RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 SMCR8Q8TEV9 937 aaPredicted RBP24.15■■□□□ 1.46
TNFRSF1B-204ENST00000536782 DBNDD2Q9BQY9 259 aa24.15■■□□□ 1.46
TNFRSF1B-204ENST00000536782 C1orf115Q9H7X2 142 aa24.15■■□□□ 1.46
TNFRSF1B-204ENST00000536782 BAG3O95817 575 aa24.14■■□□□ 1.45
TNFRSF1B-204ENST00000536782 PRKCZQ05513 592 aa24.14■■□□□ 1.45
TNFRSF1B-204ENST00000536782 MTFR1Q15390 333 aa24.14■■□□□ 1.45
TNFRSF1B-204ENST00000536782 NAA16Q6N069 864 aaPredicted RBP24.14■■□□□ 1.45
TNFRSF1B-204ENST00000536782 ITPRIPQ8IWB1 547 aa24.14■■□□□ 1.45
TNFRSF1B-204ENST00000536782 SH3RF3Q8TEJ3 882 aaPredicted RBP24.14■■□□□ 1.45
TNFRSF1B-204ENST00000536782 AGTPBP1Q9UPW5 1226 aa24.14■■□□□ 1.45
TNFRSF1B-204ENST00000536782 ATAD5Q96QE3 1844 aa24.13■■□□□ 1.45
TNFRSF1B-204ENST00000536782 PLCG2P16885 1265 aa24.13■■□□□ 1.45
TNFRSF1B-204ENST00000536782 TBC1D2Q9BYX2 928 aa24.13■■□□□ 1.45
TNFRSF1B-204ENST00000536782 AATFQ9NY61 560 aaKnown RBP eCLIP24.13■■□□□ 1.45
TNFRSF1B-204ENST00000536782 BIN2Q9UBW5 565 aaPredicted RBP24.13■■□□□ 1.45
TNFRSF1B-204ENST00000536782 HERC5Q9UII4 1024 aaKnown RBP24.13■■□□□ 1.45
TNFRSF1B-204ENST00000536782 RANBP2P49792 3224 aaKnown RBP24.12■■□□□ 1.45
TNFRSF1B-204ENST00000536782 ZBTB7BO15156 539 aaPredicted RBP24.12■■□□□ 1.45
TNFRSF1B-204ENST00000536782 CAP2P40123 477 aa24.12■■□□□ 1.45
TNFRSF1B-204ENST00000536782 SPP2Q13103 211 aa24.12■■□□□ 1.45
TNFRSF1B-204ENST00000536782 PROCA1Q8NCQ7 364 aaPredicted RBP24.12■■□□□ 1.45
TNFRSF1B-204ENST00000536782 ZNF512BQ96KM6 892 aaPredicted RBP24.12■■□□□ 1.45
TNFRSF1B-204ENST00000536782 DHX36Q9H2U1 1008 aaKnown RBP24.12■■□□□ 1.45
TNFRSF1B-204ENST00000536782 NOP58Q9Y2X3 529 aaKnown RBP24.12■■□□□ 1.45
TNFRSF1B-204ENST00000536782 MYO5AQ9Y4I1 1855 aaKnown RBP24.11■■□□□ 1.45
TNFRSF1B-204ENST00000536782 CYP2E1P05181 493 aaPredicted RBP24.11■■□□□ 1.45
TNFRSF1B-204ENST00000536782 UBXN2AP68543 259 aa24.11■■□□□ 1.45
TNFRSF1B-204ENST00000536782 MIER1Q8N108 512 aa24.11■■□□□ 1.45
TNFRSF1B-204ENST00000536782 ZNF280CQ8ND82 737 aa24.11■■□□□ 1.45
TNFRSF1B-204ENST00000536782 SLAIN1Q8ND83 568 aa24.11■■□□□ 1.45
TNFRSF1B-204ENST00000536782 NKX2-3Q8TAU0 364 aa24.11■■□□□ 1.45
TNFRSF1B-204ENST00000536782 SHISA4Q96DD7 197 aa24.11■■□□□ 1.45
TNFRSF1B-204ENST00000536782 PI4KBQ9UBF8 816 aa24.11■■□□□ 1.45
TNFRSF1B-204ENST00000536782 PNMA3Q9UL41 463 aa24.11■■□□□ 1.45
TNFRSF1B-204ENST00000536782 GABRQQ9UN88 632 aa24.11■■□□□ 1.45
TNFRSF1B-204ENST00000536782 CDK5RAP2Q96SN8 1893 aa24.11■■□□□ 1.45
TNFRSF1B-204ENST00000536782 IGSF3O75054 1194 aa24.1■■□□□ 1.45
TNFRSF1B-204ENST00000536782 RLBP1P12271 317 aa24.1■■□□□ 1.45
TNFRSF1B-204ENST00000536782 PPP4CP60510 307 aa24.1■■□□□ 1.45
TNFRSF1B-204ENST00000536782 TREML2Q5T2D2 321 aa24.1■■□□□ 1.45
TNFRSF1B-204ENST00000536782 USP17L5A8MUK1 530 aa24.09■■□□□ 1.45
TNFRSF1B-204ENST00000536782 TNPO2O14787 897 aaKnown RBP24.09■■□□□ 1.45
TNFRSF1B-204ENST00000536782 CCL5P13501 91 aa24.09■■□□□ 1.45
TNFRSF1B-204ENST00000536782 ZAP70P43403 619 aa24.09■■□□□ 1.45
TNFRSF1B-204ENST00000536782 RRP1BQ14684 758 aaKnown RBP24.09■■□□□ 1.45
TNFRSF1B-204ENST00000536782 TGFBRAP1Q8WUH2 860 aa24.09■■□□□ 1.45
TNFRSF1B-204ENST00000536782 RNF208Q9H0X6 261 aa24.09■■□□□ 1.45
TNFRSF1B-204ENST00000536782 AS3MTQ9HBK9 375 aa24.09■■□□□ 1.45
TNFRSF1B-204ENST00000536782 SIPA1L1O43166 1804 aa24.08■■□□□ 1.45
TNFRSF1B-204ENST00000536782 GJB1P08034 283 aa24.08■■□□□ 1.45
TNFRSF1B-204ENST00000536782 FLT3LGP49771 235 aa24.08■■□□□ 1.45
TNFRSF1B-204ENST00000536782 PABPC4Q13310 644 aaKnown RBP eCLIP24.08■■□□□ 1.45
TNFRSF1B-204ENST00000536782 ADGRA1Q86SQ6 560 aa24.08■■□□□ 1.45
TNFRSF1B-204ENST00000536782 ANKRD13CQ8N6S4 541 aa24.08■■□□□ 1.45
TNFRSF1B-204ENST00000536782 DBNLQ9UJU6 430 aaKnown RBP24.08■■□□□ 1.45
TNFRSF1B-204ENST00000536782 MAST2Q6P0Q8 1798 aa24.08■■□□□ 1.44
TNFRSF1B-204ENST00000536782 ADCY3O60266 1144 aa24.07■■□□□ 1.44
TNFRSF1B-204ENST00000536782 GJA8P48165 433 aa24.07■■□□□ 1.44
TNFRSF1B-204ENST00000536782 HMGCS2P54868 508 aa24.07■■□□□ 1.44
TNFRSF1B-204ENST00000536782 MAPKAPK5Q8IW41 473 aa24.07■■□□□ 1.44
TNFRSF1B-204ENST00000536782 CCDC8Q9H0W5 538 aaPredicted RBP24.07■■□□□ 1.44
TNFRSF1B-204ENST00000536782 PIH1D3Q9NQM4 214 aaKnown RBP24.07■■□□□ 1.44
TNFRSF1B-204ENST00000536782 FLT1P17948 1338 aa24.07■■□□□ 1.44
TNFRSF1B-204ENST00000536782 LOC285556D6RIA3 1793 aa24.06■■□□□ 1.44
TNFRSF1B-204ENST00000536782 SZT2Q5T011 3432 aa24.06■■□□□ 1.44
TNFRSF1B-204ENST00000536782 FAM110CQ1W6H9 321 aa24.06■■□□□ 1.44
TNFRSF1B-204ENST00000536782 FOXP4Q8IVH2 680 aaPredicted RBP24.06■■□□□ 1.44
TNFRSF1B-204ENST00000536782 COA7Q96BR5 231 aa24.06■■□□□ 1.44
TNFRSF1B-204ENST00000536782 EAF2Q96CJ1 260 aaPredicted RBP24.06■■□□□ 1.44
TNFRSF1B-204ENST00000536782 TLR7Q9NYK1 1049 aaKnown RBP24.06■■□□□ 1.44
TNFRSF1B-204ENST00000536782 GCLCP48506 637 aaPredicted RBP24.05■■□□□ 1.44
TNFRSF1B-204ENST00000536782 IRF5Q13568 498 aa24.05■■□□□ 1.44
TNFRSF1B-204ENST00000536782 SH3D19Q5HYK7 790 aa24.05■■□□□ 1.44
TNFRSF1B-204ENST00000536782 CRACR2BQ8N4Y2 399 aaPredicted RBP24.05■■□□□ 1.44
TNFRSF1B-204ENST00000536782 PXYLP1Q8TE99 480 aa24.05■■□□□ 1.44
TNFRSF1B-204ENST00000536782 TRIM34Q9BYJ4 488 aa24.05■■□□□ 1.44
TNFRSF1B-204ENST00000536782 ASNSP08243 561 aa24.04■■□□□ 1.44
TNFRSF1B-204ENST00000536782 DIEXFQ68CQ4 756 aaKnown RBP24.04■■□□□ 1.44
TNFRSF1B-204ENST00000536782 CEP85Q6P2H3 762 aa24.04■■□□□ 1.44
TNFRSF1B-204ENST00000536782 UBE2Q1Q7Z7E8 422 aa24.04■■□□□ 1.44
TNFRSF1B-204ENST00000536782 WDR18Q9BV38 432 aa24.04■■□□□ 1.44
TNFRSF1B-204ENST00000536782 PALD1Q9ULE6 856 aa24.04■■□□□ 1.44
TNFRSF1B-204ENST00000536782 FOCADQ5VW36 1801 aa24.04■■□□□ 1.44
TNFRSF1B-204ENST00000536782 IDH1O75874 414 aaKnown RBP24.03■■□□□ 1.44
TNFRSF1B-204ENST00000536782 ELNP15502 786 aa24.03■■□□□ 1.44
TNFRSF1B-204ENST00000536782 CYP7A1P22680 504 aa24.03■■□□□ 1.44
TNFRSF1B-204ENST00000536782 FXR1P51114 621 aaKnown RBP eCLIP24.03■■□□□ 1.44
TNFRSF1B-204ENST00000536782 METTL16Q86W50 562 aaKnown RBP24.03■■□□□ 1.44
TNFRSF1B-204ENST00000536782 UNC93B1Q9H1C4 597 aa24.03■■□□□ 1.44
TNFRSF1B-204ENST00000536782 DNAJC18Q9H819 358 aa24.03■■□□□ 1.44
TNFRSF1B-204ENST00000536782 COLQQ9Y215 455 aaPredicted RBP24.03■■□□□ 1.44
TNFRSF1B-204ENST00000536782 H0YGN5 161 aa24.02■■□□□ 1.44
TNFRSF1B-204ENST00000536782 HLA-DOAP06340 250 aa24.02■■□□□ 1.44
TNFRSF1B-204ENST00000536782 DYNLL1P63167 89 aaKnown RBP24.02■■□□□ 1.44
TNFRSF1B-204ENST00000536782 MTMR2Q13614 643 aa24.02■■□□□ 1.44
TNFRSF1B-204ENST00000536782 ERC1Q8IUD2 1116 aa24.02■■□□□ 1.44
TNFRSF1B-204ENST00000536782 U2AF1L4Q8WU68 220 aaKnown RBP24.02■■□□□ 1.44
TNFRSF1B-204ENST00000536782 ASCC2Q9H1I8 757 aaPredicted RBP24.02■■□□□ 1.44
TNFRSF1B-204ENST00000536782 GINM1Q9NU53 330 aa24.02■■□□□ 1.44
TNFRSF1B-204ENST00000536782 TAOK2Q9UL54 1235 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms