RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 MAGEB6Q8N7X4 407 aa18.23■□□□□ 0.51
UBC-204ENST00000536661 TGFBRAP1Q8WUH2 860 aa18.23■□□□□ 0.51
UBC-204ENST00000536661 BCL11AQ9H165 835 aa18.23■□□□□ 0.51
UBC-204ENST00000536661 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.23■□□□□ 0.51
UBC-204ENST00000536661 ZHX2Q9Y6X8 837 aa18.23■□□□□ 0.51
UBC-204ENST00000536661 MGAMO43451 1857 aa18.22■□□□□ 0.51
UBC-204ENST00000536661 TLR2O60603 784 aa18.22■□□□□ 0.51
UBC-204ENST00000536661 CCDC84Q86UT8 332 aaPredicted RBP18.22■□□□□ 0.51
UBC-204ENST00000536661 MAPKAPK5Q8IW41 473 aa18.22■□□□□ 0.51
UBC-204ENST00000536661 MIGA1Q8NAN2 632 aa18.22■□□□□ 0.51
UBC-204ENST00000536661 PDHXO00330 501 aa18.21■□□□□ 0.51
UBC-204ENST00000536661 CXCL11O14625 94 aa18.21■□□□□ 0.51
UBC-204ENST00000536661 IFIT2P09913 472 aaKnown RBP18.21■□□□□ 0.51
UBC-204ENST00000536661 MAP3K12Q12852 859 aa18.21■□□□□ 0.51
UBC-204ENST00000536661 EFCC1Q9HA90 598 aa18.21■□□□□ 0.51
UBC-204ENST00000536661 AFG3L2Q9Y4W6 797 aa18.21■□□□□ 0.51
UBC-204ENST00000536661 ADGRA2Q96PE1 1338 aa18.21■□□□□ 0.51
UBC-204ENST00000536661 RBBP6Q7Z6E9 1792 aaKnown RBP18.2■□□□□ 0.5
UBC-204ENST00000536661 A0A0G2JLL6 359 aaPredicted RBP18.2■□□□□ 0.5
UBC-204ENST00000536661 RRP1BQ14684 758 aaKnown RBP18.2■□□□□ 0.5
UBC-204ENST00000536661 GPAT2Q6NUI2 795 aa18.2■□□□□ 0.5
UBC-204ENST00000536661 PRRT2Q7Z6L0 340 aaPredicted RBP18.2■□□□□ 0.5
UBC-204ENST00000536661 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.2■□□□□ 0.5
UBC-204ENST00000536661 DHX36Q9H2U1 1008 aaKnown RBP18.2■□□□□ 0.5
UBC-204ENST00000536661 HERC5Q9UII4 1024 aaKnown RBP18.2■□□□□ 0.5
UBC-204ENST00000536661 DNAJC2Q99543 621 aaKnown RBP18.19■□□□□ 0.5
UBC-204ENST00000536661 DNAJC18Q9H819 358 aa18.19■□□□□ 0.5
UBC-204ENST00000536661 PI4KBQ9UBF8 816 aa18.19■□□□□ 0.5
UBC-204ENST00000536661 SAP30BPQ9UHR5 308 aaKnown RBP18.19■□□□□ 0.5
UBC-204ENST00000536661 PTPN22Q9Y2R2 807 aa18.19■□□□□ 0.5
UBC-204ENST00000536661 TRIM75PA6NK02 468 aa18.18■□□□□ 0.5
UBC-204ENST00000536661 CAP2P40123 477 aa18.18■□□□□ 0.5
UBC-204ENST00000536661 TTF1Q15361 905 aaPredicted RBP18.18■□□□□ 0.5
UBC-204ENST00000536661 EDC3Q96F86 508 aaKnown RBP18.18■□□□□ 0.5
UBC-204ENST00000536661 ARHGAP39Q9C0H5 1083 aa18.18■□□□□ 0.5
UBC-204ENST00000536661 CPA4Q9UI42 421 aa18.18■□□□□ 0.5
UBC-204ENST00000536661 PALD1Q9ULE6 856 aa18.18■□□□□ 0.5
UBC-204ENST00000536661 GOLIM4O00461 696 aa18.17■□□□□ 0.5
UBC-204ENST00000536661 LACTBP83111 547 aaPredicted RBP18.17■□□□□ 0.5
UBC-204ENST00000536661 SLC4A8Q2Y0W8 1093 aa18.17■□□□□ 0.5
UBC-204ENST00000536661 TMED8Q6PL24 325 aaPredicted RBP18.17■□□□□ 0.5
UBC-204ENST00000536661 C17orf99Q6UX52 265 aa18.17■□□□□ 0.5
UBC-204ENST00000536661 GADL1Q6ZQY3 521 aa18.17■□□□□ 0.5
UBC-204ENST00000536661 FASTKD5Q7L8L6 764 aaKnown RBP18.17■□□□□ 0.5
UBC-204ENST00000536661 CERS3Q8IU89 383 aa18.17■□□□□ 0.5
UBC-204ENST00000536661 LRRCC1Q9C099 1032 aa18.17■□□□□ 0.5
UBC-204ENST00000536661 BRCA2P51587 3418 aa18.17■□□□□ 0.5
UBC-204ENST00000536661 SMARCA5O60264 1052 aaPredicted RBP18.16■□□□□ 0.5
UBC-204ENST00000536661 CYP2C8P10632 490 aa18.16■□□□□ 0.5
UBC-204ENST00000536661 PDE6AP16499 860 aa18.16■□□□□ 0.5
UBC-204ENST00000536661 USP5P45974 858 aa18.16■□□□□ 0.5
UBC-204ENST00000536661 METTL16Q86W50 562 aaKnown RBP18.16■□□□□ 0.5
UBC-204ENST00000536661 CRACR2BQ8N4Y2 399 aaPredicted RBP18.16■□□□□ 0.5
UBC-204ENST00000536661 PARK7Q99497 189 aaKnown RBP18.16■□□□□ 0.5
UBC-204ENST00000536661 RIOK1Q9BRS2 568 aaKnown RBP18.16■□□□□ 0.5
UBC-204ENST00000536661 MYH8P13535 1937 aa18.15■□□□□ 0.5
UBC-204ENST00000536661 BAZ2AQ9UIF9 1905 aaKnown RBP18.15■□□□□ 0.5
UBC-204ENST00000536661 ATP5JP18859 108 aa18.15■□□□□ 0.5
UBC-204ENST00000536661 RRP1P56182 461 aaKnown RBP18.15■□□□□ 0.5
UBC-204ENST00000536661 SLC9C2Q5TAH2 1124 aa18.15■□□□□ 0.5
UBC-204ENST00000536661 FOXP4Q8IVH2 680 aaPredicted RBP18.15■□□□□ 0.5
UBC-204ENST00000536661 YTHDC1Q96MU7 727 aaKnown RBP18.15■□□□□ 0.5
UBC-204ENST00000536661 BOLA2Q9H3K6 86 aa18.15■□□□□ 0.5
UBC-204ENST00000536661 MKI67P46013 3256 aaKnown RBP18.15■□□□□ 0.5
UBC-204ENST00000536661 TCRBV5S4A2TA0A5A2 114 aa18.14■□□□□ 0.49
UBC-204ENST00000536661 ECM2O94769 699 aaPredicted RBP18.14■□□□□ 0.49
UBC-204ENST00000536661 HLA-DOAP06340 250 aa18.14■□□□□ 0.49
UBC-204ENST00000536661 CTGFP29279 349 aa18.14■□□□□ 0.49
UBC-204ENST00000536661 JAG1P78504 1218 aa18.14■□□□□ 0.49
UBC-204ENST00000536661 SPP2Q13103 211 aa18.14■□□□□ 0.49
UBC-204ENST00000536661 KIF22Q14807 665 aa18.14■□□□□ 0.49
UBC-204ENST00000536661 ARHGEF6Q15052 776 aa18.14■□□□□ 0.49
UBC-204ENST00000536661 SHROOM1Q2M3G4 852 aaPredicted RBP18.14■□□□□ 0.49
UBC-204ENST00000536661 ZNF280CQ8ND82 737 aa18.14■□□□□ 0.49
UBC-204ENST00000536661 TBC1D2Q9BYX2 928 aa18.14■□□□□ 0.49
UBC-204ENST00000536661 PAG1Q9NWQ8 432 aa18.14■□□□□ 0.49
UBC-204ENST00000536661 PTCH2Q9Y6C5 1203 aa18.14■□□□□ 0.49
UBC-204ENST00000536661 ZNF532Q9HCE3 1301 aa18.14■□□□□ 0.49
UBC-204ENST00000536661 MAGEB6P1A0A0J9YX57 407 aa18.13■□□□□ 0.49
UBC-204ENST00000536661 USP17L5A8MUK1 530 aa18.13■□□□□ 0.49
UBC-204ENST00000536661 BCRP11274 1271 aa18.13■□□□□ 0.49
UBC-204ENST00000536661 HAUS7Q99871 368 aa18.13■□□□□ 0.49
UBC-204ENST00000536661 TRIM34Q9BYJ4 488 aa18.13■□□□□ 0.49
UBC-204ENST00000536661 DCTPP1Q9H773 170 aa18.13■□□□□ 0.49
UBC-204ENST00000536661 AGTPBP1Q9UPW5 1226 aa18.13■□□□□ 0.49
UBC-204ENST00000536661 SLC45A1Q9Y2W3 748 aa18.13■□□□□ 0.49
UBC-204ENST00000536661 POTEFA5A3E0 1075 aa18.12■□□□□ 0.49
UBC-204ENST00000536661 GDF11O95390 407 aa18.12■□□□□ 0.49
UBC-204ENST00000536661 ASNSP08243 561 aa18.12■□□□□ 0.49
UBC-204ENST00000536661 TREML2Q5T2D2 321 aa18.12■□□□□ 0.49
UBC-204ENST00000536661 ARMC5Q96C12 935 aa18.12■□□□□ 0.49
UBC-204ENST00000536661 PCDHB15Q9Y5E8 787 aa18.12■□□□□ 0.49
UBC-204ENST00000536661 PDE4DIPQ5VU43 2346 aa18.11■□□□□ 0.49
UBC-204ENST00000536661 PSMC4P43686 418 aa18.11■□□□□ 0.49
UBC-204ENST00000536661 HMGCS2P54868 508 aa18.11■□□□□ 0.49
UBC-204ENST00000536661 SLFNL1Q499Z3 407 aa18.11■□□□□ 0.49
UBC-204ENST00000536661 LCORLQ8N3X6 602 aa18.11■□□□□ 0.49
UBC-204ENST00000536661 PROCA1Q8NCQ7 364 aaPredicted RBP18.11■□□□□ 0.49
UBC-204ENST00000536661 TRIM47Q96LD4 638 aa18.11■□□□□ 0.49
UBC-204ENST00000536661 EHD4Q9H223 541 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms