RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 PIEZO1Q92508 2521 aa13.54□□□□□ -0.24
NEDD8-204ENST00000526430 GNAI3P08754 354 aa13.54□□□□□ -0.24
NEDD8-204ENST00000526430 MAP3K21Q5TCX8 1036 aa13.54□□□□□ -0.24
NEDD8-204ENST00000526430 FAM151AQ8WW52 585 aa13.54□□□□□ -0.24
NEDD8-204ENST00000526430 ZNF594Q96JF6 807 aaPredicted RBP13.54□□□□□ -0.24
NEDD8-204ENST00000526430 FAM84BQ96KN1 310 aaPredicted RBP13.54□□□□□ -0.24
NEDD8-204ENST00000526430 MAST3O60307 1309 aa13.54□□□□□ -0.24
NEDD8-204ENST00000526430 PNMA6EA0A0J9YXQ4 647 aa13.53□□□□□ -0.24
NEDD8-204ENST00000526430 GYG1P46976 350 aa13.53□□□□□ -0.24
NEDD8-204ENST00000526430 ATP8B2P98198 1209 aa13.53□□□□□ -0.24
NEDD8-204ENST00000526430 LRRC26Q2I0M4 334 aa13.53□□□□□ -0.24
NEDD8-204ENST00000526430 MYLIPQ8WY64 445 aa13.53□□□□□ -0.24
NEDD8-204ENST00000526430 LBHD1Q9BQE6 289 aaPredicted RBP13.53□□□□□ -0.24
NEDD8-204ENST00000526430 PUS3Q9BZE2 481 aaKnown RBP13.53□□□□□ -0.24
NEDD8-204ENST00000526430 DDX19BQ9UMR2 479 aa13.53□□□□□ -0.24
NEDD8-204ENST00000526430 SUGT1Q9Y2Z0 365 aa13.53□□□□□ -0.24
NEDD8-204ENST00000526430 MYH2Q9UKX2 1941 aa13.52□□□□□ -0.24
NEDD8-204ENST00000526430 GNAI2P04899 355 aa13.52□□□□□ -0.25
NEDD8-204ENST00000526430 FOSL2P15408 326 aa13.52□□□□□ -0.25
NEDD8-204ENST00000526430 POLA2Q14181 598 aa13.52□□□□□ -0.25
NEDD8-204ENST00000526430 HHIPL2Q6UWX4 724 aa13.52□□□□□ -0.25
NEDD8-204ENST00000526430 ANKRD13CQ8N6S4 541 aa13.52□□□□□ -0.25
NEDD8-204ENST00000526430 KLHDC4Q8TBB5 520 aa13.52□□□□□ -0.25
NEDD8-204ENST00000526430 GJD2Q9UKL4 321 aa13.52□□□□□ -0.25
NEDD8-204ENST00000526430 AFG3L2Q9Y4W6 797 aa13.52□□□□□ -0.25
NEDD8-204ENST00000526430 ATRNL1Q5VV63 1379 aa13.51□□□□□ -0.25
NEDD8-204ENST00000526430 SYNGAP1Q96PV0 1343 aa13.51□□□□□ -0.25
NEDD8-204ENST00000526430 TMEM265A0A087WTH1 108 aa13.51□□□□□ -0.25
NEDD8-204ENST00000526430 SMAD3P84022 425 aaKnown RBP13.51□□□□□ -0.25
NEDD8-204ENST00000526430 TRIM32Q13049 653 aa13.51□□□□□ -0.25
NEDD8-204ENST00000526430 CEP85Q6P2H3 762 aa13.51□□□□□ -0.25
NEDD8-204ENST00000526430 LDHAL6AQ6ZMR3 332 aa13.51□□□□□ -0.25
NEDD8-204ENST00000526430 GADL1Q6ZQY3 521 aa13.51□□□□□ -0.25
NEDD8-204ENST00000526430 SCYL3Q8IZE3 742 aa13.51□□□□□ -0.25
NEDD8-204ENST00000526430 EXOC6Q8TAG9 804 aa13.51□□□□□ -0.25
NEDD8-204ENST00000526430 TRIB2Q92519 343 aa13.51□□□□□ -0.25
NEDD8-204ENST00000526430 TTYH1Q9H313 450 aaPredicted RBP13.51□□□□□ -0.25
NEDD8-204ENST00000526430 PNMA3Q9UL41 463 aa13.51□□□□□ -0.25
NEDD8-204ENST00000526430 AGTPBP1Q9UPW5 1226 aa13.51□□□□□ -0.25
NEDD8-204ENST00000526430 ARIH1Q9Y4X5 557 aaPredicted RBP13.51□□□□□ -0.25
NEDD8-204ENST00000526430 PCDHB15Q9Y5E8 787 aa13.51□□□□□ -0.25
NEDD8-204ENST00000526430 ZHX2Q9Y6X8 837 aa13.51□□□□□ -0.25
NEDD8-204ENST00000526430 PTPRAP18433 802 aa13.5□□□□□ -0.25
NEDD8-204ENST00000526430 IRX6P78412 446 aaPredicted RBP13.5□□□□□ -0.25
NEDD8-204ENST00000526430 ATG9AQ7Z3C6 839 aa13.5□□□□□ -0.25
NEDD8-204ENST00000526430 SSH3Q8TE77 659 aa13.5□□□□□ -0.25
NEDD8-204ENST00000526430 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.5□□□□□ -0.25
NEDD8-204ENST00000526430 PHF20L1A8MW92 1017 aa13.49□□□□□ -0.25
NEDD8-204ENST00000526430 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
NEDD8-204ENST00000526430 GCLCP48506 637 aaPredicted RBP13.49□□□□□ -0.25
NEDD8-204ENST00000526430 MAP3K12Q12852 859 aa13.49□□□□□ -0.25
NEDD8-204ENST00000526430 CCDC57Q2TAC2 916 aa13.49□□□□□ -0.25
NEDD8-204ENST00000526430 LRRC24Q50LG9 513 aa13.49□□□□□ -0.25
NEDD8-204ENST00000526430 FBXO33Q7Z6M2 555 aa13.49□□□□□ -0.25
NEDD8-204ENST00000526430 COPRSQ9NQ92 184 aa13.49□□□□□ -0.25
NEDD8-204ENST00000526430 PICK1Q9NRD5 415 aa13.49□□□□□ -0.25
NEDD8-204ENST00000526430 CNNM1Q9NRU3 951 aa13.49□□□□□ -0.25
NEDD8-204ENST00000526430 PA2G4Q9UQ80 394 aaKnown RBP13.49□□□□□ -0.25
NEDD8-204ENST00000526430 XRCC5P13010 732 aaKnown RBP13.48□□□□□ -0.25
NEDD8-204ENST00000526430 LHX8Q68G74 356 aa13.48□□□□□ -0.25
NEDD8-204ENST00000526430 TRMT44Q8IYL2 757 aaKnown RBP13.48□□□□□ -0.25
NEDD8-204ENST00000526430 CHMP3Q9Y3E7 222 aa13.48□□□□□ -0.25
NEDD8-204ENST00000526430 SRGAP3O43295 1099 aa13.47□□□□□ -0.25
NEDD8-204ENST00000526430 CHAF1AQ13111 956 aaPredicted RBP13.47□□□□□ -0.25
NEDD8-204ENST00000526430 TAF7LQ5H9L4 462 aa13.47□□□□□ -0.25
NEDD8-204ENST00000526430 VPS37DQ86XT2 251 aa13.47□□□□□ -0.25
NEDD8-204ENST00000526430 VGLL2Q8N8G2 317 aa13.47□□□□□ -0.25
NEDD8-204ENST00000526430 PROCA1Q8NCQ7 364 aaPredicted RBP13.47□□□□□ -0.25
NEDD8-204ENST00000526430 HDAC5Q9UQL6 1122 aa13.47□□□□□ -0.25
NEDD8-204ENST00000526430 TCF20Q9UGU0 1960 aaKnown RBP13.46□□□□□ -0.25
NEDD8-204ENST00000526430 MAP3K10Q02779 954 aa13.46□□□□□ -0.25
NEDD8-204ENST00000526430 TCP10Q12799 353 aa13.46□□□□□ -0.25
NEDD8-204ENST00000526430 SHHQ15465 462 aa13.46□□□□□ -0.25
NEDD8-204ENST00000526430 RPAP2Q8IXW5 612 aaPredicted RBP13.46□□□□□ -0.25
NEDD8-204ENST00000526430 ATXN2LQ8WWM7 1075 aaKnown RBP13.46□□□□□ -0.25
NEDD8-204ENST00000526430 SOCS4Q8WXH5 440 aa13.46□□□□□ -0.25
NEDD8-204ENST00000526430 PRKAG2Q9UGJ0 569 aa13.46□□□□□ -0.25
NEDD8-204ENST00000526430 IQSEC3Q9UPP2 1182 aaPredicted RBP13.46□□□□□ -0.25
NEDD8-204ENST00000526430 NOP58Q9Y2X3 529 aaKnown RBP13.46□□□□□ -0.25
NEDD8-204ENST00000526430 EYA2O00167 538 aa13.45□□□□□ -0.26
NEDD8-204ENST00000526430 FRAT2O75474 233 aaPredicted RBP13.45□□□□□ -0.26
NEDD8-204ENST00000526430 NFIAQ12857 509 aa13.45□□□□□ -0.26
NEDD8-204ENST00000526430 CAVIN4Q5BKX8 364 aa13.45□□□□□ -0.26
NEDD8-204ENST00000526430 TREML2Q5T2D2 321 aa13.45□□□□□ -0.26
NEDD8-204ENST00000526430 CDC42EP5Q6NZY7 148 aa13.45□□□□□ -0.26
NEDD8-204ENST00000526430 USP38Q8NB14 1042 aa13.45□□□□□ -0.26
NEDD8-204ENST00000526430 MORF4L1Q9UBU8 362 aa13.45□□□□□ -0.26
NEDD8-204ENST00000526430 FAM198AQ9UFP1 575 aa13.45□□□□□ -0.26
NEDD8-204ENST00000526430 MROH5Q6ZUA9 1318 aa13.44□□□□□ -0.26
NEDD8-204ENST00000526430 TRIM75PA6NK02 468 aa13.44□□□□□ -0.26
NEDD8-204ENST00000526430 CTNND1O60716 968 aaKnown RBP13.44□□□□□ -0.26
NEDD8-204ENST00000526430 CACNB2Q08289 660 aaPredicted RBP13.44□□□□□ -0.26
NEDD8-204ENST00000526430 C9orf50Q5SZB4 431 aa13.44□□□□□ -0.26
NEDD8-204ENST00000526430 DAGLAQ9Y4D2 1042 aa13.44□□□□□ -0.26
NEDD8-204ENST00000526430 MUC6Q6W4X9 2439 aa13.44□□□□□ -0.26
NEDD8-204ENST00000526430 PLXNA1Q9UIW2 1896 aa13.44□□□□□ -0.26
NEDD8-204ENST00000526430 CIAO1O76071 339 aa13.43□□□□□ -0.26
NEDD8-204ENST00000526430 CENPBP07199 599 aaPredicted RBP13.43□□□□□ -0.26
NEDD8-204ENST00000526430 ZKSCAN1P17029 563 aaPredicted RBP13.43□□□□□ -0.26
NEDD8-204ENST00000526430 PABPC4Q13310 644 aaKnown RBP eCLIP13.43□□□□□ -0.268e-9■■□□□ 13.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms