RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 USP17L8P0C7I0 530 aa20.09■□□□□ 0.81
PCDHA6-202ENST00000527624 PODXL2Q9NZ53 605 aa20.09■□□□□ 0.81
PCDHA6-202ENST00000527624 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.09■□□□□ 0.81
PCDHA6-202ENST00000527624 FMNL1O95466 1100 aaPredicted RBP20.08■□□□□ 0.81
PCDHA6-202ENST00000527624 MMP10P09238 476 aa20.08■□□□□ 0.81
PCDHA6-202ENST00000527624 ME1P48163 572 aa20.08■□□□□ 0.81
PCDHA6-202ENST00000527624 TMED8Q6PL24 325 aaPredicted RBP20.08■□□□□ 0.81
PCDHA6-202ENST00000527624 OLFM4Q6UX06 510 aa20.08■□□□□ 0.81
PCDHA6-202ENST00000527624 BRAPQ7Z569 592 aa20.08■□□□□ 0.81
PCDHA6-202ENST00000527624 ARPP21Q9UBL0 812 aaPredicted RBP20.08■□□□□ 0.81
PCDHA6-202ENST00000527624 CLIC4Q9Y696 253 aa20.08■□□□□ 0.81
PCDHA6-202ENST00000527624 NID2Q14112 1375 aa20.08■□□□□ 0.81
PCDHA6-202ENST00000527624 FGRP09769 529 aa20.08■□□□□ 0.8
PCDHA6-202ENST00000527624 IL1R1P14778 569 aa20.08■□□□□ 0.8
PCDHA6-202ENST00000527624 IFNAR1P17181 557 aa20.08■□□□□ 0.8
PCDHA6-202ENST00000527624 GUCY1A2P33402 732 aa20.08■□□□□ 0.8
PCDHA6-202ENST00000527624 USP5P45974 858 aa20.08■□□□□ 0.8
PCDHA6-202ENST00000527624 GSTO1P78417 241 aa20.08■□□□□ 0.8
PCDHA6-202ENST00000527624 MYSM1Q5VVJ2 828 aa20.08■□□□□ 0.8
PCDHA6-202ENST00000527624 FANCBQ8NB91 859 aa20.08■□□□□ 0.8
PCDHA6-202ENST00000527624 CCDC39Q9UFE4 941 aa20.08■□□□□ 0.8
PCDHA6-202ENST00000527624 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.08■□□□□ 0.8
PCDHA6-202ENST00000527624 MYH15Q9Y2K3 1946 aa20.08■□□□□ 0.8
PCDHA6-202ENST00000527624 CCDC88AQ3V6T2 1871 aa20.08■□□□□ 0.8
PCDHA6-202ENST00000527624 FAM47AQ5JRC9 791 aa20.07■□□□□ 0.8
PCDHA6-202ENST00000527624 IFIT1BQ5T764 474 aaKnown RBP20.07■□□□□ 0.8
PCDHA6-202ENST00000527624 IQCA1Q86XH1 822 aa20.07■□□□□ 0.8
PCDHA6-202ENST00000527624 CKAP2LQ8IYA6 745 aa20.07■□□□□ 0.8
PCDHA6-202ENST00000527624 FUCA2Q9BTY2 467 aa20.07■□□□□ 0.8
PCDHA6-202ENST00000527624 TNMDQ9H2S6 317 aa20.07■□□□□ 0.8
PCDHA6-202ENST00000527624 RIMBP2O15034 1052 aa20.07■□□□□ 0.8
PCDHA6-202ENST00000527624 NMT2O60551 498 aa20.07■□□□□ 0.8
PCDHA6-202ENST00000527624 SRGNP10124 158 aa20.07■□□□□ 0.8
PCDHA6-202ENST00000527624 PCP11498 1178 aaKnown RBP20.07■□□□□ 0.8
PCDHA6-202ENST00000527624 MAP3K11Q16584 847 aa20.07■□□□□ 0.8
PCDHA6-202ENST00000527624 DDX19AQ9NUU7 478 aaKnown RBP20.07■□□□□ 0.8
PCDHA6-202ENST00000527624 RTEL1Q9NZ71 1219 aa20.07■□□□□ 0.8
PCDHA6-202ENST00000527624 ZKSCAN5Q9Y2L8 839 aa20.07■□□□□ 0.8
PCDHA6-202ENST00000527624 STK36Q9NRP7 1315 aa20.07■□□□□ 0.8
PCDHA6-202ENST00000527624 TRIM29Q14134 588 aa20.06■□□□□ 0.8
PCDHA6-202ENST00000527624 CCAR1Q8IX12 1150 aaKnown RBP20.06■□□□□ 0.8
PCDHA6-202ENST00000527624 SP8Q8IXZ3 490 aa20.06■□□□□ 0.8
PCDHA6-202ENST00000527624 ZNF500O60304 480 aaPredicted RBP20.06■□□□□ 0.8
PCDHA6-202ENST00000527624 BAG3O95817 575 aa20.06■□□□□ 0.8
PCDHA6-202ENST00000527624 SLC3A2P08195 630 aaKnown RBP20.06■□□□□ 0.8
PCDHA6-202ENST00000527624 GNL2Q13823 731 aaKnown RBP20.06■□□□□ 0.8
PCDHA6-202ENST00000527624 SBK1Q52WX2 424 aa20.06■□□□□ 0.8
PCDHA6-202ENST00000527624 MFSD14BQ5SR56 506 aa20.06■□□□□ 0.8
PCDHA6-202ENST00000527624 TRIM22Q8IYM9 498 aa20.06■□□□□ 0.8
PCDHA6-202ENST00000527624 NOL10Q9BSC4 688 aaKnown RBP20.06■□□□□ 0.8
PCDHA6-202ENST00000527624 GOLPH3LQ9H4A5 285 aa20.06■□□□□ 0.8
PCDHA6-202ENST00000527624 CLSTN2Q9H4D0 955 aa20.06■□□□□ 0.8
PCDHA6-202ENST00000527624 ATP6V0A2Q9Y487 856 aa20.06■□□□□ 0.8
PCDHA6-202ENST00000527624 MROH7-TTC4A0A0A0MT08 1334 aa20.05■□□□□ 0.8
PCDHA6-202ENST00000527624 MYH2Q9UKX2 1941 aa20.05■□□□□ 0.8
PCDHA6-202ENST00000527624 CCDC196A0A1B0GTZ2 297 aa20.05■□□□□ 0.8
PCDHA6-202ENST00000527624 ORC4O43929 436 aa20.05■□□□□ 0.8
PCDHA6-202ENST00000527624 STK38Q15208 465 aa20.05■□□□□ 0.8
PCDHA6-202ENST00000527624 NBPF11Q86T75 865 aa20.05■□□□□ 0.8
PCDHA6-202ENST00000527624 TGFBRAP1Q8WUH2 860 aa20.05■□□□□ 0.8
PCDHA6-202ENST00000527624 MKRN1Q9UHC7 482 aaKnown RBP20.05■□□□□ 0.8
PCDHA6-202ENST00000527624 PARP3Q9Y6F1 533 aa20.05■□□□□ 0.8
PCDHA6-202ENST00000527624 ANKRD31Q8N7Z5 1873 aa20.05■□□□□ 0.8
PCDHA6-202ENST00000527624 CRACR2BQ8N4Y2 399 aaPredicted RBP20.04■□□□□ 0.8
PCDHA6-202ENST00000527624 LINC00301Q8NCQ3 95 aa20.04■□□□□ 0.8
PCDHA6-202ENST00000527624 RTFDC1Q9BY42 306 aaPredicted RBP20.04■□□□□ 0.8
PCDHA6-202ENST00000527624 PCDHA7Q9UN72 937 aa20.04■□□□□ 0.8
PCDHA6-202ENST00000527624 LDHCP07864 332 aa20.04■□□□□ 0.8
PCDHA6-202ENST00000527624 NPR1P16066 1061 aa20.04■□□□□ 0.8
PCDHA6-202ENST00000527624 RCAN1P53805 252 aa20.04■□□□□ 0.8
PCDHA6-202ENST00000527624 PDE4BQ07343 736 aa20.04■□□□□ 0.8
PCDHA6-202ENST00000527624 SF3A1Q15459 793 aaKnown RBP20.04■□□□□ 0.8
PCDHA6-202ENST00000527624 TMC4Q7Z404 712 aa20.04■□□□□ 0.8
PCDHA6-202ENST00000527624 CATIPQ7Z7H3 387 aa20.04■□□□□ 0.8
PCDHA6-202ENST00000527624 FLAD1Q8NFF5 587 aa20.04■□□□□ 0.8
PCDHA6-202ENST00000527624 DYNLL2Q96FJ2 89 aa20.04■□□□□ 0.8
PCDHA6-202ENST00000527624 CCDC192P0DO97 292 aa20.03■□□□□ 0.8
PCDHA6-202ENST00000527624 BTDP43251 543 aa20.03■□□□□ 0.8
PCDHA6-202ENST00000527624 MAPKAPK5Q8IW41 473 aa20.03■□□□□ 0.8
PCDHA6-202ENST00000527624 WASF1Q92558 559 aa20.03■□□□□ 0.8
PCDHA6-202ENST00000527624 POLR3EQ9NVU0 708 aa20.03■□□□□ 0.8
PCDHA6-202ENST00000527624 ECM29Q5VYK3 1845 aa20.03■□□□□ 0.8
PCDHA6-202ENST00000527624 OFD1O75665 1012 aa20.03■□□□□ 0.8
PCDHA6-202ENST00000527624 PPP4CP60510 307 aa20.03■□□□□ 0.8
PCDHA6-202ENST00000527624 C12orf60Q5U649 245 aa20.03■□□□□ 0.8
PCDHA6-202ENST00000527624 SAP30BPQ9UHR5 308 aaKnown RBP20.03■□□□□ 0.8
PCDHA6-202ENST00000527624 KCNJ14Q9UNX9 436 aa20.03■□□□□ 0.8
PCDHA6-202ENST00000527624 TSPY2A6NKD2 308 aa20.02■□□□□ 0.8
PCDHA6-202ENST00000527624 GTF2IP78347 998 aa20.02■□□□□ 0.8
PCDHA6-202ENST00000527624 ANO1Q5XXA6 986 aa20.02■□□□□ 0.8
PCDHA6-202ENST00000527624 CCDC73Q6ZRK6 1079 aa20.02■□□□□ 0.8
PCDHA6-202ENST00000527624 FSIP1Q8NA03 581 aa20.02■□□□□ 0.8
PCDHA6-202ENST00000527624 RGS22Q8NE09 1264 aa20.02■□□□□ 0.8
PCDHA6-202ENST00000527624 FBXW7Q969H0 707 aa20.02■□□□□ 0.8
PCDHA6-202ENST00000527624 KIAA1551Q9HCM1 1747 aa20.02■□□□□ 0.8
PCDHA6-202ENST00000527624 SPTLC2O15270 562 aa20.02■□□□□ 0.79
PCDHA6-202ENST00000527624 IGSF3O75054 1194 aa20.02■□□□□ 0.79
PCDHA6-202ENST00000527624 YEATS4O95619 227 aa20.02■□□□□ 0.79
PCDHA6-202ENST00000527624 LAMB1P07942 1786 aa20.01■□□□□ 0.79
PCDHA6-202ENST00000527624 PLEKHA8P1O95397 391 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms