RNA–Protein interactions for RNA: ENST00000527649.1

SORL1-205, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 1,765 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-205ENST00000527649 EXOSC10Q01780 885 aaKnown RBP16.03■□□□□ 0.16
SORL1-205ENST00000527649 CYB5R4Q7L1T6 521 aa16.03■□□□□ 0.16
SORL1-205ENST00000527649 DHX32Q7L7V1 743 aaKnown RBP16.03■□□□□ 0.16
SORL1-205ENST00000527649 AMOTL1Q8IY63 956 aa16.03■□□□□ 0.16
SORL1-205ENST00000527649 SNX21Q969T3 373 aa16.03■□□□□ 0.16
SORL1-205ENST00000527649 TMOD2Q9NZR1 351 aa16.03■□□□□ 0.16
SORL1-205ENST00000527649 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.03■□□□□ 0.16
SORL1-205ENST00000527649 MYO1BO43795 1136 aa16.02■□□□□ 0.15
SORL1-205ENST00000527649 KDM4AO75164 1064 aa16.02■□□□□ 0.15
SORL1-205ENST00000527649 NPM3O75607 178 aaKnown RBP16.02■□□□□ 0.15
SORL1-205ENST00000527649 HMGB1P09429 215 aaKnown RBP16.02■□□□□ 0.15
SORL1-205ENST00000527649 HIRAP54198 1017 aaPredicted RBP16.02■□□□□ 0.15
SORL1-205ENST00000527649 TRDNQ13061 729 aa16.02■□□□□ 0.15
SORL1-205ENST00000527649 DPY19L2Q6NUT2 758 aa16.02■□□□□ 0.15
SORL1-205ENST00000527649 RNF41Q9H4P4 317 aaPredicted RBP16.02■□□□□ 0.15
SORL1-205ENST00000527649 ZC3H4Q9UPT8 1303 aaKnown RBP16.02■□□□□ 0.15
SORL1-205ENST00000527649 ENTPD3O75355 529 aa16.01■□□□□ 0.15
SORL1-205ENST00000527649 CDAN1Q8IWY9 1227 aa16.01■□□□□ 0.15
SORL1-205ENST00000527649 GPHNQ9NQX3 736 aaPredicted RBP16.01■□□□□ 0.15
SORL1-205ENST00000527649 ZSWIM5Q9P217 1185 aa16.01■□□□□ 0.15
SORL1-205ENST00000527649 PRC1O43663 620 aa16■□□□□ 0.15
SORL1-205ENST00000527649 SLC3A2P08195 630 aaKnown RBP16■□□□□ 0.15
SORL1-205ENST00000527649 TOB2Q14106 344 aaPredicted RBP16■□□□□ 0.15
SORL1-205ENST00000527649 Q6ZUG5 572 aa16■□□□□ 0.15
SORL1-205ENST00000527649 C16orf86Q6ZW13 317 aa16■□□□□ 0.15
SORL1-205ENST00000527649 IPO9Q96P70 1041 aaKnown RBP16■□□□□ 0.15
SORL1-205ENST00000527649 KRT23Q9C075 422 aa16■□□□□ 0.15
SORL1-205ENST00000527649 TMEM39BQ9GZU3 492 aa16■□□□□ 0.15
SORL1-205ENST00000527649 CNNM2Q9H8M5 875 aa16■□□□□ 0.15
SORL1-205ENST00000527649 HACL1Q9UJ83 578 aa16■□□□□ 0.15
SORL1-205ENST00000527649 SIPA1L1O43166 1804 aa16■□□□□ 0.15
SORL1-205ENST00000527649 GLTPD2A6NH11 291 aa16■□□□□ 0.15
SORL1-205ENST00000527649 ORC4O43929 436 aa16■□□□□ 0.15
SORL1-205ENST00000527649 LMOD1P29536 600 aaPredicted RBP16■□□□□ 0.15
SORL1-205ENST00000527649 MCM5P33992 734 aa16■□□□□ 0.15
SORL1-205ENST00000527649 CDK8P49336 464 aa16■□□□□ 0.15
SORL1-205ENST00000527649 GABPAQ06546 454 aa16■□□□□ 0.15
SORL1-205ENST00000527649 PDE4BQ07343 736 aa16■□□□□ 0.15
SORL1-205ENST00000527649 FKBP1CQ5VVH2 108 aa16■□□□□ 0.15
SORL1-205ENST00000527649 TTC6Q86TZ1 520 aa16■□□□□ 0.15
SORL1-205ENST00000527649 HSCBQ8IWL3 235 aa16■□□□□ 0.15
SORL1-205ENST00000527649 ZSCAN29Q8IWY8 852 aaPredicted RBP16■□□□□ 0.15
SORL1-205ENST00000527649 L3MBTL3Q96JM7 780 aaPredicted RBP16■□□□□ 0.15
SORL1-205ENST00000527649 ATRNL1Q5VV63 1379 aa15.99■□□□□ 0.15
SORL1-205ENST00000527649 RANBP6O60518 1105 aaKnown RBP15.99■□□□□ 0.15
SORL1-205ENST00000527649 FAM47AQ5JRC9 791 aa15.99■□□□□ 0.15
SORL1-205ENST00000527649 ZKSCAN3Q9BRR0 538 aa15.99■□□□□ 0.15
SORL1-205ENST00000527649 DHX36Q9H2U1 1008 aaKnown RBP15.99■□□□□ 0.15
SORL1-205ENST00000527649 DNAJC18Q9H819 358 aa15.99■□□□□ 0.15
SORL1-205ENST00000527649 FAM196BA6NMK8 535 aa15.98■□□□□ 0.15
SORL1-205ENST00000527649 HLA-DOAP06340 250 aa15.98■□□□□ 0.15
SORL1-205ENST00000527649 PCP11498 1178 aaKnown RBP15.98■□□□□ 0.15
SORL1-205ENST00000527649 BECN1Q14457 450 aa15.98■□□□□ 0.15
SORL1-205ENST00000527649 ANGEL2Q5VTE6 544 aaKnown RBP15.98■□□□□ 0.15
SORL1-205ENST00000527649 FAM151AQ8WW52 585 aa15.98■□□□□ 0.15
SORL1-205ENST00000527649 ESR2Q92731 530 aa15.98■□□□□ 0.15
SORL1-205ENST00000527649 CSRNP1Q96S65 589 aa15.98■□□□□ 0.15
SORL1-205ENST00000527649 ALDH8A1Q9H2A2 487 aaPredicted RBP15.98■□□□□ 0.15
SORL1-205ENST00000527649 ADARB2Q9NS39 739 aaKnown RBP15.98■□□□□ 0.15
SORL1-205ENST00000527649 SERPINB13Q9UIV8 391 aa15.98■□□□□ 0.15
SORL1-205ENST00000527649 COL2A1P02458 1487 aaPredicted RBP15.98■□□□□ 0.15
SORL1-205ENST00000527649 K7ELQ4 463 aaPredicted RBP15.98■□□□□ 0.15
SORL1-205ENST00000527649 RASA1P20936 1047 aa15.98■□□□□ 0.15
SORL1-205ENST00000527649 FAM83AQ86UY5 434 aa15.98■□□□□ 0.15
SORL1-205ENST00000527649 BRF1Q92994 677 aa15.98■□□□□ 0.15
SORL1-205ENST00000527649 MKNK2Q9HBH9 465 aa15.98■□□□□ 0.15
SORL1-205ENST00000527649 SENP2Q9HC62 589 aa15.98■□□□□ 0.15
SORL1-205ENST00000527649 PI4KBQ9UBF8 816 aa15.98■□□□□ 0.15
SORL1-205ENST00000527649 PGAP2Q9UHJ9 254 aa15.98■□□□□ 0.15
SORL1-205ENST00000527649 LARGE1O95461 756 aa15.97■□□□□ 0.15
SORL1-205ENST00000527649 FGD1P98174 961 aa15.97■□□□□ 0.15
SORL1-205ENST00000527649 RASA3Q14644 834 aa15.97■□□□□ 0.15
SORL1-205ENST00000527649 AGXT2Q9BYV1 514 aa15.97■□□□□ 0.15
SORL1-205ENST00000527649 EHD4Q9H223 541 aa15.97■□□□□ 0.15
SORL1-205ENST00000527649 GGA3Q9NZ52 723 aa15.97■□□□□ 0.15
SORL1-205ENST00000527649 TPCN1Q9ULQ1 816 aa15.97■□□□□ 0.15
SORL1-205ENST00000527649 POTECB2RU33 542 aa15.96■□□□□ 0.15
SORL1-205ENST00000527649 NMT2O60551 498 aa15.96■□□□□ 0.15
SORL1-205ENST00000527649 SHMT1P34896 483 aa15.96■□□□□ 0.15
SORL1-205ENST00000527649 IGDCC4Q8TDY8 1250 aa15.96■□□□□ 0.15
SORL1-205ENST00000527649 TMX3Q96JJ7 454 aa15.96■□□□□ 0.15
SORL1-205ENST00000527649 WDR19Q8NEZ3 1342 aa15.96■□□□□ 0.15
SORL1-205ENST00000527649 SH2B2O14492 632 aaPredicted RBP15.95■□□□□ 0.14
SORL1-205ENST00000527649 TFAP4Q01664 338 aa15.95■□□□□ 0.14
SORL1-205ENST00000527649 APOBRQ0VD83 1088 aa15.95■□□□□ 0.14
SORL1-205ENST00000527649 CRACR2BQ8N4Y2 399 aaPredicted RBP15.95■□□□□ 0.14
SORL1-205ENST00000527649 SPRYD3Q8NCJ5 442 aa15.95■□□□□ 0.14
SORL1-205ENST00000527649 TEPSINQ96N21 525 aa15.95■□□□□ 0.14
SORL1-205ENST00000527649 DEFB129Q9H1M3 183 aa15.95■□□□□ 0.14
SORL1-205ENST00000527649 LIMCH1Q9UPQ0 1083 aa15.95■□□□□ 0.14
SORL1-205ENST00000527649 POLR2AP24928 1970 aaKnown RBP15.95■□□□□ 0.14
SORL1-205ENST00000527649 TSPY2A6NKD2 308 aa15.95■□□□□ 0.14
SORL1-205ENST00000527649 IFIT3O14879 490 aaKnown RBP15.95■□□□□ 0.14
SORL1-205ENST00000527649 EPHX2P34913 555 aa15.95■□□□□ 0.14
SORL1-205ENST00000527649 MCM2P49736 904 aa15.95■□□□□ 0.14
SORL1-205ENST00000527649 TNFAIP1Q13829 316 aa15.95■□□□□ 0.14
SORL1-205ENST00000527649 ANKRD1Q15327 319 aa15.95■□□□□ 0.14
SORL1-205ENST00000527649 ME3Q16798 604 aa15.95■□□□□ 0.14
SORL1-205ENST00000527649 TMEM67Q5HYA8 995 aa15.95■□□□□ 0.14
SORL1-205ENST00000527649 METTL16Q86W50 562 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms