RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 NCAPH2Q6IBW4 605 aa18.21■□□□□ 0.51
PCDHA3-201ENST00000522353 TMEM110-MUSTN1A8MSY1 372 aa18.21■□□□□ 0.51
PCDHA3-201ENST00000522353 MCTP2Q6DN12 878 aa18.21■□□□□ 0.51
PCDHA3-201ENST00000522353 NLRX1Q86UT6 975 aa18.21■□□□□ 0.51
PCDHA3-201ENST00000522353 DCPSQ96C86 337 aaKnown RBP18.21■□□□□ 0.51
PCDHA3-201ENST00000522353 DNM3Q9UQ16 869 aa18.21■□□□□ 0.51
PCDHA3-201ENST00000522353 CALUO43852 315 aaPredicted RBP18.21■□□□□ 0.51
PCDHA3-201ENST00000522353 FAM160A1Q05DH4 1040 aa18.21■□□□□ 0.51
PCDHA3-201ENST00000522353 ANO1Q5XXA6 986 aa18.21■□□□□ 0.51
PCDHA3-201ENST00000522353 PPM1EQ8WY54 764 aa18.21■□□□□ 0.51
PCDHA3-201ENST00000522353 NPHP4O75161 1426 aaPredicted RBP18.21■□□□□ 0.51
PCDHA3-201ENST00000522353 CCDC14Q49A88 953 aa18.21■□□□□ 0.5
PCDHA3-201ENST00000522353 TUBB4BP68371 445 aa18.2■□□□□ 0.5
PCDHA3-201ENST00000522353 CNGA4Q8IV77 575 aa18.2■□□□□ 0.5
PCDHA3-201ENST00000522353 MYL5Q02045 173 aa18.2■□□□□ 0.5
PCDHA3-201ENST00000522353 USH1GQ495M9 461 aa18.2■□□□□ 0.5
PCDHA3-201ENST00000522353 TMC4Q7Z404 712 aa18.2■□□□□ 0.5
PCDHA3-201ENST00000522353 FAM227BQ96M60 508 aa18.2■□□□□ 0.5
PCDHA3-201ENST00000522353 TXNDC16Q9P2K2 825 aa18.2■□□□□ 0.5
PCDHA3-201ENST00000522353 ARID4AP29374 1257 aaPredicted RBP18.2■□□□□ 0.5
PCDHA3-201ENST00000522353 SNX29Q8TEQ0 813 aa18.2■□□□□ 0.5
PCDHA3-201ENST00000522353 CFAP43Q8NDM7 1665 aa18.2■□□□□ 0.5
PCDHA3-201ENST00000522353 PLEKHG1Q9ULL1 1385 aa18.2■□□□□ 0.5
PCDHA3-201ENST00000522353 KRT5P13647 590 aa18.2■□□□□ 0.5
PCDHA3-201ENST00000522353 NOLC1Q14978 699 aaKnown RBP eCLIP18.2■□□□□ 0.5
PCDHA3-201ENST00000522353 MTUS1Q9ULD2 1270 aa18.2■□□□□ 0.5
PCDHA3-201ENST00000522353 CTAGE9A4FU28 777 aa18.19■□□□□ 0.5
PCDHA3-201ENST00000522353 LPXNO60711 386 aa18.19■□□□□ 0.5
PCDHA3-201ENST00000522353 CTDSPL2Q05D32 466 aa18.19■□□□□ 0.5
PCDHA3-201ENST00000522353 DSCC1Q9BVC3 393 aa18.19■□□□□ 0.5
PCDHA3-201ENST00000522353 ARFGAP3Q9NP61 516 aa18.19■□□□□ 0.5
PCDHA3-201ENST00000522353 PNMA6EA0A0J9YXQ4 647 aa18.19■□□□□ 0.5
PCDHA3-201ENST00000522353 REXO1Q8N1G1 1221 aaKnown RBP18.19■□□□□ 0.5
PCDHA3-201ENST00000522353 STMN4Q9H169 189 aaPredicted RBP18.19■□□□□ 0.5
PCDHA3-201ENST00000522353 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.19■□□□□ 0.5
PCDHA3-201ENST00000522353 NDC80O14777 642 aa18.19■□□□□ 0.5
PCDHA3-201ENST00000522353 USPL1Q5W0Q7 1092 aa18.19■□□□□ 0.5
PCDHA3-201ENST00000522353 MAK16Q9BXY0 300 aaKnown RBP18.19■□□□□ 0.5
PCDHA3-201ENST00000522353 ATP2A2P16615 1042 aaKnown RBP18.18■□□□□ 0.5
PCDHA3-201ENST00000522353 NOC4LQ9BVI4 516 aaKnown RBP18.18■□□□□ 0.5
PCDHA3-201ENST00000522353 KCNH3Q9ULD8 1083 aa18.18■□□□□ 0.5
PCDHA3-201ENST00000522353 MAP3K15Q6ZN16 1313 aa18.18■□□□□ 0.5
PCDHA3-201ENST00000522353 PLXNC1O60486 1568 aa18.18■□□□□ 0.5
PCDHA3-201ENST00000522353 KIFC2Q96AC6 838 aa18.18■□□□□ 0.5
PCDHA3-201ENST00000522353 ARHGEF6Q15052 776 aa18.18■□□□□ 0.5
PCDHA3-201ENST00000522353 IL17REQ8NFR9 667 aa18.18■□□□□ 0.5
PCDHA3-201ENST00000522353 CPA1P15085 419 aa18.18■□□□□ 0.5
PCDHA3-201ENST00000522353 PPARAQ07869 468 aa18.18■□□□□ 0.5
PCDHA3-201ENST00000522353 C6orf163Q5TEZ5 329 aa18.18■□□□□ 0.5
PCDHA3-201ENST00000522353 A0A1B0GVL5 298 aa18.17■□□□□ 0.5
PCDHA3-201ENST00000522353 CUTAO60888 179 aa18.17■□□□□ 0.5
PCDHA3-201ENST00000522353 IL6STP40189 918 aaPredicted RBP18.17■□□□□ 0.5
PCDHA3-201ENST00000522353 TBC1D8BQ0IIM8 1120 aa18.17■□□□□ 0.5
PCDHA3-201ENST00000522353 OTUD7BQ6GQQ9 843 aa18.17■□□□□ 0.5
PCDHA3-201ENST00000522353 KIAA0825Q8IV33 1275 aa18.17■□□□□ 0.5
PCDHA3-201ENST00000522353 ATP8A2Q9NTI2 1148 aa18.17■□□□□ 0.5
PCDHA3-201ENST00000522353 CFAP74Q9C0B2 1584 aa18.17■□□□□ 0.5
PCDHA3-201ENST00000522353 KDRP35968 1356 aa18.17■□□□□ 0.5
PCDHA3-201ENST00000522353 USP17L12C9JPN9 530 aa18.17■□□□□ 0.5
PCDHA3-201ENST00000522353 USP17L21D6R901 530 aa18.17■□□□□ 0.5
PCDHA3-201ENST00000522353 DDX39AO00148 427 aaKnown RBP18.17■□□□□ 0.5
PCDHA3-201ENST00000522353 GAS8O95995 478 aa18.17■□□□□ 0.5
PCDHA3-201ENST00000522353 CALCRLQ16602 461 aa18.17■□□□□ 0.5
PCDHA3-201ENST00000522353 GIMAP7Q8NHV1 300 aa18.17■□□□□ 0.5
PCDHA3-201ENST00000522353 HERC4Q5GLZ8 1057 aaPredicted RBP18.17■□□□□ 0.5
PCDHA3-201ENST00000522353 ZNF710Q8N1W2 664 aa18.17■□□□□ 0.5
PCDHA3-201ENST00000522353 GLG1Q92896 1179 aa18.17■□□□□ 0.5
PCDHA3-201ENST00000522353 TTLL7Q6ZT98 887 aa18.16■□□□□ 0.5
PCDHA3-201ENST00000522353 RNF34Q969K3 372 aa18.16■□□□□ 0.5
PCDHA3-201ENST00000522353 PAGR1Q9BTK6 254 aa18.16■□□□□ 0.5
PCDHA3-201ENST00000522353 KIF24Q5T7B8 1368 aa18.16■□□□□ 0.5
PCDHA3-201ENST00000522353 JAKMIP2Q96AA8 810 aa18.16■□□□□ 0.5
PCDHA3-201ENST00000522353 SNX14Q9Y5W7 946 aa18.16■□□□□ 0.5
PCDHA3-201ENST00000522353 FAM169AQ9Y6X4 670 aa18.16■□□□□ 0.5
PCDHA3-201ENST00000522353 KRT27Q7Z3Y8 459 aa18.16■□□□□ 0.5
PCDHA3-201ENST00000522353 CSRNP2Q9H175 543 aa18.16■□□□□ 0.5
PCDHA3-201ENST00000522353 RNF216Q9NWF9 866 aaPredicted RBP18.16■□□□□ 0.5
PCDHA3-201ENST00000522353 CRKLP46109 303 aaKnown RBP18.16■□□□□ 0.5
PCDHA3-201ENST00000522353 OTUD6AQ7L8S5 288 aa18.16■□□□□ 0.5
PCDHA3-201ENST00000522353 OTUD7AQ8TE49 926 aaPredicted RBP18.16■□□□□ 0.5
PCDHA3-201ENST00000522353 TNFAIP3P21580 790 aa18.15■□□□□ 0.5
PCDHA3-201ENST00000522353 NCOA5Q9HCD5 579 aaKnown RBP18.15■□□□□ 0.5
PCDHA3-201ENST00000522353 LIN9Q5TKA1 542 aa18.15■□□□□ 0.5
PCDHA3-201ENST00000522353 RAB3IL1Q8TBN0 382 aa18.15■□□□□ 0.5
PCDHA3-201ENST00000522353 GYG1P46976 350 aa18.15■□□□□ 0.5
PCDHA3-201ENST00000522353 TSGA10Q9BZW7 698 aa18.15■□□□□ 0.5
PCDHA3-201ENST00000522353 NSRP1Q9H0G5 558 aaKnown RBP18.15■□□□□ 0.5
PCDHA3-201ENST00000522353 IFNKQ9P0W0 207 aa18.15■□□□□ 0.5
PCDHA3-201ENST00000522353 OPA1O60313 960 aa18.15■□□□□ 0.5
PCDHA3-201ENST00000522353 GTF2F1P35269 517 aaKnown RBP eCLIP18.15■□□□□ 0.5
PCDHA3-201ENST00000522353 CLCN1P35523 988 aa18.15■□□□□ 0.5
PCDHA3-201ENST00000522353 LEO1Q8WVC0 666 aaPredicted RBP18.15■□□□□ 0.5
PCDHA3-201ENST00000522353 NT5C3AQ9H0P0 336 aa18.15■□□□□ 0.5
PCDHA3-201ENST00000522353 MTRF1LQ9UGC7 380 aaKnown RBP18.15■□□□□ 0.5
PCDHA3-201ENST00000522353 MRPL11Q9Y3B7 192 aaKnown RBP18.15■□□□□ 0.5
PCDHA3-201ENST00000522353 ABCA5Q8WWZ7 1642 aa18.15■□□□□ 0.5
PCDHA3-201ENST00000522353 TRIM37O94972 964 aa18.14■□□□□ 0.5
PCDHA3-201ENST00000522353 TRIM14Q14142 442 aa18.14■□□□□ 0.5
PCDHA3-201ENST00000522353 IWS1Q96ST2 819 aa18.14■□□□□ 0.5
PCDHA3-201ENST00000522353 GUCA1BQ9UMX6 200 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms