RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 WBP1LQ9NX94 342 aa18.18■□□□□ 0.5
SF3B2-202ENST00000524475 CTNND1O60716 968 aaKnown RBP18.17■□□□□ 0.5
SF3B2-202ENST00000524475 GNAT2P19087 354 aa18.17■□□□□ 0.5
SF3B2-202ENST00000524475 INPP5BP32019 993 aa18.17■□□□□ 0.5
SF3B2-202ENST00000524475 GRM1Q13255 1194 aa18.17■□□□□ 0.5
SF3B2-202ENST00000524475 ERO1BQ86YB8 467 aa18.17■□□□□ 0.5
SF3B2-202ENST00000524475 PALD1Q9ULE6 856 aa18.17■□□□□ 0.5
SF3B2-202ENST00000524475 INHBEP58166 350 aa18.16■□□□□ 0.5
SF3B2-202ENST00000524475 KIF23Q02241 960 aaPredicted RBP18.16■□□□□ 0.5
SF3B2-202ENST00000524475 PPATQ06203 517 aa18.16■□□□□ 0.5
SF3B2-202ENST00000524475 SDR42E1Q8WUS8 393 aa18.16■□□□□ 0.5
SF3B2-202ENST00000524475 ZKSCAN4Q969J2 545 aaPredicted RBP18.16■□□□□ 0.5
SF3B2-202ENST00000524475 ELP3Q9H9T3 547 aa18.16■□□□□ 0.5
SF3B2-202ENST00000524475 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.16■□□□□ 0.5
SF3B2-202ENST00000524475 GINM1Q9NU53 330 aa18.16■□□□□ 0.5
SF3B2-202ENST00000524475 BAZ2AQ9UIF9 1905 aaKnown RBP18.15■□□□□ 0.5
SF3B2-202ENST00000524475 MANSC4A6NHS7 340 aaPredicted RBP18.15■□□□□ 0.5
SF3B2-202ENST00000524475 TRIM6-TRIM34B2RNG4 842 aa18.15■□□□□ 0.5
SF3B2-202ENST00000524475 GPAA1O43292 621 aa18.15■□□□□ 0.5
SF3B2-202ENST00000524475 CA12O43570 354 aa18.15■□□□□ 0.5
SF3B2-202ENST00000524475 GJA5P36382 358 aa18.15■□□□□ 0.5
SF3B2-202ENST00000524475 TM4SF4P48230 202 aa18.15■□□□□ 0.5
SF3B2-202ENST00000524475 SREBF2Q12772 1141 aa18.15■□□□□ 0.5
SF3B2-202ENST00000524475 PPIL2Q13356 520 aa18.15■□□□□ 0.5
SF3B2-202ENST00000524475 TTC22Q5TAA0 569 aa18.15■□□□□ 0.5
SF3B2-202ENST00000524475 SCYL3Q8IZE3 742 aa18.15■□□□□ 0.5
SF3B2-202ENST00000524475 OPTNQ96CV9 577 aa18.15■□□□□ 0.5
SF3B2-202ENST00000524475 DDRGK1Q96HY6 314 aa18.15■□□□□ 0.5
SF3B2-202ENST00000524475 ZIC5Q96T25 663 aa18.15■□□□□ 0.5
SF3B2-202ENST00000524475 DNAJC18Q9H819 358 aa18.15■□□□□ 0.5
SF3B2-202ENST00000524475 HELLSQ9NRZ9 838 aa18.15■□□□□ 0.5
SF3B2-202ENST00000524475 SAP30BPQ9UHR5 308 aaKnown RBP18.15■□□□□ 0.5
SF3B2-202ENST00000524475 SERPINB13Q9UIV8 391 aa18.15■□□□□ 0.5
SF3B2-202ENST00000524475 SLC4A4Q9Y6R1 1079 aa18.15■□□□□ 0.5
SF3B2-202ENST00000524475 ATAD5Q96QE3 1844 aa18.14■□□□□ 0.5
SF3B2-202ENST00000524475 TESPA1A2RU30 521 aaPredicted RBP18.14■□□□□ 0.49
SF3B2-202ENST00000524475 M0R2C6 588 aa18.14■□□□□ 0.49
SF3B2-202ENST00000524475 GABPAQ06546 454 aa18.14■□□□□ 0.49
SF3B2-202ENST00000524475 CCDC136Q96JN2 1154 aa18.14■□□□□ 0.49
SF3B2-202ENST00000524475 TBC1D2Q9BYX2 928 aa18.14■□□□□ 0.49
SF3B2-202ENST00000524475 MCM9Q9NXL9 1143 aa18.14■□□□□ 0.49
SF3B2-202ENST00000524475 HIP1O00291 1037 aa18.13■□□□□ 0.49
SF3B2-202ENST00000524475 PRKAB2O43741 272 aa18.13■□□□□ 0.49
SF3B2-202ENST00000524475 HSPA1AP0DMV8 641 aaKnown RBP18.13■□□□□ 0.49
SF3B2-202ENST00000524475 HSPA1BP0DMV9 641 aaKnown RBP18.13■□□□□ 0.49
SF3B2-202ENST00000524475 CAP2P40123 477 aa18.13■□□□□ 0.49
SF3B2-202ENST00000524475 TATDN1Q6P1N9 297 aa18.13■□□□□ 0.49
SF3B2-202ENST00000524475 CRACR2BQ8N4Y2 399 aaPredicted RBP18.13■□□□□ 0.49
SF3B2-202ENST00000524475 SAGE1Q9NXZ1 904 aa18.13■□□□□ 0.49
SF3B2-202ENST00000524475 ARPP21Q9UBL0 812 aaPredicted RBP18.13■□□□□ 0.49
SF3B2-202ENST00000524475 PHIPQ8WWQ0 1821 aa18.13■□□□□ 0.49
SF3B2-202ENST00000524475 GSG1L2A8MUP6 293 aa18.12■□□□□ 0.49
SF3B2-202ENST00000524475 POLR3DP05423 398 aaPredicted RBP18.12■□□□□ 0.49
SF3B2-202ENST00000524475 GSPT1P15170 499 aaKnown RBP18.12■□□□□ 0.49
SF3B2-202ENST00000524475 PLCD1P51178 756 aa18.12■□□□□ 0.49
SF3B2-202ENST00000524475 GTF2A2P52657 109 aa18.12■□□□□ 0.49
SF3B2-202ENST00000524475 SBK1Q52WX2 424 aa18.12■□□□□ 0.49
SF3B2-202ENST00000524475 AMOTL1Q8IY63 956 aa18.12■□□□□ 0.49
SF3B2-202ENST00000524475 RILPL2Q969X0 211 aa18.12■□□□□ 0.49
SF3B2-202ENST00000524475 MS4A4AQ96JQ5 239 aa18.12■□□□□ 0.49
SF3B2-202ENST00000524475 BEGAINQ9BUH8 593 aa18.12■□□□□ 0.49
SF3B2-202ENST00000524475 TRIM34Q9BYJ4 488 aa18.12■□□□□ 0.49
SF3B2-202ENST00000524475 PICK1Q9NRD5 415 aa18.12■□□□□ 0.49
SF3B2-202ENST00000524475 KCNH4Q9UQ05 1017 aa18.12■□□□□ 0.49
SF3B2-202ENST00000524475 FAM196BA6NMK8 535 aa18.11■□□□□ 0.49
SF3B2-202ENST00000524475 SLURP2P0DP57 97 aa18.11■□□□□ 0.49
SF3B2-202ENST00000524475 PTPRAP18433 802 aa18.11■□□□□ 0.49
SF3B2-202ENST00000524475 SDSP20132 328 aa18.11■□□□□ 0.49
SF3B2-202ENST00000524475 C12orf60Q5U649 245 aa18.11■□□□□ 0.49
SF3B2-202ENST00000524475 CNKSR2Q8WXI2 1034 aa18.11■□□□□ 0.49
SF3B2-202ENST00000524475 OTUD5Q96G74 571 aa18.11■□□□□ 0.49
SF3B2-202ENST00000524475 SEC62Q99442 399 aaKnown RBP18.11■□□□□ 0.49
SF3B2-202ENST00000524475 SWAP70Q9UH65 585 aa18.11■□□□□ 0.49
SF3B2-202ENST00000524475 PTPRFP10586 1907 aa18.1■□□□□ 0.49
SF3B2-202ENST00000524475 ROBO3Q96MS0 1386 aa18.1■□□□□ 0.49
SF3B2-202ENST00000524475 PATL2C9JE40 543 aaKnown RBP18.1■□□□□ 0.49
SF3B2-202ENST00000524475 CXCL11O14625 94 aa18.1■□□□□ 0.49
SF3B2-202ENST00000524475 IRF6O14896 467 aa18.1■□□□□ 0.49
SF3B2-202ENST00000524475 ASNSP08243 561 aa18.1■□□□□ 0.49
SF3B2-202ENST00000524475 RRP1BQ14684 758 aaKnown RBP18.1■□□□□ 0.49
SF3B2-202ENST00000524475 MCMDC2Q4G0Z9 681 aa18.1■□□□□ 0.49
SF3B2-202ENST00000524475 CFHR5Q9BXR6 569 aa18.1■□□□□ 0.49
SF3B2-202ENST00000524475 MYH8P13535 1937 aa18.1■□□□□ 0.49
SF3B2-202ENST00000524475 A0A0D9SFI3 127 aa18.09■□□□□ 0.49
SF3B2-202ENST00000524475 USP17L12C9JPN9 530 aa18.09■□□□□ 0.49
SF3B2-202ENST00000524475 USP17L21D6R901 530 aa18.09■□□□□ 0.49
SF3B2-202ENST00000524475 ALDH1A1P00352 501 aa18.09■□□□□ 0.49
SF3B2-202ENST00000524475 SHMT1P34896 483 aa18.09■□□□□ 0.49
SF3B2-202ENST00000524475 MKRN3Q13064 507 aaKnown RBP18.09■□□□□ 0.49
SF3B2-202ENST00000524475 SNAPC2Q13487 334 aa18.09■□□□□ 0.49
SF3B2-202ENST00000524475 CTR9Q6PD62 1173 aa18.09■□□□□ 0.49
SF3B2-202ENST00000524475 NACAP1Q9BZK3 213 aa18.09■□□□□ 0.49
SF3B2-202ENST00000524475 EPB41L4AQ9HCS5 686 aaPredicted RBP18.09■□□□□ 0.49
SF3B2-202ENST00000524475 ZCCHC17Q9NP64 241 aaKnown RBP18.09■□□□□ 0.49
SF3B2-202ENST00000524475 PPP4R2Q9NY27 417 aa18.09■□□□□ 0.49
SF3B2-202ENST00000524475 ZMYM6O95789 1325 aa18.08■□□□□ 0.49
SF3B2-202ENST00000524475 CETPP11597 493 aa18.08■□□□□ 0.48
SF3B2-202ENST00000524475 MFAP1P55081 439 aaKnown RBP18.08■□□□□ 0.48
SF3B2-202ENST00000524475 NMIQ13287 307 aaPredicted RBP18.08■□□□□ 0.48
SF3B2-202ENST00000524475 C16orf86Q6ZW13 317 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms