RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 REM2Q8IYK8 340 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-220ENST00000532375 SDR42E1Q8WUS8 393 aa16.83■□□□□ 0.28
TSPAN4-220ENST00000532375 APPBP2Q92624 585 aa16.83■□□□□ 0.28
TSPAN4-220ENST00000532375 STRBPQ96SI9 672 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-220ENST00000532375 DCP1AQ9NPI6 582 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-220ENST00000532375 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-220ENST00000532375 SAP30BPQ9UHR5 308 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-220ENST00000532375 BAZ2AQ9UIF9 1905 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-220ENST00000532375 CSADQ9Y600 493 aa16.83■□□□□ 0.28
TSPAN4-220ENST00000532375 ZFYP08048 801 aaPredicted RBP16.82■□□□□ 0.28
TSPAN4-220ENST00000532375 USP5P45974 858 aa16.82■□□□□ 0.28
TSPAN4-220ENST00000532375 PLCD1P51178 756 aa16.82■□□□□ 0.28
TSPAN4-220ENST00000532375 JAG1P78504 1218 aa16.82■□□□□ 0.28
TSPAN4-220ENST00000532375 PTPN18Q99952 460 aa16.82■□□□□ 0.28
TSPAN4-220ENST00000532375 CRNKL1Q9BZJ0 848 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-220ENST00000532375 RNF186Q9NXI6 227 aa16.82■□□□□ 0.28
TSPAN4-220ENST00000532375 HERC5Q9UII4 1024 aaKnown RBP16.82■□□□□ 0.28
TSPAN4-220ENST00000532375 NAV1Q8NEY1 1877 aa16.82■□□□□ 0.28
TSPAN4-220ENST00000532375 SMIM22K7EJ46 135 aa16.81■□□□□ 0.28
TSPAN4-220ENST00000532375 IRF6O14896 467 aa16.81■□□□□ 0.28
TSPAN4-220ENST00000532375 CTNND1O60716 968 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-220ENST00000532375 HSPA8P11142 646 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-220ENST00000532375 ZMYM1Q5SVZ6 1142 aa16.81■□□□□ 0.28
TSPAN4-220ENST00000532375 SCYL3Q8IZE3 742 aa16.81■□□□□ 0.28
TSPAN4-220ENST00000532375 EVI5LQ96CN4 794 aa16.81■□□□□ 0.28
TSPAN4-220ENST00000532375 SEC62Q99442 399 aaKnown RBP16.81■□□□□ 0.28
TSPAN4-220ENST00000532375 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.81■□□□□ 0.282e-8■■■■■ 42.5
TSPAN4-220ENST00000532375 DOCK1Q14185 1865 aa16.81■□□□□ 0.28
TSPAN4-220ENST00000532375 ATAD5Q96QE3 1844 aa16.8■□□□□ 0.28
TSPAN4-220ENST00000532375 MANSC4A6NHS7 340 aaPredicted RBP16.8■□□□□ 0.28
TSPAN4-220ENST00000532375 M0R2C6 588 aa16.8■□□□□ 0.28
TSPAN4-220ENST00000532375 IGF2BP3O00425 579 aaKnown RBP eCLIP16.8■□□□□ 0.28
TSPAN4-220ENST00000532375 PTPRAP18433 802 aa16.8■□□□□ 0.28
TSPAN4-220ENST00000532375 INHBEP58166 350 aa16.8■□□□□ 0.28
TSPAN4-220ENST00000532375 PPATQ06203 517 aa16.8■□□□□ 0.28
TSPAN4-220ENST00000532375 GABPAQ06546 454 aa16.8■□□□□ 0.28
TSPAN4-220ENST00000532375 PPIL2Q13356 520 aa16.8■□□□□ 0.28
TSPAN4-220ENST00000532375 OTUD5Q96G74 571 aa16.8■□□□□ 0.28
TSPAN4-220ENST00000532375 EHD4Q9H223 541 aa16.8■□□□□ 0.28
TSPAN4-220ENST00000532375 ATP8A2Q9NTI2 1148 aa16.8■□□□□ 0.28
TSPAN4-220ENST00000532375 KCNH4Q9UQ05 1017 aa16.8■□□□□ 0.28
TSPAN4-220ENST00000532375 GSG1L2A8MUP6 293 aa16.79■□□□□ 0.28
TSPAN4-220ENST00000532375 CAP2P40123 477 aa16.79■□□□□ 0.28
TSPAN4-220ENST00000532375 CTCFP49711 727 aaPredicted RBP16.79■□□□□ 0.28
TSPAN4-220ENST00000532375 MOGSQ13724 837 aa16.79■□□□□ 0.28
TSPAN4-220ENST00000532375 SLC4A8Q2Y0W8 1093 aa16.79■□□□□ 0.28
TSPAN4-220ENST00000532375 TATDN1Q6P1N9 297 aa16.79■□□□□ 0.28
TSPAN4-220ENST00000532375 TICAM2Q86XR7 235 aa16.79■□□□□ 0.28
TSPAN4-220ENST00000532375 BRI3BPQ8WY22 251 aa16.79■□□□□ 0.28
TSPAN4-220ENST00000532375 FSD1Q9BTV5 496 aa16.79■□□□□ 0.28
TSPAN4-220ENST00000532375 SAGE1Q9NXZ1 904 aa16.79■□□□□ 0.28
TSPAN4-220ENST00000532375 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.79■□□□□ 0.28
TSPAN4-220ENST00000532375 TSKSQ9UJT2 592 aa16.79■□□□□ 0.28
TSPAN4-220ENST00000532375 PTPRFP10586 1907 aa16.78■□□□□ 0.28
TSPAN4-220ENST00000532375 FOXP2O15409 715 aa16.78■□□□□ 0.28
TSPAN4-220ENST00000532375 GPAA1O43292 621 aa16.78■□□□□ 0.28
TSPAN4-220ENST00000532375 CA12O43570 354 aa16.78■□□□□ 0.28
TSPAN4-220ENST00000532375 TRPA1O75762 1119 aa16.78■□□□□ 0.28
TSPAN4-220ENST00000532375 CYP2D6P10635 497 aa16.78■□□□□ 0.28
TSPAN4-220ENST00000532375 SHROOM1Q2M3G4 852 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-220ENST00000532375 TTC6Q86TZ1 520 aa16.78■□□□□ 0.28
TSPAN4-220ENST00000532375 IFNL1Q8IU54 200 aa16.78■□□□□ 0.28
TSPAN4-220ENST00000532375 AIDAQ96BJ3 306 aa16.78■□□□□ 0.28
TSPAN4-220ENST00000532375 R3HDMLQ9H3Y0 253 aa16.78■□□□□ 0.28
TSPAN4-220ENST00000532375 MCM9Q9NXL9 1143 aa16.78■□□□□ 0.28
TSPAN4-220ENST00000532375 AFG3L2Q9Y4W6 797 aa16.78■□□□□ 0.28
TSPAN4-220ENST00000532375 SLC4A4Q9Y6R1 1079 aa16.78■□□□□ 0.28
TSPAN4-220ENST00000532375 CASP8AP2Q9UKL3 1982 aa16.77■□□□□ 0.28
TSPAN4-220ENST00000532375 SHMT1P34896 483 aa16.77■□□□□ 0.28
TSPAN4-220ENST00000532375 LBX1P52954 281 aa16.77■□□□□ 0.28
TSPAN4-220ENST00000532375 SREBF2Q12772 1141 aa16.77■□□□□ 0.28
TSPAN4-220ENST00000532375 C12orf60Q5U649 245 aa16.77■□□□□ 0.28
TSPAN4-220ENST00000532375 CCDC84Q86UT8 332 aaPredicted RBP16.77■□□□□ 0.28
TSPAN4-220ENST00000532375 CFHR5Q9BXR6 569 aa16.77■□□□□ 0.28
TSPAN4-220ENST00000532375 EPB41L4AQ9HCS5 686 aaPredicted RBP16.77■□□□□ 0.28
TSPAN4-220ENST00000532375 SERPINB13Q9UIV8 391 aa16.77■□□□□ 0.28
TSPAN4-220ENST00000532375 CYP2D7A0A087X1C5 515 aa16.76■□□□□ 0.27
TSPAN4-220ENST00000532375 USP17L12C9JPN9 530 aa16.76■□□□□ 0.27
TSPAN4-220ENST00000532375 USP17L21D6R901 530 aa16.76■□□□□ 0.27
TSPAN4-220ENST00000532375 HLA-DOAP06340 250 aa16.76■□□□□ 0.27
TSPAN4-220ENST00000532375 GTF2A2P52657 109 aa16.76■□□□□ 0.27
TSPAN4-220ENST00000532375 LRRFIP1Q32MZ4 808 aaKnown RBP16.76■□□□□ 0.27
TSPAN4-220ENST00000532375 CTR9Q6PD62 1173 aa16.76■□□□□ 0.27
TSPAN4-220ENST00000532375 BEGAINQ9BUH8 593 aa16.76■□□□□ 0.27
TSPAN4-220ENST00000532375 PRDM10Q9NQV6 1147 aa16.76■□□□□ 0.27
TSPAN4-220ENST00000532375 ZHX2Q9Y6X8 837 aa16.76■□□□□ 0.27
TSPAN4-220ENST00000532375 CCL15-CCL14A0A0B4J2E2 113 aa16.75■□□□□ 0.27
TSPAN4-220ENST00000532375 CXCL11O14625 94 aa16.75■□□□□ 0.27
TSPAN4-220ENST00000532375 POLR3DP05423 398 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-220ENST00000532375 GSPT1P15170 499 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-220ENST00000532375 CCL15Q16663 113 aa16.75■□□□□ 0.27
TSPAN4-220ENST00000532375 GIMAP6Q6P9H5 292 aa16.75■□□□□ 0.27
TSPAN4-220ENST00000532375 FAM43AQ8N2R8 423 aa16.75■□□□□ 0.27
TSPAN4-220ENST00000532375 CRACR2BQ8N4Y2 399 aaPredicted RBP16.75■□□□□ 0.27
TSPAN4-220ENST00000532375 FAM227BQ96M60 508 aa16.75■□□□□ 0.27
TSPAN4-220ENST00000532375 A0A0D9SFI3 127 aa16.74■□□□□ 0.27
TSPAN4-220ENST00000532375 PATL2C9JE40 543 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-220ENST00000532375 SNAPC2Q13487 334 aa16.74■□□□□ 0.27
TSPAN4-220ENST00000532375 SBK1Q52WX2 424 aa16.74■□□□□ 0.27
TSPAN4-220ENST00000532375 COL13A1Q5TAT6 717 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms