RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 FGFR2P21802 821 aa21.97■■□□□ 1.11
PVT1-220ENST00000524165 PRDX5P30044 214 aa21.97■■□□□ 1.11
PVT1-220ENST00000524165 CCDC84Q86UT8 332 aaPredicted RBP21.97■■□□□ 1.11
PVT1-220ENST00000524165 ZSCAN29Q8IWY8 852 aaPredicted RBP21.97■■□□□ 1.11
PVT1-220ENST00000524165 SUCLG2Q96I99 432 aa21.97■■□□□ 1.11
PVT1-220ENST00000524165 TBC1D2Q9BYX2 928 aa21.97■■□□□ 1.11
PVT1-220ENST00000524165 SENP6Q9GZR1 1112 aaPredicted RBP21.97■■□□□ 1.11
PVT1-220ENST00000524165 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.97■■□□□ 1.11
PVT1-220ENST00000524165 RFX7Q2KHR2 1363 aa21.97■■□□□ 1.11
PVT1-220ENST00000524165 TMEM265A0A087WTH1 108 aa21.96■■□□□ 1.11
PVT1-220ENST00000524165 ALDH1L1O75891 902 aa21.96■■□□□ 1.11
PVT1-220ENST00000524165 CCND3P30281 292 aaPredicted RBP21.96■■□□□ 1.11
PVT1-220ENST00000524165 PUM3Q15397 648 aaKnown RBP21.96■■□□□ 1.11
PVT1-220ENST00000524165 DDTLA6NHG4 134 aaPredicted RBP21.95■■□□□ 1.1
PVT1-220ENST00000524165 LDHBP07195 334 aaKnown RBP21.95■■□□□ 1.1
PVT1-220ENST00000524165 SPP2Q13103 211 aa21.95■■□□□ 1.1
PVT1-220ENST00000524165 TBC1D12O60347 775 aa21.94■■□□□ 1.1
PVT1-220ENST00000524165 HOXD11P31277 338 aaPredicted RBP21.94■■□□□ 1.1
PVT1-220ENST00000524165 C9orf50Q5SZB4 431 aa21.94■■□□□ 1.1
PVT1-220ENST00000524165 ZNF280CQ8ND82 737 aa21.94■■□□□ 1.1
PVT1-220ENST00000524165 USP6NLQ92738 828 aa21.94■■□□□ 1.1
PVT1-220ENST00000524165 RLFQ13129 1914 aa21.94■■□□□ 1.1
PVT1-220ENST00000524165 BDP1A6H8Y1 2624 aa21.93■■□□□ 1.1
PVT1-220ENST00000524165 SLURP2P0DP57 97 aa21.93■■□□□ 1.1
PVT1-220ENST00000524165 HMGCS2P54868 508 aa21.93■■□□□ 1.1
PVT1-220ENST00000524165 PDE3AQ14432 1141 aa21.93■■□□□ 1.1
PVT1-220ENST00000524165 RABL6Q3YEC7 729 aaPredicted RBP21.93■■□□□ 1.1
PVT1-220ENST00000524165 SH3D19Q5HYK7 790 aa21.93■■□□□ 1.1
PVT1-220ENST00000524165 SALL1Q9NSC2 1324 aa21.92■■□□□ 1.1
PVT1-220ENST00000524165 MAPK4P31152 587 aa21.92■■□□□ 1.1
PVT1-220ENST00000524165 CCDC27Q2M243 656 aa21.92■■□□□ 1.1
PVT1-220ENST00000524165 OSBPL5Q9H0X9 879 aaPredicted RBP21.92■■□□□ 1.1
PVT1-220ENST00000524165 IL16Q14005 1332 aa21.91■■□□□ 1.1
PVT1-220ENST00000524165 VAMP4O75379 141 aa21.91■■□□□ 1.1
PVT1-220ENST00000524165 RGS2P41220 211 aa21.91■■□□□ 1.1
PVT1-220ENST00000524165 GPRC5AQ8NFJ5 357 aa21.91■■□□□ 1.1
PVT1-220ENST00000524165 SRCIN1Q9C0H9 1055 aa21.91■■□□□ 1.1
PVT1-220ENST00000524165 UTYO14607 1347 aa21.9■■□□□ 1.1
PVT1-220ENST00000524165 GAKO14976 1311 aa21.9■■□□□ 1.1
PVT1-220ENST00000524165 SLC5A1P13866 664 aa21.9■■□□□ 1.1
PVT1-220ENST00000524165 ATN1P54259 1190 aaPredicted RBP21.9■■□□□ 1.1
PVT1-220ENST00000524165 RTP1P59025 263 aa21.9■■□□□ 1.1
PVT1-220ENST00000524165 CCL14Q16627 93 aa21.9■■□□□ 1.1
PVT1-220ENST00000524165 LPIN2Q92539 896 aa21.9■■□□□ 1.1
PVT1-220ENST00000524165 APBA2Q99767 749 aa21.9■■□□□ 1.1
PVT1-220ENST00000524165 BICC1Q9H694 974 aaKnown RBP21.9■■□□□ 1.1
PVT1-220ENST00000524165 DNM1LO00429 736 aa21.89■■□□□ 1.09
PVT1-220ENST00000524165 MSCO60682 206 aa21.89■■□□□ 1.09
PVT1-220ENST00000524165 NBPF7P0C2Y1 421 aaPredicted RBP21.89■■□□□ 1.09
PVT1-220ENST00000524165 IRX3P78415 501 aaPredicted RBP21.89■■□□□ 1.09
PVT1-220ENST00000524165 MORN1Q5T089 497 aa21.89■■□□□ 1.09
PVT1-220ENST00000524165 WWC1Q8IX03 1113 aa21.89■■□□□ 1.09
PVT1-220ENST00000524165 USP38Q8NB14 1042 aa21.89■■□□□ 1.09
PVT1-220ENST00000524165 DDX4Q9NQI0 724 aaKnown RBP21.89■■□□□ 1.09
PVT1-220ENST00000524165 HOXA7P31268 230 aaPredicted RBP21.88■■□□□ 1.09
PVT1-220ENST00000524165 MAP3K12Q12852 859 aa21.88■■□□□ 1.09
PVT1-220ENST00000524165 ATXN2LQ8WWM7 1075 aaKnown RBP21.88■■□□□ 1.09
PVT1-220ENST00000524165 LPAR1Q92633 364 aa21.88■■□□□ 1.09
PVT1-220ENST00000524165 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.88■■□□□ 1.093e-9■■■■□ 25.5
PVT1-220ENST00000524165 TXNRD2Q9NNW7 524 aa21.88■■□□□ 1.09
PVT1-220ENST00000524165 USP17L5A8MUK1 530 aa21.87■■□□□ 1.09
PVT1-220ENST00000524165 GPR142Q7Z601 462 aa21.87■■□□□ 1.09
PVT1-220ENST00000524165 ANKRD44Q8N8A2 993 aa21.87■■□□□ 1.09
PVT1-220ENST00000524165 P2RX7Q99572 595 aaKnown RBP21.87■■□□□ 1.09
PVT1-220ENST00000524165 DDX20Q9UHI6 824 aaKnown RBP21.87■■□□□ 1.09
PVT1-220ENST00000524165 ATP11BQ9Y2G3 1177 aa21.87■■□□□ 1.09
PVT1-220ENST00000524165 HERVK_113P62684 666 aa21.86■■□□□ 1.09
PVT1-220ENST00000524165 PICALMQ13492 652 aa21.86■■□□□ 1.09
PVT1-220ENST00000524165 KLHDC4Q8TBB5 520 aa21.86■■□□□ 1.09
PVT1-220ENST00000524165 BADQ92934 168 aa21.86■■□□□ 1.09
PVT1-220ENST00000524165 AS3MTQ9HBK9 375 aa21.86■■□□□ 1.09
PVT1-220ENST00000524165 GNL3LQ9NVN8 582 aaKnown RBP21.86■■□□□ 1.09
PVT1-220ENST00000524165 FANCIQ9NVI1 1328 aa21.85■■□□□ 1.09
PVT1-220ENST00000524165 SEMA3EO15041 775 aa21.85■■□□□ 1.09
PVT1-220ENST00000524165 NPM3O75607 178 aaKnown RBP21.85■■□□□ 1.09
PVT1-220ENST00000524165 CAP2P40123 477 aa21.85■■□□□ 1.09
PVT1-220ENST00000524165 MFSD14CQ5VZR4 134 aa21.85■■□□□ 1.09
PVT1-220ENST00000524165 SLC4A10Q6U841 1118 aa21.85■■□□□ 1.09
PVT1-220ENST00000524165 PLEKHH3Q7Z736 793 aa21.85■■□□□ 1.09
PVT1-220ENST00000524165 CCAR1Q8IX12 1150 aaKnown RBP21.85■■□□□ 1.09
PVT1-220ENST00000524165 SLF2Q8IX21 1173 aa21.85■■□□□ 1.09
PVT1-220ENST00000524165 ZGPATQ8N5A5 531 aaKnown RBP21.85■■□□□ 1.09
PVT1-220ENST00000524165 FAM163AQ96GL9 167 aaPredicted RBP21.85■■□□□ 1.09
PVT1-220ENST00000524165 RBPJLQ9UBG7 517 aa21.85■■□□□ 1.09
PVT1-220ENST00000524165 DENND2AQ9ULE3 1009 aa21.85■■□□□ 1.09
PVT1-220ENST00000524165 ZBTB22O15209 634 aa21.84■■□□□ 1.09
PVT1-220ENST00000524165 PEX10O60683 326 aa21.84■■□□□ 1.09
PVT1-220ENST00000524165 ERVK-9P63128 1117 aa21.84■■□□□ 1.09
PVT1-220ENST00000524165 ERVK-24P63145 666 aa21.84■■□□□ 1.09
PVT1-220ENST00000524165 GRIN2CQ14957 1233 aa21.84■■□□□ 1.09
PVT1-220ENST00000524165 GTF3C2Q8WUA4 911 aaPredicted RBP21.84■■□□□ 1.09
PVT1-220ENST00000524165 PORCNQ9H237 461 aa21.84■■□□□ 1.09
PVT1-220ENST00000524165 FAM196BA6NMK8 535 aa21.83■■□□□ 1.09
PVT1-220ENST00000524165 MAP2K5Q13163 448 aa21.83■■□□□ 1.09
PVT1-220ENST00000524165 Q3C1V9 767 aa21.83■■□□□ 1.09
PVT1-220ENST00000524165 SLC39A5Q6ZMH5 540 aa21.83■■□□□ 1.09
PVT1-220ENST00000524165 ASB2Q96Q27 587 aa21.83■■□□□ 1.09
PVT1-220ENST00000524165 WDR18Q9BV38 432 aa21.83■■□□□ 1.09
PVT1-220ENST00000524165 PRDM5Q9NQX1 630 aaPredicted RBP21.83■■□□□ 1.09
PVT1-220ENST00000524165 TMOD4Q9NZQ9 345 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms