RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 PSMD1Q99460 953 aa11.31□□□□□ -0.6
USP35-201ENST00000526425 TMX4Q9H1E5 349 aaPredicted RBP11.31□□□□□ -0.6
USP35-201ENST00000526425 ZSCAN16Q9H4T2 348 aaPredicted RBP11.31□□□□□ -0.6
USP35-201ENST00000526425 CRYBG1Q9Y4K1 1723 aa11.31□□□□□ -0.6
USP35-201ENST00000526425 CYP2D7A0A087X1C5 515 aa11.31□□□□□ -0.6
USP35-201ENST00000526425 WTIPA6NIX2 430 aaPredicted RBP11.31□□□□□ -0.6
USP35-201ENST00000526425 HMGB2P26583 209 aaKnown RBP11.31□□□□□ -0.6
USP35-201ENST00000526425 ZNF772Q68DY9 489 aaPredicted RBP11.31□□□□□ -0.6
USP35-201ENST00000526425 DZIP1Q86YF9 867 aaKnown RBP11.31□□□□□ -0.6
USP35-201ENST00000526425 DDX19AQ9NUU7 478 aaKnown RBP11.31□□□□□ -0.6
USP35-201ENST00000526425 IRAK4Q9NWZ3 460 aa11.31□□□□□ -0.6
USP35-201ENST00000526425 WTAPQ15007 396 aa11.31□□□□□ -0.6
USP35-201ENST00000526425 NAA16Q6N069 864 aaPredicted RBP11.31□□□□□ -0.6
USP35-201ENST00000526425 RIPOR2Q9Y4F9 1068 aa11.31□□□□□ -0.6
USP35-201ENST00000526425 PFKFB2O60825 505 aa11.3□□□□□ -0.6
USP35-201ENST00000526425 CSF1RP07333 972 aa11.3□□□□□ -0.6
USP35-201ENST00000526425 MROH5Q6ZUA9 1318 aa11.3□□□□□ -0.6
USP35-201ENST00000526425 CALRP27797 417 aaKnown RBP11.3□□□□□ -0.6
USP35-201ENST00000526425 SSRP1Q08945 709 aaKnown RBP11.3□□□□□ -0.6
USP35-201ENST00000526425 CNBD1Q8NA66 436 aa11.3□□□□□ -0.6
USP35-201ENST00000526425 TRMT1Q9NXH9 659 aaKnown RBP11.3□□□□□ -0.6
USP35-201ENST00000526425 NARFQ9UHQ1 456 aa11.3□□□□□ -0.6
USP35-201ENST00000526425 ANGEL1Q9UNK9 670 aaKnown RBP11.3□□□□□ -0.6
USP35-201ENST00000526425 ABCA3Q99758 1704 aa11.3□□□□□ -0.6
USP35-201ENST00000526425 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.3□□□□□ -0.6
USP35-201ENST00000526425 MAGEB6P1A0A0J9YX57 407 aa11.3□□□□□ -0.6
USP35-201ENST00000526425 CDKL5O76039 1030 aa11.3□□□□□ -0.6
USP35-201ENST00000526425 RPGRQ92834 1020 aaKnown RBP11.3□□□□□ -0.6
USP35-201ENST00000526425 GPR101Q96P66 508 aaPredicted RBP11.3□□□□□ -0.6
USP35-201ENST00000526425 KCNJ14Q9UNX9 436 aa11.3□□□□□ -0.6
USP35-201ENST00000526425 MRVI1Q9Y6F6 885 aa11.3□□□□□ -0.6
USP35-201ENST00000526425 PES1O00541 588 aaKnown RBP11.29□□□□□ -0.6
USP35-201ENST00000526425 ADD2P35612 726 aa11.29□□□□□ -0.6
USP35-201ENST00000526425 USP5P45974 858 aa11.29□□□□□ -0.6
USP35-201ENST00000526425 ATP2B2Q01814 1243 aa11.29□□□□□ -0.6
USP35-201ENST00000526425 GIMAP7Q8NHV1 300 aa11.29□□□□□ -0.6
USP35-201ENST00000526425 RRP15Q9Y3B9 282 aaKnown RBP11.29□□□□□ -0.6
USP35-201ENST00000526425 F8W031 263 aaPredicted RBP11.29□□□□□ -0.6
USP35-201ENST00000526425 CLSTN1O94985 981 aa11.29□□□□□ -0.6
USP35-201ENST00000526425 DYNLL1P63167 89 aaKnown RBP11.29□□□□□ -0.6
USP35-201ENST00000526425 TBC1D9BQ66K14 1250 aa11.29□□□□□ -0.6
USP35-201ENST00000526425 LCORLQ8N3X6 602 aa11.29□□□□□ -0.6
USP35-201ENST00000526425 ANKRD7Q92527 254 aa11.29□□□□□ -0.6
USP35-201ENST00000526425 ARHGEF1Q92888 912 aaKnown RBP11.29□□□□□ -0.6
USP35-201ENST00000526425 CCDC34Q96HJ3 373 aa11.29□□□□□ -0.6
USP35-201ENST00000526425 AATFQ9NY61 560 aaKnown RBP eCLIP11.29□□□□□ -0.6
USP35-201ENST00000526425 TCHHQ07283 1943 aa11.29□□□□□ -0.6
USP35-201ENST00000526425 APBA3O96018 575 aa11.29□□□□□ -0.6
USP35-201ENST00000526425 TPM4P67936 248 aa11.29□□□□□ -0.6
USP35-201ENST00000526425 TBC1D10CQ8IV04 446 aa11.29□□□□□ -0.6
USP35-201ENST00000526425 IFNL3Q8IZI9 196 aa11.29□□□□□ -0.6
USP35-201ENST00000526425 MICALL1Q8N3F8 863 aa11.29□□□□□ -0.6
USP35-201ENST00000526425 C5P01031 1676 aa11.29□□□□□ -0.6
USP35-201ENST00000526425 C6orf229H3BNL8 230 aa11.28□□□□□ -0.6
USP35-201ENST00000526425 KMT5BQ4FZB7 885 aa11.28□□□□□ -0.6
USP35-201ENST00000526425 ARMC3Q5W041 872 aa11.28□□□□□ -0.6
USP35-201ENST00000526425 CCAR2Q8N163 923 aaKnown RBP11.28□□□□□ -0.6
USP35-201ENST00000526425 FAM200AQ8TCP9 573 aa11.28□□□□□ -0.6
USP35-201ENST00000526425 CNTNAP4Q9C0A0 1308 aa11.28□□□□□ -0.6
USP35-201ENST00000526425 SPTLC2O15270 562 aa11.28□□□□□ -0.6
USP35-201ENST00000526425 PTGS1P23219 599 aa11.28□□□□□ -0.6
USP35-201ENST00000526425 RTN1Q16799 776 aa11.28□□□□□ -0.6
USP35-201ENST00000526425 RC3H1Q5TC82 1133 aaKnown RBP11.28□□□□□ -0.6
USP35-201ENST00000526425 CCDC186Q7Z3E2 898 aa11.28□□□□□ -0.6
USP35-201ENST00000526425 SENP2Q9HC62 589 aa11.28□□□□□ -0.6
USP35-201ENST00000526425 CLIC4Q9Y696 253 aa11.28□□□□□ -0.6
USP35-201ENST00000526425 MORC2Q9Y6X9 1032 aaPredicted RBP11.28□□□□□ -0.6
USP35-201ENST00000526425 RBM6P78332 1123 aaKnown RBP11.28□□□□□ -0.6
USP35-201ENST00000526425 ST5P78524 1137 aa11.28□□□□□ -0.6
USP35-201ENST00000526425 FRMD3A2A2Y4 597 aa11.27□□□□□ -0.6
USP35-201ENST00000526425 LEKR1Q6ZMV7 388 aa11.27□□□□□ -0.6
USP35-201ENST00000526425 CYB5R4Q7L1T6 521 aa11.27□□□□□ -0.6
USP35-201ENST00000526425 CEP57L1Q8IYX8 460 aa11.27□□□□□ -0.6
USP35-201ENST00000526425 TXLNBQ8N3L3 684 aa11.27□□□□□ -0.6
USP35-201ENST00000526425 AOPEPQ8N6M6 819 aa11.27□□□□□ -0.6
USP35-201ENST00000526425 ZNF397Q8NF99 534 aaPredicted RBP11.27□□□□□ -0.6
USP35-201ENST00000526425 MRPS27Q92552 414 aaKnown RBP11.27□□□□□ -0.6
USP35-201ENST00000526425 PGBD1Q96JS3 809 aa11.27□□□□□ -0.6
USP35-201ENST00000526425 CBX8Q9HC52 389 aa11.27□□□□□ -0.6
USP35-201ENST00000526425 DONSONQ9NYP3 566 aa11.27□□□□□ -0.6
USP35-201ENST00000526425 ADAMTS7Q9UKP4 1686 aa11.27□□□□□ -0.6
USP35-201ENST00000526425 BAZ2BQ9UIF8 2168 aaKnown RBP11.27□□□□□ -0.61
USP35-201ENST00000526425 TSPY2A6NKD2 308 aa11.27□□□□□ -0.61
USP35-201ENST00000526425 RBM5P52756 815 aaKnown RBP eCLIP11.27□□□□□ -0.61
USP35-201ENST00000526425 PLEKHA4Q9H4M7 779 aa11.27□□□□□ -0.61
USP35-201ENST00000526425 CLIP2Q9UDT6 1046 aa11.27□□□□□ -0.61
USP35-201ENST00000526425 ZNF215Q9UL58 517 aaPredicted RBP11.27□□□□□ -0.61
USP35-201ENST00000526425 NTSR2O95665 410 aa11.27□□□□□ -0.61
USP35-201ENST00000526425 SCP2P22307 547 aa11.27□□□□□ -0.61
USP35-201ENST00000526425 RXRBP28702 533 aa11.27□□□□□ -0.61
USP35-201ENST00000526425 CYP2C19P33261 490 aa11.27□□□□□ -0.61
USP35-201ENST00000526425 RPS8P62241 208 aaKnown RBP11.27□□□□□ -0.61
USP35-201ENST00000526425 RESTQ13127 1097 aa11.27□□□□□ -0.61
USP35-201ENST00000526425 BMS1Q14692 1282 aaKnown RBP11.27□□□□□ -0.61
USP35-201ENST00000526425 FAM47AQ5JRC9 791 aa11.27□□□□□ -0.61
USP35-201ENST00000526425 AMOTL1Q8IY63 956 aa11.27□□□□□ -0.61
USP35-201ENST00000526425 CELF1Q92879 486 aaKnown RBP11.27□□□□□ -0.61
USP35-201ENST00000526425 MKNK2Q9HBH9 465 aa11.27□□□□□ -0.61
USP35-201ENST00000526425 SLC3A2P08195 630 aaKnown RBP11.26□□□□□ -0.61
USP35-201ENST00000526425 SF3B2Q13435 895 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms