RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 Q7L0L9 218 aa15.46■□□□□ 0.07
CAPN1-223ENST00000533079 TRMT44Q8IYL2 757 aaKnown RBP15.46■□□□□ 0.07
CAPN1-223ENST00000533079 UBE2OQ9C0C9 1292 aaKnown RBP15.46■□□□□ 0.07
CAPN1-223ENST00000533079 MRS2Q9HD23 443 aa15.46■□□□□ 0.07
CAPN1-223ENST00000533079 CEP126Q9P2H0 1117 aa15.46■□□□□ 0.07
CAPN1-223ENST00000533079 MORF4L1Q9UBU8 362 aa15.46■□□□□ 0.07
CAPN1-223ENST00000533079 GJD2Q9UKL4 321 aa15.46■□□□□ 0.07
CAPN1-223ENST00000533079 SYN1P17600 705 aa15.45■□□□□ 0.06
CAPN1-223ENST00000533079 PICALMQ13492 652 aa15.45■□□□□ 0.06
CAPN1-223ENST00000533079 SH3D19Q5HYK7 790 aa15.45■□□□□ 0.06
CAPN1-223ENST00000533079 FAM109BQ6ICB4 259 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-223ENST00000533079 ZNF280CQ8ND82 737 aa15.45■□□□□ 0.06
CAPN1-223ENST00000533079 DDX4Q9NQI0 724 aaKnown RBP15.45■□□□□ 0.06
CAPN1-223ENST00000533079 CUL9Q8IWT3 2517 aa15.45■□□□□ 0.06
CAPN1-223ENST00000533079 PFASO15067 1338 aa15.44■□□□□ 0.06
CAPN1-223ENST00000533079 MAST2Q6P0Q8 1798 aa15.44■□□□□ 0.06
CAPN1-223ENST00000533079 XRCC5P13010 732 aaKnown RBP15.44■□□□□ 0.06
CAPN1-223ENST00000533079 IL15P40933 162 aaPredicted RBP15.44■□□□□ 0.06
CAPN1-223ENST00000533079 BTDP43251 543 aa15.44■□□□□ 0.06
CAPN1-223ENST00000533079 PHKA1P46020 1223 aa15.44■□□□□ 0.06
CAPN1-223ENST00000533079 MRPL50Q8N5N7 158 aaKnown RBP15.44■□□□□ 0.06
CAPN1-223ENST00000533079 TRIB2Q92519 343 aa15.44■□□□□ 0.06
CAPN1-223ENST00000533079 ASCC2Q9H1I8 757 aaPredicted RBP15.44■□□□□ 0.06
CAPN1-223ENST00000533079 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.44■□□□□ 0.06
CAPN1-223ENST00000533079 AS3MTQ9HBK9 375 aa15.44■□□□□ 0.06
CAPN1-223ENST00000533079 COL6A1P12109 1028 aa15.43■□□□□ 0.06
CAPN1-223ENST00000533079 SPP2Q13103 211 aa15.43■□□□□ 0.06
CAPN1-223ENST00000533079 CCDC102BQ68D86 513 aa15.43■□□□□ 0.06
CAPN1-223ENST00000533079 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.43■□□□□ 0.06
CAPN1-223ENST00000533079 COL25A1Q9BXS0 654 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-223ENST00000533079 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-223ENST00000533079 GPR75-ASB3A0A0A6YYF3 556 aa15.42■□□□□ 0.06
CAPN1-223ENST00000533079 USP17L5A8MUK1 530 aa15.42■□□□□ 0.06
CAPN1-223ENST00000533079 PRKAR2AP13861 404 aaKnown RBP15.42■□□□□ 0.06
CAPN1-223ENST00000533079 CAP2P40123 477 aa15.42■□□□□ 0.06
CAPN1-223ENST00000533079 HMGCS2P54868 508 aa15.42■□□□□ 0.06
CAPN1-223ENST00000533079 RASGRF1Q13972 1273 aa15.42■□□□□ 0.06
CAPN1-223ENST00000533079 CCDC84Q86UT8 332 aaPredicted RBP15.42■□□□□ 0.06
CAPN1-223ENST00000533079 NUDT12Q9BQG2 462 aa15.42■□□□□ 0.06
CAPN1-223ENST00000533079 SIL1Q9H173 461 aa15.42■□□□□ 0.06
CAPN1-223ENST00000533079 ABCF2Q9UG63 623 aa15.42■□□□□ 0.06
CAPN1-223ENST00000533079 HERC5Q9UII4 1024 aaKnown RBP15.42■□□□□ 0.06
CAPN1-223ENST00000533079 HDAC5Q9UQL6 1122 aa15.42■□□□□ 0.06
CAPN1-223ENST00000533079 CCER2I3L3R5 266 aa15.41■□□□□ 0.06
CAPN1-223ENST00000533079 ZKSCAN1P17029 563 aaPredicted RBP15.41■□□□□ 0.06
CAPN1-223ENST00000533079 MAPK4P31152 587 aa15.41■□□□□ 0.06
CAPN1-223ENST00000533079 RHBDL3P58872 404 aa15.41■□□□□ 0.06
CAPN1-223ENST00000533079 IRX3P78415 501 aaPredicted RBP15.41■□□□□ 0.06
CAPN1-223ENST00000533079 GSTO1P78417 241 aa15.41■□□□□ 0.06
CAPN1-223ENST00000533079 TRIM32Q13049 653 aa15.41■□□□□ 0.06
CAPN1-223ENST00000533079 PDE3AQ14432 1141 aa15.41■□□□□ 0.06
CAPN1-223ENST00000533079 GTF3C2Q8WUA4 911 aaPredicted RBP15.41■□□□□ 0.06
CAPN1-223ENST00000533079 VCANP13611 3396 aa15.41■□□□□ 0.06
CAPN1-223ENST00000533079 FRMPD3Q5JV73 1810 aa15.4■□□□□ 0.06
CAPN1-223ENST00000533079 EYSQ5T1H1 3165 aa15.4■□□□□ 0.06
CAPN1-223ENST00000533079 ANP32CO43423 234 aa15.4■□□□□ 0.06
CAPN1-223ENST00000533079 UBTFL1P0CB47 393 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-223ENST00000533079 HOXA7P31268 230 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-223ENST00000533079 ERICH6Q7L0X2 663 aa15.4■□□□□ 0.06
CAPN1-223ENST00000533079 LAMA2P24043 3122 aaKnown RBP15.4■□□□□ 0.06
CAPN1-223ENST00000533079 SLURP2P0DP57 97 aa15.39■□□□□ 0.05
CAPN1-223ENST00000533079 MECOMQ03112 1051 aa15.39■□□□□ 0.05
CAPN1-223ENST00000533079 MVPQ14764 893 aaKnown RBP15.39■□□□□ 0.05
CAPN1-223ENST00000533079 GPRC5AQ8NFJ5 357 aa15.39■□□□□ 0.05
CAPN1-223ENST00000533079 APBA2Q99767 749 aa15.39■□□□□ 0.05
CAPN1-223ENST00000533079 WDR18Q9BV38 432 aa15.39■□□□□ 0.05
CAPN1-223ENST00000533079 TMOD4Q9NZQ9 345 aa15.39■□□□□ 0.05
CAPN1-223ENST00000533079 DOCK3Q8IZD9 2030 aa15.39■□□□□ 0.05
CAPN1-223ENST00000533079 SPTBN5Q9NRC6 3674 aaKnown RBP15.39■□□□□ 0.05
CAPN1-223ENST00000533079 ZNF521Q96K83 1311 aa15.39■□□□□ 0.05
CAPN1-223ENST00000533079 POTEB2H3BUK9 544 aa15.38■□□□□ 0.05
CAPN1-223ENST00000533079 LDHCP07864 332 aa15.38■□□□□ 0.05
CAPN1-223ENST00000533079 ASNSP08243 561 aa15.38■□□□□ 0.05
CAPN1-223ENST00000533079 CYP2B6P20813 491 aa15.38■□□□□ 0.05
CAPN1-223ENST00000533079 RGS2P41220 211 aa15.38■□□□□ 0.05
CAPN1-223ENST00000533079 BACE1P56817 501 aa15.38■□□□□ 0.05
CAPN1-223ENST00000533079 COPRSQ9NQ92 184 aa15.38■□□□□ 0.05
CAPN1-223ENST00000533079 GINM1Q9NU53 330 aa15.38■□□□□ 0.05
CAPN1-223ENST00000533079 AKAP2Q9Y2D5 859 aa15.38■□□□□ 0.05
CAPN1-223ENST00000533079 FAM196BA6NMK8 535 aa15.37■□□□□ 0.05
CAPN1-223ENST00000533079 C19orf81C9J6K1 198 aa15.37■□□□□ 0.05
CAPN1-223ENST00000533079 ADORA1P30542 326 aa15.37■□□□□ 0.05
CAPN1-223ENST00000533079 HERVK_113P62684 666 aa15.37■□□□□ 0.05
CAPN1-223ENST00000533079 CACNB2Q08289 660 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-223ENST00000533079 MTMR2Q13614 643 aa15.37■□□□□ 0.05
CAPN1-223ENST00000533079 LRRC26Q2I0M4 334 aa15.37■□□□□ 0.05
CAPN1-223ENST00000533079 ALDH1L2Q3SY69 923 aa15.37■□□□□ 0.05
CAPN1-223ENST00000533079 USP6NLQ92738 828 aa15.37■□□□□ 0.05
CAPN1-223ENST00000533079 GUCD1Q96NT3 240 aa15.37■□□□□ 0.05
CAPN1-223ENST00000533079 DHX36Q9H2U1 1008 aaKnown RBP15.37■□□□□ 0.05
CAPN1-223ENST00000533079 SIPA1L1O43166 1804 aa15.37■□□□□ 0.05
CAPN1-223ENST00000533079 LTBP2Q14767 1821 aa15.36■□□□□ 0.05
CAPN1-223ENST00000533079 MSCO60682 206 aa15.36■□□□□ 0.05
CAPN1-223ENST00000533079 ERVK-9P63128 1117 aa15.36■□□□□ 0.05
CAPN1-223ENST00000533079 ERVK-24P63145 666 aa15.36■□□□□ 0.05
CAPN1-223ENST00000533079 MDM2Q00987 491 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-223ENST00000533079 ZNF697Q5TEC3 545 aa15.36■□□□□ 0.05
CAPN1-223ENST00000533079 LHX8Q68G74 356 aa15.36■□□□□ 0.05
CAPN1-223ENST00000533079 CCAR1Q8IX12 1150 aaKnown RBP15.36■□□□□ 0.05
CAPN1-223ENST00000533079 SSH1Q8WYL5 1049 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms