RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 CTNND1O60716 968 aaKnown RBP13.95□□□□□ -0.18
CTNNA1-234ENST00000522227 DNAJB2P25686 324 aa13.95□□□□□ -0.18
CTNNA1-234ENST00000522227 METTL24Q5JXM2 366 aa13.95□□□□□ -0.18
CTNNA1-234ENST00000522227 GJC2Q5T442 439 aaPredicted RBP13.95□□□□□ -0.18
CTNNA1-234ENST00000522227 PROCA1Q8NCQ7 364 aaPredicted RBP13.95□□□□□ -0.18
CTNNA1-234ENST00000522227 SOCS4Q8WXH5 440 aa13.95□□□□□ -0.18
CTNNA1-234ENST00000522227 GAS2L1Q99501 681 aaPredicted RBP13.95□□□□□ -0.18
CTNNA1-234ENST00000522227 C1QTNF1Q9BXJ1 281 aa13.95□□□□□ -0.18
CTNNA1-234ENST00000522227 ZNF576Q9H609 170 aa13.95□□□□□ -0.18
CTNNA1-234ENST00000522227 ATRNL1Q5VV63 1379 aa13.95□□□□□ -0.18
CTNNA1-234ENST00000522227 PHIPQ8WWQ0 1821 aa13.94□□□□□ -0.18
CTNNA1-234ENST00000522227 CDH23Q9H251 3354 aa13.94□□□□□ -0.18
CTNNA1-234ENST00000522227 DDTLA6NHG4 134 aaPredicted RBP13.94□□□□□ -0.18
CTNNA1-234ENST00000522227 XRCC5P13010 732 aaKnown RBP13.94□□□□□ -0.18
CTNNA1-234ENST00000522227 PRDX5P30044 214 aa13.94□□□□□ -0.18
CTNNA1-234ENST00000522227 IRX3P78415 501 aaPredicted RBP13.94□□□□□ -0.18
CTNNA1-234ENST00000522227 PABPC4Q13310 644 aaKnown RBP eCLIP13.94□□□□□ -0.18
CTNNA1-234ENST00000522227 PICALMQ13492 652 aa13.94□□□□□ -0.18
CTNNA1-234ENST00000522227 DOCK1Q14185 1865 aa13.94□□□□□ -0.18
CTNNA1-234ENST00000522227 TRIM60Q495X7 471 aa13.94□□□□□ -0.18
CTNNA1-234ENST00000522227 LRRC24Q50LG9 513 aa13.94□□□□□ -0.18
CTNNA1-234ENST00000522227 DNAH12Q6ZR08 3092 aa13.94□□□□□ -0.18
CTNNA1-234ENST00000522227 TRMT44Q8IYL2 757 aaKnown RBP13.94□□□□□ -0.18
CTNNA1-234ENST00000522227 LRFN3Q9BTN0 628 aa13.94□□□□□ -0.18
CTNNA1-234ENST00000522227 CWC22Q9HCG8 908 aaKnown RBP13.94□□□□□ -0.18
CTNNA1-234ENST00000522227 SUGT1Q9Y2Z0 365 aa13.94□□□□□ -0.18
CTNNA1-234ENST00000522227 NDUFB9Q9Y6M9 179 aa13.94□□□□□ -0.18
CTNNA1-234ENST00000522227 DOCK2Q92608 1830 aa13.94□□□□□ -0.18
CTNNA1-234ENST00000522227 SYNGAP1Q96PV0 1343 aa13.93□□□□□ -0.18
CTNNA1-234ENST00000522227 TCF20Q9UGU0 1960 aaKnown RBP13.93□□□□□ -0.18
CTNNA1-234ENST00000522227 TRIM43BA6NCK2 446 aa13.93□□□□□ -0.18
CTNNA1-234ENST00000522227 APAF1O14727 1248 aa13.93□□□□□ -0.18
CTNNA1-234ENST00000522227 RGS2P41220 211 aa13.93□□□□□ -0.18
CTNNA1-234ENST00000522227 EPHB4P54760 987 aa13.93□□□□□ -0.18
CTNNA1-234ENST00000522227 CALD1Q05682 793 aaKnown RBP13.93□□□□□ -0.18
CTNNA1-234ENST00000522227 ANO1Q5XXA6 986 aa13.93□□□□□ -0.18
CTNNA1-234ENST00000522227 SLC39A5Q6ZMH5 540 aa13.93□□□□□ -0.18
CTNNA1-234ENST00000522227 TRIM43Q96BQ3 446 aaPredicted RBP13.93□□□□□ -0.18
CTNNA1-234ENST00000522227 PAGR1Q9BTK6 254 aa13.93□□□□□ -0.18
CTNNA1-234ENST00000522227 PRDM12Q9H4Q4 367 aa13.93□□□□□ -0.18
CTNNA1-234ENST00000522227 TXNRD2Q9NNW7 524 aa13.93□□□□□ -0.18
CTNNA1-234ENST00000522227 MORF4L1Q9UBU8 362 aa13.93□□□□□ -0.18
CTNNA1-234ENST00000522227 MROH5Q6ZUA9 1318 aa13.92□□□□□ -0.18
CTNNA1-234ENST00000522227 IGFBP4P22692 258 aa13.92□□□□□ -0.18
CTNNA1-234ENST00000522227 TWISTNBQ3B726 338 aaPredicted RBP13.92□□□□□ -0.18
CTNNA1-234ENST00000522227 NCBP3Q53F19 620 aaKnown RBP13.92□□□□□ -0.18
CTNNA1-234ENST00000522227 GPRC5AQ8NFJ5 357 aa13.92□□□□□ -0.18
CTNNA1-234ENST00000522227 P2RX7Q99572 595 aaKnown RBP13.92□□□□□ -0.18
CTNNA1-234ENST00000522227 PORCNQ9H237 461 aa13.92□□□□□ -0.18
CTNNA1-234ENST00000522227 EPHX3Q9H6B9 360 aa13.92□□□□□ -0.18
CTNNA1-234ENST00000522227 PDLIM7Q9NR12 457 aa13.92□□□□□ -0.18
CTNNA1-234ENST00000522227 DDX20Q9UHI6 824 aaKnown RBP13.92□□□□□ -0.18
CTNNA1-234ENST00000522227 FRMPD3Q5JV73 1810 aa13.92□□□□□ -0.18
CTNNA1-234ENST00000522227 Q3C1V9 767 aa13.91□□□□□ -0.18
CTNNA1-234ENST00000522227 MFSD14CQ5VZR4 134 aa13.91□□□□□ -0.18
CTNNA1-234ENST00000522227 GPR142Q7Z601 462 aa13.91□□□□□ -0.18
CTNNA1-234ENST00000522227 ZNF280CQ8ND82 737 aa13.91□□□□□ -0.18
CTNNA1-234ENST00000522227 WDR66Q8TBY9 1149 aa13.91□□□□□ -0.18
CTNNA1-234ENST00000522227 FERMT2Q96AC1 680 aa13.91□□□□□ -0.18
CTNNA1-234ENST00000522227 TIFAQ96CG3 184 aa13.91□□□□□ -0.18
CTNNA1-234ENST00000522227 APBA2Q99767 749 aa13.91□□□□□ -0.18
CTNNA1-234ENST00000522227 FLRT1Q9NZU1 646 aa13.91□□□□□ -0.18
CTNNA1-234ENST00000522227 GRM8O00222 908 aa13.9□□□□□ -0.18
CTNNA1-234ENST00000522227 DNM1LO00429 736 aa13.9□□□□□ -0.18
CTNNA1-234ENST00000522227 LDHBP07195 334 aaKnown RBP13.9□□□□□ -0.18
CTNNA1-234ENST00000522227 ITGB8P26012 769 aa13.9□□□□□ -0.18
CTNNA1-234ENST00000522227 MAPK4P31152 587 aa13.9□□□□□ -0.18
CTNNA1-234ENST00000522227 WDR78Q5VTH9 848 aa13.9□□□□□ -0.18
CTNNA1-234ENST00000522227 PLEKHH3Q7Z736 793 aa13.9□□□□□ -0.18
CTNNA1-234ENST00000522227 LPAR1Q92633 364 aa13.9□□□□□ -0.18
CTNNA1-234ENST00000522227 USP6NLQ92738 828 aa13.9□□□□□ -0.18
CTNNA1-234ENST00000522227 SUCLG2Q96I99 432 aa13.9□□□□□ -0.18
CTNNA1-234ENST00000522227 SNX27Q96L92 541 aa13.9□□□□□ -0.18
CTNNA1-234ENST00000522227 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.9□□□□□ -0.182e-13■■■□□ 15
CTNNA1-234ENST00000522227 DDX4Q9NQI0 724 aaKnown RBP13.9□□□□□ -0.18
CTNNA1-234ENST00000522227 C9orf78Q9NZ63 289 aaPredicted RBP13.9□□□□□ -0.18
CTNNA1-234ENST00000522227 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.89□□□□□ -0.19
CTNNA1-234ENST00000522227 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.89□□□□□ -0.19
CTNNA1-234ENST00000522227 KBTBD13C9JR72 458 aa13.89□□□□□ -0.19
CTNNA1-234ENST00000522227 ENTPD3O75355 529 aa13.89□□□□□ -0.19
CTNNA1-234ENST00000522227 IFIT1P09914 478 aaKnown RBP13.89□□□□□ -0.19
CTNNA1-234ENST00000522227 HERVK_113P62684 666 aa13.89□□□□□ -0.19
CTNNA1-234ENST00000522227 MORN1Q5T089 497 aa13.89□□□□□ -0.19
CTNNA1-234ENST00000522227 BEND3Q5T5X7 828 aa13.89□□□□□ -0.19
CTNNA1-234ENST00000522227 CCDC129Q6ZRS4 1044 aa13.89□□□□□ -0.19
CTNNA1-234ENST00000522227 MICALL1Q8N3F8 863 aa13.89□□□□□ -0.19
CTNNA1-234ENST00000522227 EDC3Q96F86 508 aaKnown RBP13.89□□□□□ -0.19
CTNNA1-234ENST00000522227 LOC285556D6RIA3 1793 aa13.88□□□□□ -0.19
CTNNA1-234ENST00000522227 FAM86C2PA6NEL3 165 aa13.88□□□□□ -0.19
CTNNA1-234ENST00000522227 GRXCR1A8MXD5 290 aa13.88□□□□□ -0.19
CTNNA1-234ENST00000522227 PDE8BO95263 885 aa13.88□□□□□ -0.19
CTNNA1-234ENST00000522227 CYP2C19P33261 490 aa13.88□□□□□ -0.19
CTNNA1-234ENST00000522227 PBX2P40425 430 aa13.88□□□□□ -0.19
CTNNA1-234ENST00000522227 ADCYAP1R1P41586 468 aa13.88□□□□□ -0.19
CTNNA1-234ENST00000522227 MAP3K10Q02779 954 aa13.88□□□□□ -0.19
CTNNA1-234ENST00000522227 MAP2K5Q13163 448 aa13.88□□□□□ -0.19
CTNNA1-234ENST00000522227 MTMR2Q13614 643 aa13.88□□□□□ -0.19
CTNNA1-234ENST00000522227 KLHDC4Q8TBB5 520 aa13.88□□□□□ -0.19
CTNNA1-234ENST00000522227 RBPJLQ9UBG7 517 aa13.88□□□□□ -0.19
CTNNA1-234ENST00000522227 USP17L5A8MUK1 530 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms