RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 ALDH1L2Q3SY69 923 aa16.12■□□□□ 0.17
COPB1-209ENST00000533096 COPRSQ9NQ92 184 aa16.12■□□□□ 0.17
COPB1-209ENST00000533096 GJD2Q9UKL4 321 aa16.12■□□□□ 0.17
COPB1-209ENST00000533096 AKAP2Q9Y2D5 859 aa16.12■□□□□ 0.17
COPB1-209ENST00000533096 RPTORQ8N122 1335 aa16.12■□□□□ 0.17
COPB1-209ENST00000533096 ZNF316A6NFI3 1004 aaPredicted RBP16.11■□□□□ 0.17
COPB1-209ENST00000533096 USP17L5A8MUK1 530 aa16.11■□□□□ 0.17
COPB1-209ENST00000533096 HMGCRP04035 888 aa16.11■□□□□ 0.17
COPB1-209ENST00000533096 CAPN2P17655 700 aa16.11■□□□□ 0.17
COPB1-209ENST00000533096 CAP2P40123 477 aa16.11■□□□□ 0.17
COPB1-209ENST00000533096 GSTO1P78417 241 aa16.11■□□□□ 0.17
COPB1-209ENST00000533096 MVPQ14764 893 aaKnown RBP16.11■□□□□ 0.17
COPB1-209ENST00000533096 PI16Q6UXB8 463 aa16.11■□□□□ 0.17
COPB1-209ENST00000533096 Q7L0L9 218 aa16.11■□□□□ 0.17
COPB1-209ENST00000533096 CCAR1Q8IX12 1150 aaKnown RBP16.11■□□□□ 0.17
COPB1-209ENST00000533096 DEFB123Q8N688 67 aa16.11■□□□□ 0.17
COPB1-209ENST00000533096 PROCA1Q8NCQ7 364 aaPredicted RBP16.11■□□□□ 0.17
COPB1-209ENST00000533096 P2RX7Q99572 595 aaKnown RBP16.11■□□□□ 0.17
COPB1-209ENST00000533096 MEIS3Q99687 375 aa16.11■□□□□ 0.17
COPB1-209ENST00000533096 OSBPL5Q9H0X9 879 aaPredicted RBP16.11■□□□□ 0.17
COPB1-209ENST00000533096 C11orf49Q9H6J7 331 aa16.11■□□□□ 0.17
COPB1-209ENST00000533096 HMG20BQ9P0W2 317 aa16.11■□□□□ 0.17
COPB1-209ENST00000533096 LRP2BPQ9P2M1 347 aa16.11■□□□□ 0.17
COPB1-209ENST00000533096 TRIOBPQ9H2D6 2365 aa16.11■□□□□ 0.17
COPB1-209ENST00000533096 SRGAP3O43295 1099 aa16.1■□□□□ 0.17
COPB1-209ENST00000533096 TEX11Q8IYF3 940 aa16.1■□□□□ 0.17
COPB1-209ENST00000533096 SPATA5Q8NB90 893 aa16.1■□□□□ 0.17
COPB1-209ENST00000533096 ZNF384Q8TF68 577 aa16.1■□□□□ 0.17
COPB1-209ENST00000533096 GDF15Q99988 308 aa16.1■□□□□ 0.17
COPB1-209ENST00000533096 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.1■□□□□ 0.17
COPB1-209ENST00000533096 IRX3P78415 501 aaPredicted RBP16.09■□□□□ 0.17
COPB1-209ENST00000533096 ANKLE1Q8NAG6 615 aa16.09■□□□□ 0.17
COPB1-209ENST00000533096 SH3RF3Q8TEJ3 882 aaPredicted RBP16.09■□□□□ 0.17
COPB1-209ENST00000533096 NOL10Q9BSC4 688 aaKnown RBP16.09■□□□□ 0.17
COPB1-209ENST00000533096 API5Q9BZZ5 524 aaKnown RBP16.09■□□□□ 0.17
COPB1-209ENST00000533096 UBE2OQ9C0C9 1292 aaKnown RBP16.09■□□□□ 0.17
COPB1-209ENST00000533096 AS3MTQ9HBK9 375 aa16.09■□□□□ 0.17
COPB1-209ENST00000533096 TMOD4Q9NZQ9 345 aa16.09■□□□□ 0.17
COPB1-209ENST00000533096 BMP8BP34820 402 aa16.08■□□□□ 0.16
COPB1-209ENST00000533096 MAGEA10P43363 369 aaPredicted RBP16.08■□□□□ 0.16
COPB1-209ENST00000533096 MTMR2Q13614 643 aa16.08■□□□□ 0.16
COPB1-209ENST00000533096 NSUN4Q96CB9 384 aaKnown RBP16.08■□□□□ 0.16
COPB1-209ENST00000533096 SNRKQ9NRH2 765 aa16.08■□□□□ 0.16
COPB1-209ENST00000533096 PRKAR2AP13861 404 aaKnown RBP16.07■□□□□ 0.16
COPB1-209ENST00000533096 CRACR2BQ8N4Y2 399 aaPredicted RBP16.07■□□□□ 0.16
COPB1-209ENST00000533096 GPRC5AQ8NFJ5 357 aa16.07■□□□□ 0.16
COPB1-209ENST00000533096 TRIB2Q92519 343 aa16.07■□□□□ 0.16
COPB1-209ENST00000533096 NUDT12Q9BQG2 462 aa16.07■□□□□ 0.16
COPB1-209ENST00000533096 TRIM34Q9BYJ4 488 aa16.07■□□□□ 0.16
COPB1-209ENST00000533096 CWC22Q9HCG8 908 aaKnown RBP16.07■□□□□ 0.16
COPB1-209ENST00000533096 CACNA1FO60840 1977 aa16.07■□□□□ 0.16
COPB1-209ENST00000533096 NPM3O75607 178 aaKnown RBP16.06■□□□□ 0.16
COPB1-209ENST00000533096 MNX1P50219 401 aaPredicted RBP16.06■□□□□ 0.16
COPB1-209ENST00000533096 JAG1P78504 1218 aa16.06■□□□□ 0.16
COPB1-209ENST00000533096 G3BP1Q13283 466 aaKnown RBP eCLIP16.06■□□□□ 0.16
COPB1-209ENST00000533096 Q3C1V9 767 aa16.06■□□□□ 0.16
COPB1-209ENST00000533096 MAPKAPK5Q8IW41 473 aa16.06■□□□□ 0.16
COPB1-209ENST00000533096 TGFBRAP1Q8WUH2 860 aa16.06■□□□□ 0.16
COPB1-209ENST00000533096 PAGR1Q9BTK6 254 aa16.06■□□□□ 0.16
COPB1-209ENST00000533096 AATFQ9NY61 560 aaKnown RBP eCLIP16.06■□□□□ 0.16
COPB1-209ENST00000533096 PI4KBQ9UBF8 816 aa16.06■□□□□ 0.16
COPB1-209ENST00000533096 OGDHLQ9ULD0 1010 aa16.06■□□□□ 0.16
COPB1-209ENST00000533096 AK9Q5TCS8 1911 aa16.06■□□□□ 0.16
COPB1-209ENST00000533096 GDF11O95390 407 aa16.05■□□□□ 0.16
COPB1-209ENST00000533096 BAG3O95817 575 aa16.05■□□□□ 0.16
COPB1-209ENST00000533096 BACE1P56817 501 aa16.05■□□□□ 0.16
COPB1-209ENST00000533096 MDM2Q00987 491 aaPredicted RBP16.05■□□□□ 0.16
COPB1-209ENST00000533096 PDE3AQ14432 1141 aa16.05■□□□□ 0.16
COPB1-209ENST00000533096 SH3D19Q5HYK7 790 aa16.05■□□□□ 0.16
COPB1-209ENST00000533096 TBC1D2Q9BYX2 928 aa16.05■□□□□ 0.16
COPB1-209ENST00000533096 TXNRD2Q9NNW7 524 aa16.05■□□□□ 0.16
COPB1-209ENST00000533096 RBPJLQ9UBG7 517 aa16.05■□□□□ 0.16
COPB1-209ENST00000533096 SAP30BPQ9UHR5 308 aaKnown RBP16.05■□□□□ 0.16
COPB1-209ENST00000533096 HERC5Q9UII4 1024 aaKnown RBP16.05■□□□□ 0.16
COPB1-209ENST00000533096 NDUFB9Q9Y6M9 179 aa16.05■□□□□ 0.16
COPB1-209ENST00000533096 CEP290O15078 2479 aa16.04■□□□□ 0.16
COPB1-209ENST00000533096 RFX7Q2KHR2 1363 aa16.04■□□□□ 0.16
COPB1-209ENST00000533096 PDS5AQ29RF7 1337 aaKnown RBP16.04■□□□□ 0.16
COPB1-209ENST00000533096 MAP4K4O95819 1239 aaPredicted RBP16.04■□□□□ 0.16
COPB1-209ENST00000533096 GNAI3P08754 354 aa16.04■□□□□ 0.16
COPB1-209ENST00000533096 CCND3P30281 292 aaPredicted RBP16.04■□□□□ 0.16
COPB1-209ENST00000533096 CACNB2Q08289 660 aaPredicted RBP16.04■□□□□ 0.16
COPB1-209ENST00000533096 CCL14Q16627 93 aa16.04■□□□□ 0.16
COPB1-209ENST00000533096 SHROOM1Q2M3G4 852 aaPredicted RBP16.04■□□□□ 0.16
COPB1-209ENST00000533096 NAA16Q6N069 864 aaPredicted RBP16.04■□□□□ 0.16
COPB1-209ENST00000533096 TDHQ8IZJ6 230 aa16.04■□□□□ 0.16
COPB1-209ENST00000533096 WDR18Q9BV38 432 aa16.04■□□□□ 0.16
COPB1-209ENST00000533096 MORF4L1Q9UBU8 362 aa16.04■□□□□ 0.16
COPB1-209ENST00000533096 PALD1Q9ULE6 856 aa16.04■□□□□ 0.16
COPB1-209ENST00000533096 ZKSCAN1P17029 563 aaPredicted RBP16.03■□□□□ 0.16
COPB1-209ENST00000533096 HERVK_113P62684 666 aa16.03■□□□□ 0.16
COPB1-209ENST00000533096 WDR78Q5VTH9 848 aa16.03■□□□□ 0.16
COPB1-209ENST00000533096 FOXP4Q8IVH2 680 aaPredicted RBP16.03■□□□□ 0.16
COPB1-209ENST00000533096 DHX36Q9H2U1 1008 aaKnown RBP16.03■□□□□ 0.16
COPB1-209ENST00000533096 C19orf81C9J6K1 198 aa16.02■□□□□ 0.16
COPB1-209ENST00000533096 USP17L10C9JJH3 530 aa16.02■□□□□ 0.16
COPB1-209ENST00000533096 ASNSP08243 561 aa16.02■□□□□ 0.16
COPB1-209ENST00000533096 UQCRFS1P1P0C7P4 283 aa16.02■□□□□ 0.16
COPB1-209ENST00000533096 CNGA1P29973 690 aa16.02■□□□□ 0.16
COPB1-209ENST00000533096 HOXA7P31268 230 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms