RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 NKX2-3Q8TAU0 364 aa22.25■■□□□ 1.15
UBXN1-216ENST00000533908 SH3RF3Q8TEJ3 882 aaPredicted RBP22.25■■□□□ 1.15
UBXN1-216ENST00000533908 SNRKQ9NRH2 765 aa22.25■■□□□ 1.15
UBXN1-216ENST00000533908 UBXN2AP68543 259 aa22.24■■□□□ 1.15
UBXN1-216ENST00000533908 SMCR8Q8TEV9 937 aaPredicted RBP22.24■■□□□ 1.15
UBXN1-216ENST00000533908 U2AF1L4Q8WU68 220 aaKnown RBP22.24■■□□□ 1.15
UBXN1-216ENST00000533908 DPF3Q92784 378 aa22.24■■□□□ 1.15
UBXN1-216ENST00000533908 TNPO2O14787 897 aaKnown RBP22.23■■□□□ 1.15
UBXN1-216ENST00000533908 MAP4K4O95819 1239 aaPredicted RBP22.23■■□□□ 1.15
UBXN1-216ENST00000533908 CAP2P40123 477 aa22.23■■□□□ 1.15
UBXN1-216ENST00000533908 JAG1P78504 1218 aa22.23■■□□□ 1.15
UBXN1-216ENST00000533908 TMEM57Q8N5G2 664 aa22.23■■□□□ 1.15
UBXN1-216ENST00000533908 LRP2BPQ9P2M1 347 aa22.23■■□□□ 1.15
UBXN1-216ENST00000533908 SGPL1O95470 568 aa22.22■■□□□ 1.15
UBXN1-216ENST00000533908 INHAP05111 366 aa22.22■■□□□ 1.15
UBXN1-216ENST00000533908 IRF5Q13568 498 aa22.22■■□□□ 1.15
UBXN1-216ENST00000533908 POLA2Q14181 598 aa22.22■■□□□ 1.15
UBXN1-216ENST00000533908 TEX11Q8IYF3 940 aa22.22■■□□□ 1.15
UBXN1-216ENST00000533908 ZNF280CQ8ND82 737 aa22.22■■□□□ 1.15
UBXN1-216ENST00000533908 PXYLP1Q8TE99 480 aa22.22■■□□□ 1.15
UBXN1-216ENST00000533908 DOCK3Q8IZD9 2030 aa22.22■■□□□ 1.15
UBXN1-216ENST00000533908 COL2A1P02458 1487 aaPredicted RBP22.22■■□□□ 1.15
UBXN1-216ENST00000533908 TRIOBPQ9H2D6 2365 aa22.21■■□□□ 1.15
UBXN1-216ENST00000533908 UQCRFS1P1P0C7P4 283 aa22.21■■□□□ 1.15
UBXN1-216ENST00000533908 HMGCS2P54868 508 aa22.21■■□□□ 1.15
UBXN1-216ENST00000533908 CHRDL2Q6WN34 429 aa22.21■■□□□ 1.15
UBXN1-216ENST00000533908 ADGRA1Q86SQ6 560 aa22.21■■□□□ 1.15
UBXN1-216ENST00000533908 PROCA1Q8NCQ7 364 aaPredicted RBP22.21■■□□□ 1.15
UBXN1-216ENST00000533908 DBNDD2Q9BQY9 259 aa22.21■■□□□ 1.15
UBXN1-216ENST00000533908 AATFQ9NY61 560 aaKnown RBP eCLIP22.2■■□□□ 1.14
UBXN1-216ENST00000533908 CYP2E1P05181 493 aaPredicted RBP22.19■■□□□ 1.14
UBXN1-216ENST00000533908 PPP4CP60510 307 aa22.19■■□□□ 1.14
UBXN1-216ENST00000533908 ATP8B2P98198 1209 aa22.19■■□□□ 1.14
UBXN1-216ENST00000533908 FAM110CQ1W6H9 321 aa22.19■■□□□ 1.14
UBXN1-216ENST00000533908 SHROOM1Q2M3G4 852 aaPredicted RBP22.19■■□□□ 1.14
UBXN1-216ENST00000533908 TNNI3KQ59H18 835 aa22.19■■□□□ 1.14
UBXN1-216ENST00000533908 SH3D19Q5HYK7 790 aa22.19■■□□□ 1.14
UBXN1-216ENST00000533908 SSH3Q8TE77 659 aa22.19■■□□□ 1.14
UBXN1-216ENST00000533908 DEFB118Q96PH6 123 aa22.19■■□□□ 1.14
UBXN1-216ENST00000533908 ASCC2Q9H1I8 757 aaPredicted RBP22.19■■□□□ 1.14
UBXN1-216ENST00000533908 GPR108Q9NPR9 543 aa22.19■■□□□ 1.14
UBXN1-216ENST00000533908 RBM27Q9P2N5 1060 aaKnown RBP22.19■■□□□ 1.14
UBXN1-216ENST00000533908 FPGT-TNNI3KV9GXZ4 949 aa22.19■■□□□ 1.14
UBXN1-216ENST00000533908 SIPA1L1O43166 1804 aa22.19■■□□□ 1.14
UBXN1-216ENST00000533908 USP17L5A8MUK1 530 aa22.18■■□□□ 1.14
UBXN1-216ENST00000533908 FARP2O94887 1054 aaPredicted RBP22.18■■□□□ 1.14
UBXN1-216ENST00000533908 NAA16Q6N069 864 aaPredicted RBP22.18■■□□□ 1.14
UBXN1-216ENST00000533908 TGFBRAP1Q8WUH2 860 aa22.18■■□□□ 1.14
UBXN1-216ENST00000533908 DNAJC18Q9H819 358 aa22.18■■□□□ 1.14
UBXN1-216ENST00000533908 PI4KBQ9UBF8 816 aa22.18■■□□□ 1.14
UBXN1-216ENST00000533908 GJD2Q9UKL4 321 aa22.18■■□□□ 1.14
UBXN1-216ENST00000533908 TAOK2Q9UL54 1235 aa22.18■■□□□ 1.14
UBXN1-216ENST00000533908 ATAD5Q96QE3 1844 aa22.17■■□□□ 1.14
UBXN1-216ENST00000533908 LOC285556D6RIA3 1793 aa22.17■■□□□ 1.14
UBXN1-216ENST00000533908 PEX10O60683 326 aa22.17■■□□□ 1.14
UBXN1-216ENST00000533908 TTC39AQ5SRH9 613 aa22.17■■□□□ 1.14
UBXN1-216ENST00000533908 MAPKAPK5Q8IW41 473 aa22.17■■□□□ 1.14
UBXN1-216ENST00000533908 COA7Q96BR5 231 aa22.17■■□□□ 1.14
UBXN1-216ENST00000533908 PRO3102Q9H379 93 aa22.17■■□□□ 1.14
UBXN1-216ENST00000533908 C1orf115Q9H7X2 142 aa22.17■■□□□ 1.14
UBXN1-216ENST00000533908 PAK6Q9NQU5 681 aaPredicted RBP22.17■■□□□ 1.14
UBXN1-216ENST00000533908 HERC5Q9UII4 1024 aaKnown RBP22.17■■□□□ 1.14
UBXN1-216ENST00000533908 PNMA3Q9UL41 463 aa22.17■■□□□ 1.14
UBXN1-216ENST00000533908 TFRCP02786 760 aaKnown RBP22.16■■□□□ 1.14
UBXN1-216ENST00000533908 GCLCP48506 637 aaPredicted RBP22.16■■□□□ 1.14
UBXN1-216ENST00000533908 ZKSCAN2Q63HK3 967 aa22.16■■□□□ 1.14
UBXN1-216ENST00000533908 METTL16Q86W50 562 aaKnown RBP22.16■■□□□ 1.14
UBXN1-216ENST00000533908 HTATIP2Q9BUP3 242 aa22.16■■□□□ 1.14
UBXN1-216ENST00000533908 WDR18Q9BV38 432 aa22.16■■□□□ 1.14
UBXN1-216ENST00000533908 CRISPLD2Q9H0B8 497 aa22.16■■□□□ 1.14
UBXN1-216ENST00000533908 PIH1D3Q9NQM4 214 aaKnown RBP22.16■■□□□ 1.14
UBXN1-216ENST00000533908 MYO5AQ9Y4I1 1855 aaKnown RBP22.15■■□□□ 1.14
UBXN1-216ENST00000533908 SURF6O75683 361 aaKnown RBP22.15■■□□□ 1.14
UBXN1-216ENST00000533908 ZAP70P43403 619 aa22.15■■□□□ 1.14
UBXN1-216ENST00000533908 CCDC158Q5M9N0 1113 aa22.15■■□□□ 1.14
UBXN1-216ENST00000533908 TBC1D2Q9BYX2 928 aa22.15■■□□□ 1.14
UBXN1-216ENST00000533908 DHX36Q9H2U1 1008 aaKnown RBP22.15■■□□□ 1.14
UBXN1-216ENST00000533908 PALD1Q9ULE6 856 aa22.15■■□□□ 1.14
UBXN1-216ENST00000533908 ZBTB7BO15156 539 aaPredicted RBP22.14■■□□□ 1.13
UBXN1-216ENST00000533908 BAG3O95817 575 aa22.14■■□□□ 1.13
UBXN1-216ENST00000533908 DYNLL1P63167 89 aaKnown RBP22.14■■□□□ 1.13
UBXN1-216ENST00000533908 TRIM32Q13049 653 aa22.14■■□□□ 1.13
UBXN1-216ENST00000533908 MTMR2Q13614 643 aa22.14■■□□□ 1.13
UBXN1-216ENST00000533908 ZNF512BQ96KM6 892 aaPredicted RBP22.14■■□□□ 1.13
UBXN1-216ENST00000533908 P2RX7Q99572 595 aaKnown RBP22.14■■□□□ 1.13
UBXN1-216ENST00000533908 NOL10Q9BSC4 688 aaKnown RBP22.14■■□□□ 1.13
UBXN1-216ENST00000533908 TLR7Q9NYK1 1049 aaKnown RBP22.14■■□□□ 1.13
UBXN1-216ENST00000533908 DBNLQ9UJU6 430 aaKnown RBP22.14■■□□□ 1.13
UBXN1-216ENST00000533908 FLT1P17948 1338 aa22.13■■□□□ 1.13
UBXN1-216ENST00000533908 RLBP1P12271 317 aa22.13■■□□□ 1.13
UBXN1-216ENST00000533908 BACE1P56817 501 aa22.13■■□□□ 1.13
UBXN1-216ENST00000533908 FOXP4Q8IVH2 680 aaPredicted RBP22.13■■□□□ 1.13
UBXN1-216ENST00000533908 MORF4L1Q9UBU8 362 aa22.13■■□□□ 1.13
UBXN1-216ENST00000533908 NOP58Q9Y2X3 529 aaKnown RBP22.13■■□□□ 1.13
UBXN1-216ENST00000533908 CDK5RAP2Q96SN8 1893 aa22.13■■□□□ 1.13
UBXN1-216ENST00000533908 PABPC4Q13310 644 aaKnown RBP eCLIP22.12■■□□□ 1.132e-10■■□□□ 13
UBXN1-216ENST00000533908 OS9Q13438 667 aaPredicted RBP22.12■■□□□ 1.13
UBXN1-216ENST00000533908 POTEEQ6S8J3 1075 aa22.12■■□□□ 1.13
UBXN1-216ENST00000533908 EAF2Q96CJ1 260 aaPredicted RBP22.12■■□□□ 1.13
UBXN1-216ENST00000533908 PAWRQ96IZ0 340 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms