RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 ALDH1A1P00352 501 aa19.63■□□□□ 0.73
TNPO1-212ENST00000520850 HLA-DOAP06340 250 aa19.63■□□□□ 0.73
TNPO1-212ENST00000520850 INPP5BP32019 993 aa19.63■□□□□ 0.73
TNPO1-212ENST00000520850 PPIL2Q13356 520 aa19.63■□□□□ 0.73
TNPO1-212ENST00000520850 PLEKHM2Q8IWE5 1019 aa19.63■□□□□ 0.73
TNPO1-212ENST00000520850 APPBP2Q92624 585 aa19.63■□□□□ 0.73
TNPO1-212ENST00000520850 MS4A4AQ96JQ5 239 aa19.63■□□□□ 0.73
TNPO1-212ENST00000520850 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.63■□□□□ 0.73
TNPO1-212ENST00000520850 PRDM10Q9NQV6 1147 aa19.63■□□□□ 0.73
TNPO1-212ENST00000520850 FOXN1O15353 648 aa19.62■□□□□ 0.73
TNPO1-212ENST00000520850 GJA5P36382 358 aa19.62■□□□□ 0.73
TNPO1-212ENST00000520850 GTF2A2P52657 109 aa19.62■□□□□ 0.73
TNPO1-212ENST00000520850 SCYL3Q8IZE3 742 aa19.62■□□□□ 0.73
TNPO1-212ENST00000520850 TBC1D2Q9BYX2 928 aa19.62■□□□□ 0.73
TNPO1-212ENST00000520850 PUS7LQ9H0K6 701 aaKnown RBP19.62■□□□□ 0.73
TNPO1-212ENST00000520850 DCP1AQ9NPI6 582 aaPredicted RBP19.62■□□□□ 0.73
TNPO1-212ENST00000520850 PALD1Q9ULE6 856 aa19.62■□□□□ 0.73
TNPO1-212ENST00000520850 NOM1Q5C9Z4 860 aaKnown RBP19.61■□□□□ 0.73
TNPO1-212ENST00000520850 GIMAP6Q6P9H5 292 aa19.61■□□□□ 0.73
TNPO1-212ENST00000520850 LCORLQ8N3X6 602 aa19.61■□□□□ 0.73
TNPO1-212ENST00000520850 RNF186Q9NXI6 227 aa19.61■□□□□ 0.73
TNPO1-212ENST00000520850 CXCL11O14625 94 aa19.6■□□□□ 0.73
TNPO1-212ENST00000520850 MBD4O95243 580 aa19.6■□□□□ 0.73
TNPO1-212ENST00000520850 GNAT2P19087 354 aa19.6■□□□□ 0.73
TNPO1-212ENST00000520850 CAP2P40123 477 aa19.6■□□□□ 0.73
TNPO1-212ENST00000520850 OTUD7BQ6GQQ9 843 aa19.6■□□□□ 0.73
TNPO1-212ENST00000520850 STRBPQ96SI9 672 aaKnown RBP19.6■□□□□ 0.73
TNPO1-212ENST00000520850 ARMT1Q9H993 441 aa19.6■□□□□ 0.73
TNPO1-212ENST00000520850 ZCCHC17Q9NP64 241 aaKnown RBP19.6■□□□□ 0.73
TNPO1-212ENST00000520850 SERPINB13Q9UIV8 391 aa19.6■□□□□ 0.73
TNPO1-212ENST00000520850 KCNH4Q9UQ05 1017 aa19.6■□□□□ 0.73
TNPO1-212ENST00000520850 HSPA8P11142 646 aaKnown RBP19.59■□□□□ 0.73
TNPO1-212ENST00000520850 TATDN1Q6P1N9 297 aa19.59■□□□□ 0.73
TNPO1-212ENST00000520850 IFNL1Q8IU54 200 aa19.59■□□□□ 0.73
TNPO1-212ENST00000520850 OSBP2Q969R2 916 aa19.59■□□□□ 0.73
TNPO1-212ENST00000520850 PICK1Q9NRD5 415 aa19.59■□□□□ 0.73
TNPO1-212ENST00000520850 MYH1P12882 1939 aa19.59■□□□□ 0.73
TNPO1-212ENST00000520850 IRF6O14896 467 aa19.58■□□□□ 0.72
TNPO1-212ENST00000520850 CETPP11597 493 aa19.58■□□□□ 0.72
TNPO1-212ENST00000520850 PTPRAP18433 802 aa19.58■□□□□ 0.72
TNPO1-212ENST00000520850 GABPAQ06546 454 aa19.58■□□□□ 0.72
TNPO1-212ENST00000520850 SNAPC2Q13487 334 aa19.58■□□□□ 0.72
TNPO1-212ENST00000520850 SLFNL1Q499Z3 407 aa19.58■□□□□ 0.72
TNPO1-212ENST00000520850 ZMYM1Q5SVZ6 1142 aa19.58■□□□□ 0.72
TNPO1-212ENST00000520850 OTUD5Q96G74 571 aa19.58■□□□□ 0.72
TNPO1-212ENST00000520850 DDRGK1Q96HY6 314 aa19.58■□□□□ 0.72
TNPO1-212ENST00000520850 FSD1Q9BTV5 496 aa19.58■□□□□ 0.72
TNPO1-212ENST00000520850 CHGBP05060 677 aa19.57■□□□□ 0.72
TNPO1-212ENST00000520850 MKRN3Q13064 507 aaKnown RBP19.57■□□□□ 0.72
TNPO1-212ENST00000520850 CRACR2BQ8N4Y2 399 aaPredicted RBP19.57■□□□□ 0.72
TNPO1-212ENST00000520850 SDR42E1Q8WUS8 393 aa19.57■□□□□ 0.72
TNPO1-212ENST00000520850 CNKSR2Q8WXI2 1034 aa19.57■□□□□ 0.72
TNPO1-212ENST00000520850 DNAJC18Q9H819 358 aa19.57■□□□□ 0.72
TNPO1-212ENST00000520850 MCM9Q9NXL9 1143 aa19.57■□□□□ 0.72
TNPO1-212ENST00000520850 AFG3L2Q9Y4W6 797 aa19.57■□□□□ 0.72
TNPO1-212ENST00000520850 SIPA1L1O43166 1804 aa19.56■□□□□ 0.72
TNPO1-212ENST00000520850 TRPA1O75762 1119 aa19.56■□□□□ 0.72
TNPO1-212ENST00000520850 POLR3DP05423 398 aaPredicted RBP19.56■□□□□ 0.72
TNPO1-212ENST00000520850 CENPBP07199 599 aaPredicted RBP19.56■□□□□ 0.72
TNPO1-212ENST00000520850 ASNSP08243 561 aa19.56■□□□□ 0.72
TNPO1-212ENST00000520850 PLCD1P51178 756 aa19.56■□□□□ 0.72
TNPO1-212ENST00000520850 SBK1Q52WX2 424 aa19.56■□□□□ 0.72
TNPO1-212ENST00000520850 PTPN18Q99952 460 aa19.56■□□□□ 0.72
TNPO1-212ENST00000520850 TRIM34Q9BYJ4 488 aa19.56■□□□□ 0.72
TNPO1-212ENST00000520850 HELLSQ9NRZ9 838 aa19.56■□□□□ 0.72
TNPO1-212ENST00000520850 SAP30BPQ9UHR5 308 aaKnown RBP19.56■□□□□ 0.72
TNPO1-212ENST00000520850 SLC4A4Q9Y6R1 1079 aa19.56■□□□□ 0.72
TNPO1-212ENST00000520850 ZHX2Q9Y6X8 837 aa19.56■□□□□ 0.72
TNPO1-212ENST00000520850 PATL2C9JE40 543 aaKnown RBP19.55■□□□□ 0.72
TNPO1-212ENST00000520850 GPAA1O43292 621 aa19.55■□□□□ 0.72
TNPO1-212ENST00000520850 PRKAB2O43741 272 aa19.55■□□□□ 0.72
TNPO1-212ENST00000520850 SLURP2P0DP57 97 aa19.55■□□□□ 0.72
TNPO1-212ENST00000520850 DDX60LQ5H9U9 1706 aaKnown RBP19.55■□□□□ 0.72
TNPO1-212ENST00000520850 C12orf60Q5U649 245 aa19.55■□□□□ 0.72
TNPO1-212ENST00000520850 AMOTL1Q8IY63 956 aa19.55■□□□□ 0.72
TNPO1-212ENST00000520850 SWAP70Q9UH65 585 aa19.55■□□□□ 0.72
TNPO1-212ENST00000520850 CCL15-CCL14A0A0B4J2E2 113 aa19.54■□□□□ 0.72
TNPO1-212ENST00000520850 GSG1L2A8MUP6 293 aa19.54■□□□□ 0.72
TNPO1-212ENST00000520850 IGF2BP3O00425 579 aaKnown RBP eCLIP19.54■□□□□ 0.72
TNPO1-212ENST00000520850 LBX1P52954 281 aa19.54■□□□□ 0.72
TNPO1-212ENST00000520850 RRP1BQ14684 758 aaKnown RBP19.54■□□□□ 0.72
TNPO1-212ENST00000520850 CCL15Q16663 113 aa19.54■□□□□ 0.72
TNPO1-212ENST00000520850 ERICH6BQ5W0A0 696 aa19.54■□□□□ 0.72
TNPO1-212ENST00000520850 CENPQQ7L2Z9 268 aaPredicted RBP19.54■□□□□ 0.72
TNPO1-212ENST00000520850 BRI3BPQ8WY22 251 aa19.54■□□□□ 0.72
TNPO1-212ENST00000520850 WDR18Q9BV38 432 aa19.54■□□□□ 0.72
TNPO1-212ENST00000520850 DOCK1Q14185 1865 aa19.54■□□□□ 0.72
TNPO1-212ENST00000520850 A0A0G2JLL6 359 aaPredicted RBP19.53■□□□□ 0.72
TNPO1-212ENST00000520850 FAM196BA6NMK8 535 aa19.53■□□□□ 0.72
TNPO1-212ENST00000520850 USP17L5A8MUK1 530 aa19.53■□□□□ 0.72
TNPO1-212ENST00000520850 PDE4AP27815 886 aa19.53■□□□□ 0.72
TNPO1-212ENST00000520850 FASTKD5Q7L8L6 764 aaKnown RBP19.53■□□□□ 0.72
TNPO1-212ENST00000520850 PRRT2Q7Z6L0 340 aaPredicted RBP19.53■□□□□ 0.72
TNPO1-212ENST00000520850 AS3MTQ9HBK9 375 aa19.53■□□□□ 0.72
TNPO1-212ENST00000520850 ARPP21Q9UBL0 812 aaPredicted RBP19.53■□□□□ 0.72
TNPO1-212ENST00000520850 TRIM6-TRIM34B2RNG4 842 aa19.52■□□□□ 0.72
TNPO1-212ENST00000520850 USP17L12C9JPN9 530 aa19.52■□□□□ 0.72
TNPO1-212ENST00000520850 USP17L21D6R901 530 aa19.52■□□□□ 0.72
TNPO1-212ENST00000520850 M0R2C6 588 aa19.52■□□□□ 0.72
TNPO1-212ENST00000520850 HIP1O00291 1037 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms