RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 COG6Q9Y2V7 657 aa11.56□□□□□ -0.56
SF3B2-204ENST00000525207 FLT1P17948 1338 aa11.56□□□□□ -0.56
SF3B2-204ENST00000525207 TNRC18O15417 2968 aaPredicted RBP11.55□□□□□ -0.56
SF3B2-204ENST00000525207 BRCA2P51587 3418 aa11.55□□□□□ -0.56
SF3B2-204ENST00000525207 PDHXO00330 501 aa11.55□□□□□ -0.56
SF3B2-204ENST00000525207 LACTBP83111 547 aaPredicted RBP11.55□□□□□ -0.56
SF3B2-204ENST00000525207 HSP90AB4PQ58FF6 505 aa11.55□□□□□ -0.56
SF3B2-204ENST00000525207 AACSQ86V21 672 aa11.55□□□□□ -0.56
SF3B2-204ENST00000525207 RHPN1Q8TCX5 695 aa11.55□□□□□ -0.56
SF3B2-204ENST00000525207 ARMC5Q96C12 935 aa11.55□□□□□ -0.56
SF3B2-204ENST00000525207 PARK7Q99497 189 aaKnown RBP11.55□□□□□ -0.56
SF3B2-204ENST00000525207 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.55□□□□□ -0.56
SF3B2-204ENST00000525207 ZBTB40Q9NUA8 1239 aa11.55□□□□□ -0.56
SF3B2-204ENST00000525207 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.55□□□□□ -0.56
SF3B2-204ENST00000525207 AFG3L2Q9Y4W6 797 aa11.55□□□□□ -0.56
SF3B2-204ENST00000525207 ZHX2Q9Y6X8 837 aa11.55□□□□□ -0.56
SF3B2-204ENST00000525207 ABCB7O75027 752 aa11.54□□□□□ -0.56
SF3B2-204ENST00000525207 HMMRO75330 724 aa11.54□□□□□ -0.56
SF3B2-204ENST00000525207 BAG3O95817 575 aa11.54□□□□□ -0.56
SF3B2-204ENST00000525207 PPP4CP60510 307 aa11.54□□□□□ -0.56
SF3B2-204ENST00000525207 GPAT2Q6NUI2 795 aa11.54□□□□□ -0.56
SF3B2-204ENST00000525207 C17orf99Q6UX52 265 aa11.54□□□□□ -0.56
SF3B2-204ENST00000525207 SIRT2Q8IXJ6 389 aa11.54□□□□□ -0.56
SF3B2-204ENST00000525207 RPAP2Q8IXW5 612 aaPredicted RBP11.54□□□□□ -0.56
SF3B2-204ENST00000525207 ARHGAP39Q9C0H5 1083 aa11.54□□□□□ -0.56
SF3B2-204ENST00000525207 IL1RAPL2Q9NP60 686 aa11.54□□□□□ -0.56
SF3B2-204ENST00000525207 HERC5Q9UII4 1024 aaKnown RBP11.54□□□□□ -0.56
SF3B2-204ENST00000525207 PTCH2Q9Y6C5 1203 aa11.54□□□□□ -0.56
SF3B2-204ENST00000525207 IDH1O75874 414 aaKnown RBP11.53□□□□□ -0.56
SF3B2-204ENST00000525207 ARHGEF6Q15052 776 aa11.53□□□□□ -0.56
SF3B2-204ENST00000525207 CCDC84Q86UT8 332 aaPredicted RBP11.53□□□□□ -0.56
SF3B2-204ENST00000525207 KIF1BPQ96EK5 621 aa11.53□□□□□ -0.56
SF3B2-204ENST00000525207 DHX36Q9H2U1 1008 aaKnown RBP11.53□□□□□ -0.56
SF3B2-204ENST00000525207 ANTXR1Q9H6X2 564 aa11.53□□□□□ -0.56
SF3B2-204ENST00000525207 DNAJC18Q9H819 358 aa11.53□□□□□ -0.56
SF3B2-204ENST00000525207 CPA4Q9UI42 421 aa11.53□□□□□ -0.56
SF3B2-204ENST00000525207 NDUFB9Q9Y6M9 179 aa11.53□□□□□ -0.56
SF3B2-204ENST00000525207 TRIM75PA6NK02 468 aa11.52□□□□□ -0.57
SF3B2-204ENST00000525207 CYP7A1P22680 504 aa11.52□□□□□ -0.57
SF3B2-204ENST00000525207 CTGFP29279 349 aa11.52□□□□□ -0.57
SF3B2-204ENST00000525207 CAP2P40123 477 aa11.52□□□□□ -0.57
SF3B2-204ENST00000525207 KIF22Q14807 665 aa11.52□□□□□ -0.57
SF3B2-204ENST00000525207 C20orf194Q5TEA3 1177 aa11.52□□□□□ -0.57
SF3B2-204ENST00000525207 GADL1Q6ZQY3 521 aa11.52□□□□□ -0.57
SF3B2-204ENST00000525207 FASTKD5Q7L8L6 764 aaKnown RBP11.52□□□□□ -0.57
SF3B2-204ENST00000525207 CERS3Q8IU89 383 aa11.52□□□□□ -0.57
SF3B2-204ENST00000525207 MAPKAPK5Q8IW41 473 aa11.52□□□□□ -0.57
SF3B2-204ENST00000525207 CLASRPQ8N2M8 674 aaKnown RBP11.52□□□□□ -0.57
SF3B2-204ENST00000525207 TGFBRAP1Q8WUH2 860 aa11.52□□□□□ -0.57
SF3B2-204ENST00000525207 ZNF333Q96JL9 665 aa11.52□□□□□ -0.57
SF3B2-204ENST00000525207 CHMP4BQ9H444 224 aaKnown RBP11.52□□□□□ -0.57
SF3B2-204ENST00000525207 PI4KBQ9UBF8 816 aa11.52□□□□□ -0.57
SF3B2-204ENST00000525207 SLC45A1Q9Y2W3 748 aa11.52□□□□□ -0.57
SF3B2-204ENST00000525207 MYH8P13535 1937 aa11.51□□□□□ -0.57
SF3B2-204ENST00000525207 GNRH1P01148 92 aa11.51□□□□□ -0.57
SF3B2-204ENST00000525207 CYP2C8P10632 490 aa11.51□□□□□ -0.57
SF3B2-204ENST00000525207 BCRP11274 1271 aa11.51□□□□□ -0.57
SF3B2-204ENST00000525207 DYNLL1P63167 89 aaKnown RBP11.51□□□□□ -0.57
SF3B2-204ENST00000525207 PDE3AQ14432 1141 aa11.51□□□□□ -0.57
SF3B2-204ENST00000525207 RRP1BQ14684 758 aaKnown RBP11.51□□□□□ -0.57
SF3B2-204ENST00000525207 SLC9C1Q4G0N8 1177 aa11.51□□□□□ -0.57
SF3B2-204ENST00000525207 TMED8Q6PL24 325 aaPredicted RBP11.51□□□□□ -0.57
SF3B2-204ENST00000525207 METTL16Q86W50 562 aaKnown RBP11.51□□□□□ -0.57
SF3B2-204ENST00000525207 MAGEB6Q8N7X4 407 aa11.51□□□□□ -0.57
SF3B2-204ENST00000525207 MIGA1Q8NAN2 632 aa11.51□□□□□ -0.57
SF3B2-204ENST00000525207 TBC1D2Q9BYX2 928 aa11.51□□□□□ -0.57
SF3B2-204ENST00000525207 AGTPBP1Q9UPW5 1226 aa11.51□□□□□ -0.57
SF3B2-204ENST00000525207 POTEFA5A3E0 1075 aa11.5□□□□□ -0.57
SF3B2-204ENST00000525207 APBB1O00213 710 aa11.5□□□□□ -0.57
SF3B2-204ENST00000525207 RAB11FIP3O75154 756 aa11.5□□□□□ -0.57
SF3B2-204ENST00000525207 PRMT2P55345 433 aa11.5□□□□□ -0.57
SF3B2-204ENST00000525207 MAP3K12Q12852 859 aa11.5□□□□□ -0.57
SF3B2-204ENST00000525207 PROCA1Q8NCQ7 364 aaPredicted RBP11.5□□□□□ -0.57
SF3B2-204ENST00000525207 ZNF280CQ8ND82 737 aa11.5□□□□□ -0.57
SF3B2-204ENST00000525207 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.5□□□□□ -0.57
SF3B2-204ENST00000525207 TRIM47Q96LD4 638 aa11.5□□□□□ -0.57
SF3B2-204ENST00000525207 PALD1Q9ULE6 856 aa11.5□□□□□ -0.57
SF3B2-204ENST00000525207 MKI67P46013 3256 aaKnown RBP11.5□□□□□ -0.57
SF3B2-204ENST00000525207 DOCK3Q8IZD9 2030 aa11.49□□□□□ -0.57
SF3B2-204ENST00000525207 HLA-DOAP06340 250 aa11.49□□□□□ -0.57
SF3B2-204ENST00000525207 ASNSP08243 561 aa11.49□□□□□ -0.57
SF3B2-204ENST00000525207 IFIT2P09913 472 aaKnown RBP11.49□□□□□ -0.57
SF3B2-204ENST00000525207 OSBPP22059 807 aa11.49□□□□□ -0.57
SF3B2-204ENST00000525207 DSG3P32926 999 aa11.49□□□□□ -0.57
SF3B2-204ENST00000525207 PSMC4P43686 418 aa11.49□□□□□ -0.57
SF3B2-204ENST00000525207 TTF1Q15361 905 aaPredicted RBP11.49□□□□□ -0.57
SF3B2-204ENST00000525207 TREML2Q5T2D2 321 aa11.49□□□□□ -0.57
SF3B2-204ENST00000525207 CRACR2BQ8N4Y2 399 aaPredicted RBP11.49□□□□□ -0.57
SF3B2-204ENST00000525207 SMCR8Q8TEV9 937 aaPredicted RBP11.49□□□□□ -0.57
SF3B2-204ENST00000525207 RIOK1Q9BRS2 568 aaKnown RBP11.49□□□□□ -0.57
SF3B2-204ENST00000525207 SRRDQ9UH36 339 aa11.49□□□□□ -0.57
SF3B2-204ENST00000525207 SAP30BPQ9UHR5 308 aaKnown RBP11.49□□□□□ -0.57
SF3B2-204ENST00000525207 PNMA3Q9UL41 463 aa11.49□□□□□ -0.57
SF3B2-204ENST00000525207 BAZ2AQ9UIF9 1905 aaKnown RBP11.48□□□□□ -0.57
SF3B2-204ENST00000525207 USP17L5A8MUK1 530 aa11.48□□□□□ -0.57
SF3B2-204ENST00000525207 ECM2O94769 699 aaPredicted RBP11.48□□□□□ -0.57
SF3B2-204ENST00000525207 GDF11O95390 407 aa11.48□□□□□ -0.57
SF3B2-204ENST00000525207 PDE6AP16499 860 aa11.48□□□□□ -0.57
SF3B2-204ENST00000525207 HMGCS2P54868 508 aa11.48□□□□□ -0.57
SF3B2-204ENST00000525207 SPP2Q13103 211 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms