
CHD4-206ENST00000536999 NBPF11Q86T75 865 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 TMTC1Q8IUR5 882 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 EFCAB13Q8IY85 973 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 MPNDQ8N594 471 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 NCOA7Q8NI08 942 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 TSC1Q92574 1164 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 TMEM87BQ96K49 555 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 BOLA2Q9H3K6 86 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 GEMIN8Q9NWZ8 242 aaKnown RBP6.63□□□□□ -1.35
CHD4-206ENST00000536999 CHPF2Q9P2E5 772 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 RAB21Q9UL25 225 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 PCDHA7Q9UN72 937 aa6.63□□□□□ -1.35
CHD4-206ENST00000536999 PPP2R2CQ9Y2T4 447 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms