RNA–Protein interactions for RNA: ENST00000527527.1

PITPNM1-210, Transcript of phosphatidylinositol transfer protein membrane associated 1, human

TSL 4

Gene PITPNM1, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PITPNM1-210	ENST00000527527	CDK5RAP2	Q96SN8	1893 aa		28.06	■■■□□ 2.08
PITPNM1-210	ENST00000527527	MS4A1	P11836	297 aa		28.05	■■■□□ 2.08
PITPNM1-210	ENST00000527527	SLC9C1	Q4G0N8	1177 aa		28.05	■■■□□ 2.08
PITPNM1-210	ENST00000527527	FASTKD5	Q7L8L6	764 aa	Known RBP	28.05	■■■□□ 2.08
PITPNM1-210	ENST00000527527	ERC1	Q8IUD2	1116 aa		28.05	■■■□□ 2.08
PITPNM1-210	ENST00000527527	ZNF333	Q96JL9	665 aa		28.05	■■■□□ 2.08
PITPNM1-210	ENST00000527527	DYNLL1	P63167	89 aa	Known RBP	28.04	■■■□□ 2.08
PITPNM1-210	ENST00000527527	TRIM47	Q96LD4	638 aa		28.04	■■■□□ 2.08
PITPNM1-210	ENST00000527527	ANTXR1	Q9H6X2	564 aa		28.04	■■■□□ 2.08
PITPNM1-210	ENST00000527527	FLT1	P17948	1338 aa		28.03	■■■□□ 2.08
PITPNM1-210	ENST00000527527	IDH1	O75874	414 aa	Known RBP	28.03	■■■□□ 2.08
PITPNM1-210	ENST00000527527	PLCG2	P16885	1265 aa		28.03	■■■□□ 2.08
PITPNM1-210	ENST00000527527	CYP7A1	P22680	504 aa		28.03	■■■□□ 2.08
PITPNM1-210	ENST00000527527	PSMC4	P43686	418 aa		28.03	■■■□□ 2.08
PITPNM1-210	ENST00000527527	RCAN3	Q9UKA8	241 aa		28.03	■■■□□ 2.08
PITPNM1-210	ENST00000527527	ATAD5	Q96QE3	1844 aa		28.03	■■■□□ 2.08
PITPNM1-210	ENST00000527527	RBBP6	Q7Z6E9	1792 aa	Known RBP	28.03	■■■□□ 2.08
PITPNM1-210	ENST00000527527	APBB1	O00213	710 aa		28.02	■■■□□ 2.08
PITPNM1-210	ENST00000527527	BCR	P11274	1271 aa		28.02	■■■□□ 2.08
PITPNM1-210	ENST00000527527	CAP2	P40123	477 aa		28.02	■■■□□ 2.08
PITPNM1-210	ENST00000527527	SIRT2	Q8IXJ6	389 aa		28.02	■■■□□ 2.08
PITPNM1-210	ENST00000527527	RHPN1	Q8TCX5	695 aa		28.02	■■■□□ 2.08
PITPNM1-210	ENST00000527527	SH3TC2	Q8TF17	1288 aa		28.02	■■■□□ 2.08
PITPNM1-210	ENST00000527527	ZBTB40	Q9NUA8	1239 aa		28.02	■■■□□ 2.08
PITPNM1-210	ENST00000527527	DDX19B	Q9UMR2	479 aa		28.02	■■■□□ 2.08
PITPNM1-210	ENST00000527527	KIAA0100	Q14667	2235 aa	Known RBP	28.02	■■■□□ 2.08
PITPNM1-210	ENST00000527527	FOCAD	Q5VW36	1801 aa		28.02	■■■□□ 2.08
PITPNM1-210	ENST00000527527	MYC	P01106	439 aa	Predicted RBP	28.01	■■■□□ 2.07
PITPNM1-210	ENST00000527527	MIGA1	Q8NAN2	632 aa		28.01	■■■□□ 2.07
PITPNM1-210	ENST00000527527	PI4KB	Q9UBF8	816 aa		28.01	■■■□□ 2.07
PITPNM1-210	ENST00000527527	HERC5	Q9UII4	1024 aa	Known RBP	28.01	■■■□□ 2.07
PITPNM1-210	ENST00000527527	PALD1	Q9ULE6	856 aa		28.01	■■■□□ 2.07
PITPNM1-210	ENST00000527527	FMNL1	O95466	1100 aa	Predicted RBP	28	■■■□□ 2.07
PITPNM1-210	ENST00000527527	GNRH1	P01148	92 aa		28	■■■□□ 2.07
PITPNM1-210	ENST00000527527	EN2	P19622	333 aa	Predicted RBP	28	■■■□□ 2.07
PITPNM1-210	ENST00000527527	OSBP	P22059	807 aa		28	■■■□□ 2.07
PITPNM1-210	ENST00000527527	SLC4A8	Q2Y0W8	1093 aa		28	■■■□□ 2.07
PITPNM1-210	ENST00000527527	MAGEB6	Q8N7X4	407 aa		28	■■■□□ 2.07
PITPNM1-210	ENST00000527527	DHX36	Q9H2U1	1008 aa	Known RBP	28	■■■□□ 2.07
PITPNM1-210	ENST00000527527	DNAJC18	Q9H819	358 aa		28	■■■□□ 2.07
PITPNM1-210	ENST00000527527	SAP30BP	Q9UHR5	308 aa	Known RBP	28	■■■□□ 2.07
PITPNM1-210	ENST00000527527	SPP2	Q13103	211 aa		27.99	■■■□□ 2.07
PITPNM1-210	ENST00000527527	HSP90AB4P	Q58FF6	505 aa		27.99	■■■□□ 2.07
PITPNM1-210	ENST00000527527	TREML2	Q5T2D2	321 aa		27.99	■■■□□ 2.07
PITPNM1-210	ENST00000527527	NBPF11	Q86T75	865 aa		27.99	■■■□□ 2.07
PITPNM1-210	ENST00000527527	RPAP2	Q8IXW5	612 aa	Predicted RBP	27.99	■■■□□ 2.07
PITPNM1-210	ENST00000527527	SRRD	Q9UH36	339 aa		27.99	■■■□□ 2.07
PITPNM1-210	ENST00000527527	BRCA2	P51587	3418 aa		27.99	■■■□□ 2.07
PITPNM1-210	ENST00000527527	JAG1	P78504	1218 aa		27.98	■■■□□ 2.07
PITPNM1-210	ENST00000527527	BCL11A	Q9H165	835 aa		27.98	■■■□□ 2.07
PITPNM1-210	ENST00000527527	AGTPBP1	Q9UPW5	1226 aa		27.98	■■■□□ 2.07
PITPNM1-210	ENST00000527527	SLC45A1	Q9Y2W3	748 aa		27.98	■■■□□ 2.07
PITPNM1-210	ENST00000527527	IGSF3	O75054	1194 aa		27.97	■■■□□ 2.07
PITPNM1-210	ENST00000527527	PRMT2	P55345	433 aa		27.97	■■■□□ 2.07
PITPNM1-210	ENST00000527527	SHROOM1	Q2M3G4	852 aa	Predicted RBP	27.97	■■■□□ 2.07
PITPNM1-210	ENST00000527527	C20orf194	Q5TEA3	1177 aa		27.97	■■■□□ 2.07
PITPNM1-210	ENST00000527527	ZNF280C	Q8ND82	737 aa		27.97	■■■□□ 2.07
PITPNM1-210	ENST00000527527	TMEM106C	Q9BVX2	250 aa		27.97	■■■□□ 2.07
PITPNM1-210	ENST00000527527	MKI67	P46013	3256 aa	Known RBP	27.96	■■■□□ 2.07
PITPNM1-210	ENST00000527527	USP17L5	A8MUK1	530 aa		27.96	■■■□□ 2.07
PITPNM1-210	ENST00000527527	KIF1BP	Q96EK5	621 aa		27.96	■■■□□ 2.07
PITPNM1-210	ENST00000527527	LOC285556	D6RIA3	1793 aa		27.96	■■■□□ 2.07
PITPNM1-210	ENST00000527527	MYPN	Q86TC9	1320 aa		27.95	■■■□□ 2.07
PITPNM1-210	ENST00000527527	HMMR	O75330	724 aa		27.95	■■■□□ 2.06
PITPNM1-210	ENST00000527527	HMGCS2	P54868	508 aa		27.95	■■■□□ 2.06
PITPNM1-210	ENST00000527527	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	27.95	■■■□□ 2.06
PITPNM1-210	ENST00000527527	SMCR8	Q8TEV9	937 aa	Predicted RBP	27.95	■■■□□ 2.06
PITPNM1-210	ENST00000527527	MGAM	O43451	1857 aa		27.94	■■■□□ 2.06
PITPNM1-210	ENST00000527527	HOXD10	P28358	340 aa		27.94	■■■□□ 2.06
PITPNM1-210	ENST00000527527	FCGRT	P55899	365 aa		27.94	■■■□□ 2.06
PITPNM1-210	ENST00000527527	PRKCZ	Q05513	592 aa		27.94	■■■□□ 2.06
PITPNM1-210	ENST00000527527	MAP3K12	Q12852	859 aa		27.94	■■■□□ 2.06
PITPNM1-210	ENST00000527527	PRPF38B	Q5VTL8	546 aa	Known RBP	27.94	■■■□□ 2.06
PITPNM1-210	ENST00000527527	METTL16	Q86W50	562 aa	Known RBP	27.94	■■■□□ 2.06
PITPNM1-210	ENST00000527527	CLASRP	Q8N2M8	674 aa	Known RBP	27.94	■■■□□ 2.06
PITPNM1-210	ENST00000527527	GDF11	O95390	407 aa		27.93	■■■□□ 2.06
PITPNM1-210	ENST00000527527	FOXP4	Q8IVH2	680 aa	Predicted RBP	27.93	■■■□□ 2.06
PITPNM1-210	ENST00000527527	PROCA1	Q8NCQ7	364 aa	Predicted RBP	27.93	■■■□□ 2.06
PITPNM1-210	ENST00000527527	RAET1E	Q8TD07	263 aa		27.93	■■■□□ 2.06
PITPNM1-210	ENST00000527527	TBC1D2	Q9BYX2	928 aa		27.93	■■■□□ 2.06
PITPNM1-210	ENST00000527527	USP5	P45974	858 aa		27.92	■■■□□ 2.06
PITPNM1-210	ENST00000527527	TRIM34	Q9BYJ4	488 aa		27.92	■■■□□ 2.06
PITPNM1-210	ENST00000527527	GABRQ	Q9UN88	632 aa		27.92	■■■□□ 2.06
PITPNM1-210	ENST00000527527	MYH1	P12882	1939 aa		27.91	■■■□□ 2.06
PITPNM1-210	ENST00000527527	HLA-DOA	P06340	250 aa		27.91	■■■□□ 2.06
PITPNM1-210	ENST00000527527	IFIT2	P09913	472 aa	Known RBP	27.91	■■■□□ 2.06
PITPNM1-210	ENST00000527527	MTFR1	Q15390	333 aa		27.91	■■■□□ 2.06
PITPNM1-210	ENST00000527527	ANKRD13C	Q8N6S4	541 aa		27.91	■■■□□ 2.06
PITPNM1-210	ENST00000527527	AS3MT	Q9HBK9	375 aa		27.91	■■■□□ 2.06
PITPNM1-210	ENST00000527527	ASNS	P08243	561 aa		27.9	■■■□□ 2.06
PITPNM1-210	ENST00000527527	GRK4	P32298	578 aa		27.9	■■■□□ 2.06
PITPNM1-210	ENST00000527527	MTMR2	Q13614	643 aa		27.9	■■■□□ 2.06
PITPNM1-210	ENST00000527527	SH3D19	Q5HYK7	790 aa		27.9	■■■□□ 2.06
PITPNM1-210	ENST00000527527	EDC3	Q96F86	508 aa	Known RBP	27.9	■■■□□ 2.06
PITPNM1-210	ENST00000527527	DNAJC2	Q99543	621 aa	Known RBP	27.9	■■■□□ 2.06
PITPNM1-210	ENST00000527527	GOLIM4	O00461	696 aa		27.89	■■■□□ 2.06
PITPNM1-210	ENST00000527527	RAB11FIP3	O75154	756 aa		27.89	■■■□□ 2.06
PITPNM1-210	ENST00000527527	RIOK1	Q9BRS2	568 aa	Known RBP	27.89	■■■□□ 2.06
PITPNM1-210	ENST00000527527	WDR18	Q9BV38	432 aa		27.89	■■■□□ 2.06
PITPNM1-210	ENST00000527527	PNMA3	Q9UL41	463 aa		27.89	■■■□□ 2.06

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms