RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 GOLGA8KD6RF30 607 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 PES1O00541 588 aaKnown RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 ENC1O14682 589 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 MEFVO15553 781 aaPredicted RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 SHOX2O60902 331 aaPredicted RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 HSF2BPO75031 334 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 GCFC2P16383 781 aaKnown RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 PDE4BQ07343 736 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 ACTN3Q08043 901 aaPredicted RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 PDCLQ13371 301 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 CWF19L2Q2TBE0 894 aaKnown RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 TUBB8Q3ZCM7 444 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 TTC39AQ5SRH9 613 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 RALYLQ86SE5 291 aaKnown RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 TMTC1Q8IUR5 882 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 TEX11Q8IYF3 940 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 NOC3LQ8WTT2 800 aaKnown RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 CCDC114Q96M63 670 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 GJB4Q9NTQ9 266 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 WWC3Q9ULE0 1092 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 NEDD4P46934 1319 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 MFAP3LO75121 409 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 ERCC3P19447 782 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 CASP14P31944 242 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 ATP1A2P50993 1020 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 STX17P56962 302 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 POSTNQ15063 836 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 SPECC1Q5M775 1068 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 RASGRP2Q7LDG7 609 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 KIAA1328Q86T90 577 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 METTL16Q86W50 562 aaKnown RBP5.31□□□□□ -1.56
HIPK3-204ENST00000525975 EGFL6Q8IUX8 553 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 KLHDC4Q8TBB5 520 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 ENOX1Q8TC92 643 aaKnown RBP5.31□□□□□ -1.56
HIPK3-204ENST00000525975 ZKSCAN4Q969J2 545 aaPredicted RBP5.31□□□□□ -1.56
HIPK3-204ENST00000525975 CTAGE1Q96RT6 745 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 A1CFQ9NQ94 594 aaKnown RBP5.31□□□□□ -1.56
HIPK3-204ENST00000525975 KLC4Q9NSK0 619 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 SAR1BQ9Y6B6 198 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 SETD1AO15047 1707 aaKnown RBP5.31□□□□□ -1.56
HIPK3-204ENST00000525975 TESPA1A2RU30 521 aaPredicted RBP5.31□□□□□ -1.56
HIPK3-204ENST00000525975 TMCO5BA8MYB1 307 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 E7EWF7 191 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 TEX33O43247 280 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 FDPSP14324 419 aaKnown RBP5.31□□□□□ -1.56
HIPK3-204ENST00000525975 CDC27P30260 824 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 KIF23Q02241 960 aaPredicted RBP5.31□□□□□ -1.56
HIPK3-204ENST00000525975 FMR1Q06787 632 aaKnown RBP eCLIP5.31□□□□□ -1.56
HIPK3-204ENST00000525975 CCDC40Q4G0X9 1142 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 SHC4Q6S5L8 630 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 CYP26C1Q6V0L0 522 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 CCDC121Q6ZUS5 278 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 AMOTL1Q8IY63 956 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 CCDC51Q96ER9 411 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 RPGRIP1Q96KN7 1286 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 EYA1Q99502 592 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 HINFPQ9BQA5 517 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 JADE2Q9NQC1 790 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 MAN1B1Q9UKM7 699 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 XRN1Q8IZH2 1706 aaKnown RBP5.31□□□□□ -1.56
HIPK3-204ENST00000525975 CPS1P31327 1500 aa5.31□□□□□ -1.56
HIPK3-204ENST00000525975 SALL1Q9NSC2 1324 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 GRM8O00222 908 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 N4BP3O15049 544 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 C21orf2O43822 256 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 PAX7P23759 505 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 AIMP1Q12904 312 aaKnown RBP5.3□□□□□ -1.56
HIPK3-204ENST00000525975 SNCBQ16143 134 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 NBPF14Q5TI25 921 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 NAIF1Q69YI7 327 aaPredicted RBP5.3□□□□□ -1.56
HIPK3-204ENST00000525975 VPS37DQ86XT2 251 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 ALG1Q9BT22 464 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 TEX13AQ9BXU3 409 aaPredicted RBP5.3□□□□□ -1.56
HIPK3-204ENST00000525975 DLC1Q96QB1 1528 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 SYNRGQ9UMZ2 1314 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 KIF28PB7ZC32 967 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 KIF3CO14782 793 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 FOXN1O15353 648 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 PPP6R2O75170 966 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 FSBPO95073 299 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 DDX58O95786 925 aaKnown RBP5.3□□□□□ -1.56
HIPK3-204ENST00000525975 GCKP35557 465 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 CCT6AP40227 531 aaKnown RBP5.3□□□□□ -1.56
HIPK3-204ENST00000525975 HAND2P61296 217 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 DDR1Q08345 913 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 FAM69CQ0P6D2 419 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 E2F5Q15329 346 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 PREPLQ4J6C6 727 aaPredicted RBP5.3□□□□□ -1.56
HIPK3-204ENST00000525975 CCDC122Q5T0U0 273 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 CADPS2Q86UW7 1296 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 KRI1Q8N9T8 703 aaKnown RBP5.3□□□□□ -1.56
HIPK3-204ENST00000525975 EHBP1Q8NDI1 1231 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 IL17REQ8NFR9 667 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 SUCLG2Q96I99 432 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 HDAC6Q9UBN7 1215 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 DBF4Q9UBU7 674 aaPredicted RBP5.3□□□□□ -1.56
HIPK3-204ENST00000525975 MCM8Q9UJA3 840 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 FAM184BQ9ULE4 1060 aa5.3□□□□□ -1.56
HIPK3-204ENST00000525975 MYO5BQ9ULV0 1848 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms