RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 AKAP4Q5JQC9 854 aa2.11□□□□□ -2.07
COPB1-212ENST00000534771 CPZQ66K79 652 aa2.11□□□□□ -2.07
COPB1-212ENST00000534771 DDX54Q8TDD1 881 aaKnown RBP2.11□□□□□ -2.07
COPB1-212ENST00000534771 CORO1BQ9BR76 489 aa2.11□□□□□ -2.07
COPB1-212ENST00000534771 BHLHE41Q9C0J9 482 aaPredicted RBP2.11□□□□□ -2.07
COPB1-212ENST00000534771 NRSN2Q9GZP1 204 aa2.11□□□□□ -2.07
COPB1-212ENST00000534771 GSX1Q9H4S2 264 aaPredicted RBP2.11□□□□□ -2.07
COPB1-212ENST00000534771 MKNK2Q9HBH9 465 aa2.11□□□□□ -2.07
COPB1-212ENST00000534771 AP4E1Q9UPM8 1137 aa2.11□□□□□ -2.07
COPB1-212ENST00000534771 DAGLAQ9Y4D2 1042 aa2.11□□□□□ -2.07
COPB1-212ENST00000534771 TMEM265A0A087WTH1 108 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 A0A096LPE4 126 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 A0A1W2PPZ6 126 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 METTL12A8MUP2 240 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 DYNC1LI2O43237 492 aaPredicted RBP2.1□□□□□ -2.07
COPB1-212ENST00000534771 PHACTR2O75167 634 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 TNFRSF21O75509 655 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 PDGFAP04085 211 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 CTSBP07858 339 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 SLFN14P0C7P3 912 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 FAM87AP0C7U9 286 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 NANOS3P60323 173 aaKnown RBP2.1□□□□□ -2.07
COPB1-212ENST00000534771 EHHADHQ08426 723 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 AAMPQ13685 434 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 ZNF423Q2M1K9 1284 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 PEAR1Q5VY43 1037 aaPredicted RBP2.1□□□□□ -2.07
COPB1-212ENST00000534771 TMEM132EQ6IEE7 984 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 CRIP3Q6Q6R5 217 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 ARHGAP27Q6ZUM4 889 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 SPRED1Q7Z699 444 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 SP8Q8IXZ3 490 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 STK32AQ8WU08 396 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 MCOLN1Q9GZU1 580 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 CLEC4MQ9H2X3 399 aaPredicted RBP2.1□□□□□ -2.07
COPB1-212ENST00000534771 ZMIZ1Q9ULJ6 1067 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 U3KQE9 123 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 SYNGAP1Q96PV0 1343 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 OBSCNQ5VST9 7968 aa2.1□□□□□ -2.07
COPB1-212ENST00000534771 AOC2O75106 756 aa2.09□□□□□ -2.07
COPB1-212ENST00000534771 USP5P45974 858 aa2.09□□□□□ -2.07
COPB1-212ENST00000534771 EIF1AXP47813 144 aaKnown RBP2.09□□□□□ -2.07
COPB1-212ENST00000534771 AFF3P51826 1226 aaKnown RBP2.09□□□□□ -2.07
COPB1-212ENST00000534771 OXCT1P55809 520 aa2.09□□□□□ -2.07
COPB1-212ENST00000534771 PCDH1Q08174 1060 aa2.09□□□□□ -2.07
COPB1-212ENST00000534771 PDE3AQ14432 1141 aa2.09□□□□□ -2.07
COPB1-212ENST00000534771 UBXN11Q5T124 520 aa2.09□□□□□ -2.07
COPB1-212ENST00000534771 ALKBH2Q6NS38 261 aa2.09□□□□□ -2.07
COPB1-212ENST00000534771 SNX29Q8TEQ0 813 aa2.09□□□□□ -2.07
COPB1-212ENST00000534771 ASB11Q8WXH4 323 aa2.09□□□□□ -2.07
COPB1-212ENST00000534771 CLP1Q92989 425 aaKnown RBP2.09□□□□□ -2.07
COPB1-212ENST00000534771 VOPP1Q96AW1 172 aa2.09□□□□□ -2.07
COPB1-212ENST00000534771 SGPP1Q9BX95 441 aa2.09□□□□□ -2.07
COPB1-212ENST00000534771 PIDD1Q9HB75 910 aa2.09□□□□□ -2.07
COPB1-212ENST00000534771 ZFYVE28Q9HCC9 887 aa2.09□□□□□ -2.07
COPB1-212ENST00000534771 SEPT3Q9UH03 358 aa2.09□□□□□ -2.07
COPB1-212ENST00000534771 ZNF777Q9ULD5 760 aaPredicted RBP2.09□□□□□ -2.07
COPB1-212ENST00000534771 PPP1R9AQ9ULJ8 1098 aa2.09□□□□□ -2.07
COPB1-212ENST00000534771 POLIQ9UNA4 740 aa2.09□□□□□ -2.07
COPB1-212ENST00000534771 AMOTL2Q9Y2J4 779 aa2.09□□□□□ -2.07
COPB1-212ENST00000534771 SNX11Q9Y5W9 270 aa2.09□□□□□ -2.07
COPB1-212ENST00000534771 SLC22A31A6NKX4 558 aa2.08□□□□□ -2.08
COPB1-212ENST00000534771 ATG7O95352 703 aa2.08□□□□□ -2.08
COPB1-212ENST00000534771 ECEL1O95672 775 aa2.08□□□□□ -2.08
COPB1-212ENST00000534771 GRIA4P48058 902 aa2.08□□□□□ -2.08
COPB1-212ENST00000534771 CDK5R2Q13319 367 aa2.08□□□□□ -2.08
COPB1-212ENST00000534771 SPRED3Q2MJR0 410 aa2.08□□□□□ -2.08
COPB1-212ENST00000534771 TMEM164Q5U3C3 297 aa2.08□□□□□ -2.08
COPB1-212ENST00000534771 CCNJLQ8IV13 435 aa2.08□□□□□ -2.08
COPB1-212ENST00000534771 SMYD4Q8IYR2 804 aaPredicted RBP2.08□□□□□ -2.08
COPB1-212ENST00000534771 HELQQ8TDG4 1101 aa2.08□□□□□ -2.08
COPB1-212ENST00000534771 FANCD2OSQ96PS1 177 aa2.08□□□□□ -2.08
COPB1-212ENST00000534771 WDR18Q9BV38 432 aa2.08□□□□□ -2.08
COPB1-212ENST00000534771 ATXN3LQ9H3M9 355 aa2.08□□□□□ -2.08
COPB1-212ENST00000534771 LIN7BQ9HAP6 207 aa2.08□□□□□ -2.08
COPB1-212ENST00000534771 LATS2Q9NRM7 1088 aa2.08□□□□□ -2.08
COPB1-212ENST00000534771 FOXD3Q9UJU5 478 aaPredicted RBP2.08□□□□□ -2.08
COPB1-212ENST00000534771 PCOLCE2Q9UKZ9 415 aa2.08□□□□□ -2.08
COPB1-212ENST00000534771 PLAGL2Q9UPG8 496 aa2.08□□□□□ -2.08
COPB1-212ENST00000534771 A0A1W2PP55 124 aa2.07□□□□□ -2.08
COPB1-212ENST00000534771 TMPRSS2O15393 492 aa2.07□□□□□ -2.08
COPB1-212ENST00000534771 RNGTTO60942 597 aaKnown RBP2.07□□□□□ -2.08
COPB1-212ENST00000534771 B3GALT4O96024 378 aa2.07□□□□□ -2.08
COPB1-212ENST00000534771 CEACAM5P06731 702 aa2.07□□□□□ -2.08
COPB1-212ENST00000534771 ZNF20P17024 532 aa2.07□□□□□ -2.08
COPB1-212ENST00000534771 LIG1P18858 919 aa2.07□□□□□ -2.08
COPB1-212ENST00000534771 PI3P19957 117 aa2.07□□□□□ -2.08
COPB1-212ENST00000534771 ATP2B4P23634 1241 aa2.07□□□□□ -2.08
COPB1-212ENST00000534771 MPSTP25325 297 aa2.07□□□□□ -2.08
COPB1-212ENST00000534771 SRPK2P78362 688 aaKnown RBP2.07□□□□□ -2.08
COPB1-212ENST00000534771 HNRNPUQ00839 825 aaKnown RBP eCLIP2.07□□□□□ -2.08
COPB1-212ENST00000534771 DNAJC10Q8IXB1 793 aa2.07□□□□□ -2.08
COPB1-212ENST00000534771 ABHD4Q8TB40 342 aa2.07□□□□□ -2.08
COPB1-212ENST00000534771 DACT3Q96B18 629 aaPredicted RBP2.07□□□□□ -2.08
COPB1-212ENST00000534771 TRIM56Q9BRZ2 755 aaKnown RBP2.07□□□□□ -2.08
COPB1-212ENST00000534771 DUSP23Q9BVJ7 150 aa2.07□□□□□ -2.08
COPB1-212ENST00000534771 KRTAP4-3Q9BYR4 195 aa2.07□□□□□ -2.08
COPB1-212ENST00000534771 SSU72Q9NP77 194 aaKnown RBP2.07□□□□□ -2.08
COPB1-212ENST00000534771 C19orf73Q9NVV2 129 aa2.07□□□□□ -2.08
COPB1-212ENST00000534771 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.06□□□□□ -2.08
COPB1-212ENST00000534771 SLC24A1O60721 1099 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms