RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 MROH2AA6NES4 1674 aa17.93■□□□□ 0.46
PPFIA1-222ENST00000532504 F13A1P00488 732 aa17.93■□□□□ 0.46
PPFIA1-222ENST00000532504 CCDC40Q4G0X9 1142 aa17.93■□□□□ 0.46
PPFIA1-222ENST00000532504 CHURC1Q8WUH1 139 aa17.93■□□□□ 0.46
PPFIA1-222ENST00000532504 ZSCAN10Q96SZ4 725 aaPredicted RBP17.93■□□□□ 0.46
PPFIA1-222ENST00000532504 ATP8A2Q9NTI2 1148 aa17.92■□□□□ 0.46
PPFIA1-222ENST00000532504 CAGE1Q8TC20 777 aa17.92■□□□□ 0.46
PPFIA1-222ENST00000532504 PRDX5P30044 214 aa17.92■□□□□ 0.46
PPFIA1-222ENST00000532504 SIRT2Q8IXJ6 389 aa17.92■□□□□ 0.46
PPFIA1-222ENST00000532504 NOD1Q9Y239 953 aa17.92■□□□□ 0.46
PPFIA1-222ENST00000532504 TNKSO95271 1327 aa17.92■□□□□ 0.46
PPFIA1-222ENST00000532504 SPTLC2O15270 562 aa17.92■□□□□ 0.46
PPFIA1-222ENST00000532504 TRIM21P19474 475 aaKnown RBP17.92■□□□□ 0.46
PPFIA1-222ENST00000532504 ZNF654Q8IZM8 581 aa17.92■□□□□ 0.46
PPFIA1-222ENST00000532504 M0R2C6 588 aa17.91■□□□□ 0.46
PPFIA1-222ENST00000532504 ASIC1P78348 528 aa17.91■□□□□ 0.46
PPFIA1-222ENST00000532504 PNMA1Q8ND90 353 aa17.91■□□□□ 0.46
PPFIA1-222ENST00000532504 GPHNQ9NQX3 736 aaPredicted RBP17.91■□□□□ 0.46
PPFIA1-222ENST00000532504 DDX19AQ9NUU7 478 aaKnown RBP17.91■□□□□ 0.46
PPFIA1-222ENST00000532504 CDHR2Q9BYE9 1310 aa17.91■□□□□ 0.46
PPFIA1-222ENST00000532504 FKBP15Q5T1M5 1219 aa17.91■□□□□ 0.46
PPFIA1-222ENST00000532504 MTIF2P46199 727 aaKnown RBP17.91■□□□□ 0.46
PPFIA1-222ENST00000532504 DTHD1Q6ZMT9 781 aa17.91■□□□□ 0.46
PPFIA1-222ENST00000532504 GINS2Q9Y248 185 aa17.91■□□□□ 0.46
PPFIA1-222ENST00000532504 ARHGAP23Q9P227 1491 aa17.91■□□□□ 0.46
PPFIA1-222ENST00000532504 CYP2D7A0A087X1C5 515 aa17.91■□□□□ 0.46
PPFIA1-222ENST00000532504 PRKCSHP14314 528 aaPredicted RBP17.91■□□□□ 0.46
PPFIA1-222ENST00000532504 PUS7LQ9H0K6 701 aaKnown RBP17.91■□□□□ 0.46
PPFIA1-222ENST00000532504 ADD2P35612 726 aa17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 MCAMP43121 646 aa17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 ADCY7P51828 1080 aa17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 PYM1Q9BRP8 204 aaKnown RBP17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 LRRC27Q9C0I9 530 aa17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 TMEM232C9JQI7 657 aa17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 NOP56O00567 594 aaKnown RBP17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 SLFN13Q68D06 897 aa17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 TDRD3Q9H7E2 651 aaKnown RBP17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 KCNJ14Q9UNX9 436 aa17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 ADCY9O60503 1353 aa17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 POLA2Q14181 598 aa17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 ZMYM1Q5SVZ6 1142 aa17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 RRAGBQ5VZM2 374 aa17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 ARMC9Q7Z3E5 817 aa17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 SERPINB13Q9UIV8 391 aa17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 VWA3AA6NCI4 1184 aa17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 ARID4AP29374 1257 aaPredicted RBP17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 PODNQ7Z5L7 613 aa17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 FAM177A1Q8N128 213 aaPredicted RBP17.9■□□□□ 0.46
PPFIA1-222ENST00000532504 CCNT1O60563 726 aaKnown RBP17.89■□□□□ 0.46
PPFIA1-222ENST00000532504 HSPA4P34932 840 aa17.89■□□□□ 0.46
PPFIA1-222ENST00000532504 CACNA2D4Q7Z3S7 1137 aa17.89■□□□□ 0.46
PPFIA1-222ENST00000532504 NCAPG2Q86XI2 1143 aa17.89■□□□□ 0.46
PPFIA1-222ENST00000532504 IL27Q8NEV9 243 aa17.89■□□□□ 0.46
PPFIA1-222ENST00000532504 DYNLL2Q96FJ2 89 aa17.89■□□□□ 0.46
PPFIA1-222ENST00000532504 FGFR1OPO95684 399 aaKnown RBP17.89■□□□□ 0.45
PPFIA1-222ENST00000532504 USP8P40818 1118 aa17.89■□□□□ 0.45
PPFIA1-222ENST00000532504 SSR1P43307 286 aaKnown RBP17.89■□□□□ 0.45
PPFIA1-222ENST00000532504 NKX1-1Q15270 411 aaPredicted RBP17.89■□□□□ 0.45
PPFIA1-222ENST00000532504 DIS3L2Q8IYB7 885 aaKnown RBP17.89■□□□□ 0.45
PPFIA1-222ENST00000532504 CTAGE5O15320 804 aa17.89■□□□□ 0.45
PPFIA1-222ENST00000532504 COL23A1Q86Y22 540 aaPredicted RBP17.89■□□□□ 0.45
PPFIA1-222ENST00000532504 VPS54Q9P1Q0 977 aa17.89■□□□□ 0.45
PPFIA1-222ENST00000532504 KANK3Q6NY19 840 aa17.89■□□□□ 0.45
PPFIA1-222ENST00000532504 ZNF589Q86UQ0 364 aaPredicted RBP17.89■□□□□ 0.45
PPFIA1-222ENST00000532504 CCDC150Q8NCX0 1101 aa17.89■□□□□ 0.45
PPFIA1-222ENST00000532504 CRKP46108 304 aa17.88■□□□□ 0.45
PPFIA1-222ENST00000532504 BRDTQ58F21 947 aaPredicted RBP17.88■□□□□ 0.45
PPFIA1-222ENST00000532504 OSBP2Q969R2 916 aa17.88■□□□□ 0.45
PPFIA1-222ENST00000532504 SNX21Q969T3 373 aa17.88■□□□□ 0.45
PPFIA1-222ENST00000532504 LUC7LQ9NQ29 371 aaKnown RBP17.88■□□□□ 0.45
PPFIA1-222ENST00000532504 DPEP1P16444 411 aa17.88■□□□□ 0.45
PPFIA1-222ENST00000532504 SP8Q8IXZ3 490 aa17.88■□□□□ 0.45
PPFIA1-222ENST00000532504 MRPS27Q92552 414 aaKnown RBP17.88■□□□□ 0.45
PPFIA1-222ENST00000532504 UBE2HP62256 183 aa17.88■□□□□ 0.45
PPFIA1-222ENST00000532504 SYT1P21579 422 aa17.88■□□□□ 0.45
PPFIA1-222ENST00000532504 TXKP42681 527 aa17.88■□□□□ 0.45
PPFIA1-222ENST00000532504 GLIPR1L2Q4G1C9 344 aa17.88■□□□□ 0.45
PPFIA1-222ENST00000532504 STAP2Q9UGK3 403 aa17.88■□□□□ 0.45
PPFIA1-222ENST00000532504 PABPC4Q13310 644 aaKnown RBP eCLIP17.87■□□□□ 0.45
PPFIA1-222ENST00000532504 KIF22Q14807 665 aa17.87■□□□□ 0.45
PPFIA1-222ENST00000532504 MEGF6O75095 1541 aa17.87■□□□□ 0.45
PPFIA1-222ENST00000532504 SLFNL1Q499Z3 407 aa17.87■□□□□ 0.45
PPFIA1-222ENST00000532504 ZNF34Q8IZ26 560 aa17.87■□□□□ 0.45
PPFIA1-222ENST00000532504 CPLX3Q8WVH0 158 aa17.87■□□□□ 0.45
PPFIA1-222ENST00000532504 KLRF2D3W0D1 207 aa17.87■□□□□ 0.45
PPFIA1-222ENST00000532504 SORBS3O60504 671 aa17.87■□□□□ 0.45
PPFIA1-222ENST00000532504 HSP90AA4PQ58FG1 418 aa17.87■□□□□ 0.45
PPFIA1-222ENST00000532504 MNS1Q8NEH6 495 aa17.87■□□□□ 0.45
PPFIA1-222ENST00000532504 DEPDC5O75140 1603 aa17.87■□□□□ 0.45
PPFIA1-222ENST00000532504 JAK2O60674 1132 aa17.87■□□□□ 0.45
PPFIA1-222ENST00000532504 CNGA1P29973 690 aa17.87■□□□□ 0.45
PPFIA1-222ENST00000532504 TRIM28Q13263 835 aaKnown RBP17.87■□□□□ 0.45
PPFIA1-222ENST00000532504 ANKRD35Q8N283 1001 aa17.87■□□□□ 0.45
PPFIA1-222ENST00000532504 TRIM47Q96LD4 638 aa17.87■□□□□ 0.45
PPFIA1-222ENST00000532504 CCDC173Q0VFZ6 552 aa17.86■□□□□ 0.45
PPFIA1-222ENST00000532504 FAM212AQ96EL1 285 aa17.86■□□□□ 0.45
PPFIA1-222ENST00000532504 LZTS2Q9BRK4 669 aa17.86■□□□□ 0.45
PPFIA1-222ENST00000532504 FAM13AO94988 1023 aa17.86■□□□□ 0.45
PPFIA1-222ENST00000532504 FOXO4P98177 505 aa17.86■□□□□ 0.45
PPFIA1-222ENST00000532504 CNTNAP4Q9C0A0 1308 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms